HHsearch alignment for GI: 254781149 and conserved domain: pfam07728

>pfam07728 AAA_5 AAA domain (dynein-related subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.

Probab=92.59  E-value=0.12  Score=31.71  Aligned_cols=43  Identities=23%  Similarity=0.331  Sum_probs=31.2

Q ss_pred             EEEECCCCHHHHHHHHHHHHHHHHCCCCEE--EECCCCCHHHHHHHH
Q ss_conf             887068741488999999999630223236--411675348999999
Q gi|254781149|r  145 ILIGARPSMGKTTFALSTALHMAMSGHGVA--FFSLEMDREKLGARA  189 (266)
Q Consensus       145 iviaaRP~mGKTa~alnia~~~a~~g~~Vl--~fSlEMs~~ql~~R~  189 (266)
T Consensus         2 vll~Gp~G~GKT~la~~la~~l~--~~~~~~i~~~~~~~~~dl~G~~   46 (139)
T pfam07728         2 VLLVGPPGTGKSELAERLAAALS--NRPVFYVQLTRDTTEEDLKGRR   46 (139)
T ss_pred             EEEECCCCCHHHHHHHHHHHHCC--CCCCHHHCCCCCCCHHHCCCCE
T ss_conf             89998997569999999999807--9831112146556522205734