HHsearch alignment for GI: 254781149 and conserved domain: cd03260
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=93.96 E-value=0.39 Score=28.14 Aligned_cols=121 Identities=12% Similarity=0.020 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH------------HCC----------------------CCEE
Q ss_conf 377777655301683688706874148899999999963------------022----------------------3236
Q gi|254781149|r 129 LQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA------------MSG----------------------HGVA 174 (266)
Q Consensus 129 ~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a------------~~g----------------------~~Vl 174 (266)
T Consensus 13 ~~~L~~isl~i~~Ge~~~iiG~SGsGKSTll~~i~gL~~~~~~~p~~G~I~~~g~~i~~~~~~~~~~R~~ig~VfQ~~~- 91 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLELRRRVGMVFQKPN- 91 (227)
T ss_pred EEEEECEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCEECCCCCCCHHHHHHCCEEECCCCC-
T ss_conf 9888340678879989999999998199999999744502689981469999999998899587889628268764776-
Q ss_pred EECC--------------CCCHHHHHHHHHHHHHCCCCCCCCHHHCC---CCCCCHHHHHHHHHHHHHHHHCCCEEECCC
Q ss_conf 4116--------------75348999999996302232347855501---788998999999999999972995474799
Q gi|254781149|r 175 FFSL--------------EMDREKLGARALSNLLYPSSSRIPYLNLI---RGEINQEQYRISQGICEKLQDFPLIIDDRP 237 (266)
Q Consensus 175 ~fSl--------------EMs~~ql~~R~ls~~t~~~~s~I~~~~l~---~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~ 237 (266)
T Consensus 92 lf~~TV~eNi~~~l~~~~~~~~~~~~~~v~~~L~~---vgL~~~~~~~~~p~~LSGGq~QRvaIArAL~~~P~iLllDEP 168 (227)
T cd03260 92 PFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRK---AALWDEVKDRLHALGLSGGQQQRLCLARALANEPEVLLLDEP 168 (227)
T ss_pred CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH---CCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 67780999999999983899999999999999987---799758844568022899999999999998359999996898
Q ss_pred CCCHH-----HHHHHHHHHHH
Q ss_conf 88989-----99999999999
Q gi|254781149|r 238 SPGIM-----EFVHVANGLRN 253 (266)
Q Consensus 238 ~~ti~-----~ira~aR~~k~ 253 (266)
T Consensus 169 Ts~LD~~~~~~i~~li~~l~~ 189 (227)
T cd03260 169 TSALDPISTAKIEELIAELKK 189 (227)
T ss_pred CCCCCHHHHHHHHHHHHHHHH
T ss_conf 765798999999999999966