HHsearch alignment for GI: 254781149 and conserved domain: cd03265

>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=92.95  E-value=0.54  Score=27.16  Aligned_cols=128  Identities=13%  Similarity=0.060  Sum_probs=76.8

Q ss_pred             HHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH-HCC------C-----------CEEEE------CCCCCHH
Q ss_conf             1377777655301683688706874148899999999963-022------3-----------23641------1675348
Q gi|254781149|r  128 GLQSVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA-MSG------H-----------GVAFF------SLEMDRE  183 (266)
Q Consensus       128 G~~~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a-~~g------~-----------~Vl~f------SlEMs~~  183 (266)
T Consensus        12 ~~~al~~is~~v~~Gei~gllGpNGAGKSTll~~i~Gl~~p~~G~i~i~G~~~~~~~~~~r~~ig~~pq~~~l~~~lTv~   91 (220)
T cd03265          12 DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELTGW   91 (220)
T ss_pred             CEEEECCCEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEECCCCHHHHHHCCEEEECCCCCCCCCCHH
T ss_conf             99998582679889839999999987199999999769788962899999998839899982838990787679889999


Q ss_pred             HHHHHHHHHHHCCCCC-----------CCC---HHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCH-----HHH
Q ss_conf             9999999963022323-----------478---555017889989999999999999729954747998898-----999
Q gi|254781149|r  184 KLGARALSNLLYPSSS-----------RIP---YLNLIRGEINQEQYRISQGICEKLQDFPLIIDDRPSPGI-----MEF  244 (266)
Q Consensus       184 ql~~R~ls~~t~~~~s-----------~I~---~~~l~~g~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti-----~~i  244 (266)
T Consensus        92 e~l-~~~~~l~g~~~~~~~~~~~~ll~~~~L~~~~~~~~~~LS~G~kqrv~ia~Al~~~P~lliLDEPt~gLDp~~~~~i  170 (220)
T cd03265          92 ENL-YIHARLYGVPGAERRERIDELLDFVGLLEAADRLVKTYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHV  170 (220)
T ss_pred             HHH-HHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHH
T ss_conf             999-9999981999999999999999977996797370434799999999999998569998998088668899999999


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             999999999947
Q gi|254781149|r  245 VHVANGLRNKHT  256 (266)
Q Consensus       245 ra~aR~~k~k~~  256 (266)
T Consensus       171 ~~~i~~l~~~~g  182 (220)
T cd03265         171 WEYIEKLKEEFG  182 (220)
T ss_pred             HHHHHHHHHHCC
T ss_conf             999999998389