HHsearch alignment for GI: 254781149 and conserved domain: cd03244
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=91.76 E-value=1.1 Score=24.86 Aligned_cols=114 Identities=14% Similarity=0.105 Sum_probs=64.6
Q ss_pred HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHH-C------CCC------------EEEECC------------
Q ss_conf 777776553016836887068741488999999999630-2------232------------364116------------
Q gi|254781149|r 130 QSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMAM-S------GHG------------VAFFSL------------ 178 (266)
Q Consensus 130 ~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a~-~------g~~------------Vl~fSl------------ 178 (266)
T Consensus 18 ~vL~~isl~i~~Ge~v~ivG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Tv~eN 97 (221)
T cd03244 18 PVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRISIIPQDPVLFSGTIRSN 97 (221)
T ss_pred CCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHEEEEECCCCCCCCCHHHH
T ss_conf 51754489986998999999999989999999967971898489999999661999999740799930352356008875
Q ss_pred -----CCCHHHHHHHHHHHHH--C-C--CCCCCCHHHCCC-CCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHH
Q ss_conf -----7534899999999630--2-2--323478555017-889989999999999999729954747998898999
Q gi|254781149|r 179 -----EMDREKLGARALSNLL--Y-P--SSSRIPYLNLIR-GEINQEQYRISQGICEKLQDFPLIIDDRPSPGIMEF 244 (266)
Q Consensus 179 -----EMs~~ql~~R~ls~~t--~-~--~~s~I~~~~l~~-g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~~i 244 (266)
T Consensus 98 i~~~~~~~~~~i~~-~l~~~~l~~~~~~~~~~l~~~~~~~~~~LSgGqkQrv~lARal~~~p~ililDEpts~LD~~ 173 (221)
T cd03244 98 LDPFGEYSDEELWQ-ALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKILVLDEATASVDPE 173 (221)
T ss_pred HCCCCCCCHHHHHH-HHHHHCHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH
T ss_conf 07102379999999-88751608999741044454703666779999999999999996599999997975679999