HHsearch alignment for GI: 254781149 and conserved domain: cd03248

>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=93.69  E-value=0.2  Score=30.16  Aligned_cols=113  Identities=12%  Similarity=0.038  Sum_probs=65.0

Q ss_pred             HHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH-HCC------CC------------E-------EEECC-----
Q ss_conf             77777655301683688706874148899999999963-022------32------------3-------64116-----
Q gi|254781149|r  130 QSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA-MSG------HG------------V-------AFFSL-----  178 (266)
Q Consensus       130 ~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a-~~g------~~------------V-------l~fSl-----  178 (266)
T Consensus        28 ~vL~~is~~i~~Ge~vaIvG~sGsGKSTL~~ll~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~eN  107 (226)
T cd03248          28 LVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHSKVSLVGQEPVLFARSLQDN  107 (226)
T ss_pred             EEEECEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHCEEEEECCCEECCCCHHHH
T ss_conf             43745389982999999999999849999999964546788789999999344899999732699924795767735666


Q ss_pred             -----C-CCHHHHHHHHHHHHHCCC--CC----CCCHHHCCCC-CCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHH
Q ss_conf             -----7-534899999999630223--23----4785550178-89989999999999999729954747998898999
Q gi|254781149|r  179 -----E-MDREKLGARALSNLLYPS--SS----RIPYLNLIRG-EINQEQYRISQGICEKLQDFPLIIDDRPSPGIMEF  244 (266)
Q Consensus       179 -----E-Ms~~ql~~R~ls~~t~~~--~s----~I~~~~l~~g-~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~~i  244 (266)
T Consensus       108 i~~g~~~~~~~~i~~~~--~~~~~~~~i~~l~~gl~t~i~~~g~~LSgGqkQRialARal~~~p~ililDEptSaLD~~  184 (226)
T cd03248         108 IAYGLQSCSFECVKEAA--QKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIRNPQVLILDEATSALDAE  184 (226)
T ss_pred             HHCCCCCCCHHHHHHHH--HHHCHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH
T ss_conf             63278999999999999--996614677626366640616848876999999999999997599999997976688999