HHsearch alignment for GI: 254781149 and conserved domain: cd03259

>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=94.09  E-value=0.39  Score=28.12  Aligned_cols=124  Identities=18%  Similarity=0.124  Sum_probs=71.9

Q ss_pred             HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH-H------CCCC----------EEEE----C--CCCCHHH
Q ss_conf             1377777655301683688706874148899999999963-0------2232----------3641----1--6753489
Q gi|254781149|r  128 GLQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA-M------SGHG----------VAFF----S--LEMDREK  184 (266)
Q Consensus       128 G~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a-~------~g~~----------Vl~f----S--lEMs~~q  184 (266)
T Consensus        12 ~~~al~~vs~~i~~Gei~~iiGpnGaGKSTl~~~i~Gl~~p~~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~l~~~ltv~e   91 (213)
T cd03259          12 SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVAE   91 (213)
T ss_pred             CEEEECCCEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCEECCCCCHHHCCEEEEECCCCCCCCCCHHH
T ss_conf             99998461779889989999999997399999999759998970899999998889977878699906986588981999


Q ss_pred             HHH---------------HHHHHHHCCCCCCCCH-HHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHH-----H
Q ss_conf             999---------------9999630223234785-550178899899999999999997299547479988989-----9
Q gi|254781149|r  185 LGA---------------RALSNLLYPSSSRIPY-LNLIRGEINQEQYRISQGICEKLQDFPLIIDDRPSPGIM-----E  243 (266)
Q Consensus       185 l~~---------------R~ls~~t~~~~s~I~~-~~l~~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~-----~  243 (266)
T Consensus        92 nl~~~~~~~~~~~~~~~~~~~~~l~~---~~l~~~~~~~~~~LSGG~kQrv~iAraL~~~P~illlDEPt~gLD~~~~~~  168 (213)
T cd03259          92 NIAFGLKLRGVPKAEIRARVRELLEL---VGLEGLLNRYPHELSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREE  168 (213)
T ss_pred             HHHHHHHHCCCCHHHHHHHHHHHHHH---CCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHH
T ss_conf             99889987599989999999999998---699647637703389899999999876227999999839864379999999


Q ss_pred             HHHHHHHHHHH
Q ss_conf             99999999999
Q gi|254781149|r  244 FVHVANGLRNK  254 (266)
Q Consensus       244 ira~aR~~k~k  254 (266)
T Consensus       169 i~~li~~l~~~  179 (213)
T cd03259         169 LREELKELQRE  179 (213)
T ss_pred             HHHHHHHHHHH
T ss_conf             99999999996