RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254781150|ref|YP_003065563.1| hypothetical protein CLIBASIA_05285 [Candidatus Liberibacter asiaticus str. psy62] (33 letters) >d2i5ia1 c.6.2.8 (A:2-262) Uncharacterized protein EF3048 {Enterococcus faecalis [TaxId: 1351]} Length = 261 Score = 24.3 bits (52), Expect = 3.3 Identities = 4/16 (25%), Positives = 7/16 (43%) Query: 9 RNGPIESVSLFVDMPY 24 + G + S + PY Sbjct: 27 KRGVVTSTTALPTSPY 42 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.320 0.138 0.421 Gapped Lambda K H 0.267 0.0532 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 120,300 Number of extensions: 2503 Number of successful extensions: 4 Number of sequences better than 10.0: 1 Number of HSP's gapped: 4 Number of HSP's successfully gapped: 1 Length of query: 33 Length of database: 2,407,596 Length adjustment: 7 Effective length of query: 26 Effective length of database: 2,311,486 Effective search space: 60098636 Effective search space used: 60098636 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 47 (22.3 bits)