HHsearch alignment for GI: 254781149 and conserved domain: cd03258

>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=91.61  E-value=1.2  Score=24.68  Aligned_cols=114  Identities=14%  Similarity=0.113  Sum_probs=68.3

Q ss_pred             HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH-HC------CC---------------CE-EEE---CC----
Q ss_conf             377777655301683688706874148899999999963-02------23---------------23-641---16----
Q gi|254781149|r  129 LQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA-MS------GH---------------GV-AFF---SL----  178 (266)
Q Consensus       129 ~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a-~~------g~---------------~V-l~f---Sl----  178 (266)
T Consensus        18 ~~al~~vsl~i~~Ge~~~ivG~SGsGKSTllr~i~gL~~p~sG~I~~~g~~i~~~~~~~~~~~Rr~ig~VFQ~~~L~~~~   97 (233)
T cd03258          18 VTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSSR   97 (233)
T ss_pred             EEEEECCEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHHHCCCCEEECCCCCCCCC
T ss_conf             99984828899999999998898058999999996799999808999999989799999999862587794377889988


Q ss_pred             -------------CCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHH
Q ss_conf             -------------753489999999963022323478555017889989999999999999729954747998898999
Q gi|254781149|r  179 -------------EMDREKLGARALSNLLYPSSSRIPYLNLIRGEINQEQYRISQGICEKLQDFPLIIDDRPSPGIMEF  244 (266)
Q Consensus       179 -------------EMs~~ql~~R~ls~~t~~~~s~I~~~~l~~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~~i  244 (266)
T Consensus        98 tv~~nv~~~l~~~~~~~~~~~~r~~~lL~~vgL~~~--~~~yP~eLSGGq~QRVaIARAL~~~P~lllaDEPTs~LD~~  174 (233)
T cd03258          98 TVFENVALPLEIAGVPKAEIEERVLELLELVGLEDK--ADAYPAQLSGGQKQRVGIARALANNPKVLLCDEATSALDPE  174 (233)
T ss_pred             CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHH--HHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHH
T ss_conf             399999999997499999999999999986799167--62696526778889999999983399899965976646988