HHsearch alignment for GI: 254781149 and conserved domain: smart00487
>smart00487 DEXDc DEAD-like helicases superfamily.
Probab=90.24 E-value=0.83 Score=25.84 Aligned_cols=51 Identities=22% Similarity=0.122 Sum_probs=39.0
Q ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEECC-CCCHHHHHHHHHHHH
Q ss_conf 3688706874148899999999963022--32364116-753489999999963
Q gi|254781149|r 143 ELILIGARPSMGKTTFALSTALHMAMSG--HGVAFFSL-EMDREKLGARALSNL 193 (266)
Q Consensus 143 ~LiviaaRP~mGKTa~alnia~~~a~~g--~~Vl~fSl-EMs~~ql~~R~ls~~ 193 (266)
T Consensus 25 ~~~~i~~~tGsGKT~~~~~~~~~~~~~~~~~~~li~~P~~~l~~q~~~~~~~~~ 78 (201)
T smart00487 25 RDVILAAPTGSGKTLAALLPALEALKRGKGKRVLVLVPTRELAEQWAEELKKLG 78 (201)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCC
T ss_conf 988998999960999999999998633899759999085999999998860102