HHsearch alignment for GI: 254781149 and conserved domain: pfam02492

>pfam02492 cobW CobW/HypB/UreG, nucleotide-binding domain. This domain is found in HypB, a hydrogenase expression / formation protein, and UreG a urease accessory protein. Both these proteins contain a P-loop nucleotide binding motif. HypB has GTPase activity and is a guanine nucleotide binding protein. It is not known whether UreG binds GTP or some other nucleotide. Both enzymes are involved in nickel binding. HypB can store nickel and is required for nickel dependent hydrogenase expression. UreG is required for functional incorporation of the urease nickel metallocenter. GTP hydrolysis may required by these proteins for nickel incorporation into other nickel proteins. This family of domains also contains P47K, a Pseudomonas chlororaphis protein needed for nitrile hydratase expression, and the cobW gene product, which may be involved in cobalamin biosynthesis in Pseudomonas denitrificans.
Probab=95.91  E-value=0.059  Score=33.85  Aligned_cols=95  Identities=16%  Similarity=0.116  Sum_probs=61.8

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCC---CHHHHHHHH
Q ss_conf             68870687414889999999996302232364116753489999999963022323478555017889---989999999
Q gi|254781149|r  144 LILIGARPSMGKTTFALSTALHMAMSGHGVAFFSLEMDREKLGARALSNLLYPSSSRIPYLNLIRGEI---NQEQYRISQ  220 (266)
Q Consensus       144 LiviaaRP~mGKTa~alnia~~~a~~g~~Vl~fSlEMs~~ql~~R~ls~~t~~~~s~I~~~~l~~g~l---~~~e~~~i~  220 (266)
T Consensus         2 v~iitGFLGsGKTTll~~ll~~-~~~~~~~avI~Ne~g~~~iD~~ll~~------~~~~v~el~~GciCc~~~~d~~~~l   74 (174)
T pfam02492         2 VTVLTGFLGSGKTTLLEHLLRD-NREGLKIAVIVNDFGETGIDAELLRE------TGAEIVELNNGCICCTIREDLSMVL   74 (174)
T ss_pred             EEEEECCCCCCHHHHHHHHHHH-CCCCCCEEEEEECCCCHHHHHHHHHH------CCCEEEEECCCCCCCCCCHHHHHHH
T ss_conf             6999348878899999999984-44898479999336530207999870------6961899748866454333699999


Q ss_pred             HHHHHHHHC-C--CEEECCCCCCHHHHH
Q ss_conf             999999729-9--547479988989999
Q gi|254781149|r  221 GICEKLQDF-P--LIIDDRPSPGIMEFV  245 (266)
Q Consensus       221 ~a~~~l~~~-p--l~IdD~~~~ti~~ir  245 (266)
T Consensus        75 ~~l~~~~~~~~d~iiIE~sGla~p~~i~  102 (174)
T pfam02492        75 EALLELKLPRLDLLFIETTGLACPAPVL  102 (174)
T ss_pred             HHHHHCCCCCCCEEEEECCCCCCHHHHH
T ss_conf             9998557899999999587667707777