HHsearch alignment for GI: 254781149 and conserved domain: cd03288
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=92.97 E-value=0.21 Score=29.97 Aligned_cols=113 Identities=15% Similarity=0.140 Sum_probs=65.7
Q ss_pred HHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHH-HCC--------------------------CCEEEE-----C-
Q ss_conf 7777655301683688706874148899999999963-022--------------------------323641-----1-
Q gi|254781149|r 131 SVDHLMGGVQLRELILIGARPSMGKTTFALSTALHMA-MSG--------------------------HGVAFF-----S- 177 (266)
Q Consensus 131 ~LD~~~gG~~~g~LiviaaRP~mGKTa~alnia~~~a-~~g--------------------------~~Vl~f-----S- 177 (266)
T Consensus 36 vL~~inl~I~~Ge~vaIvG~sGsGKSTL~~ll~gl~~p~~G~I~idg~di~~~~~~~lr~~i~~v~Q~~~lf~~Ti~~Ni 115 (257)
T cd03288 36 VLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRSRLSIILQDPILFSGSIRFNL 115 (257)
T ss_pred CEECEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCEEHHHCCHHHHHHHEEEEECCCCCCCCHHHHCC
T ss_conf 31053899879999999999998199999999605667888899998996879999997505799456734361355413
Q ss_pred ---CCCCHHHHHHHHHHH--HHCCC---CCCCCHHHCCCC-CCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHH
Q ss_conf ---675348999999996--30223---234785550178-89989999999999999729954747998898999
Q gi|254781149|r 178 ---LEMDREKLGARALSN--LLYPS---SSRIPYLNLIRG-EINQEQYRISQGICEKLQDFPLIIDDRPSPGIMEF 244 (266)
Q Consensus 178 ---lEMs~~ql~~R~ls~--~t~~~---~s~I~~~~l~~g-~l~~~e~~~i~~a~~~l~~~pl~IdD~~~~ti~~i 244 (266)
T Consensus 116 ~~~~~~~~~~i~~-al~~~~l~~~i~~lp~gl~t~l~~~g~~LSgGQrQri~lARAll~~~~iliLDEpts~LD~~ 190 (257)
T cd03288 116 DPECKCTDDRLWE-ALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMA 190 (257)
T ss_pred CCCCCCCHHHHHH-HHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH
T ss_conf 7566768999999-99996237999737589851746876836999999999999995599999995876678999