RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= gi|254781154|ref|YP_003065567.1| hypothetical protein CLIBASIA_05305 [Candidatus Liberibacter asiaticus str. psy62] (65 letters) >gnl|CDD|149284 pfam08144, CPL, CPL (NUC119) domain. This C terminal domain is fund in Penguin-like proteins associated with Pumilio like repeats. Length = 148 Score = 24.8 bits (54), Expect = 5.5 Identities = 10/20 (50%), Positives = 11/20 (55%) Query: 36 LSALISSDKNITESGKEGIV 55 L LI DK E+GKEG Sbjct: 126 LKWLIEQDKKKKENGKEGCF 145 >gnl|CDD|182779 PRK10852, PRK10852, thiosulfate transporter subunit; Provisional. Length = 338 Score = 24.7 bits (54), Expect = 5.5 Identities = 9/22 (40%), Positives = 14/22 (63%) Query: 43 DKNITESGKEGIVKMDLSYVYT 64 DKN+ +G E K L+Y+Y+ Sbjct: 252 DKNVQANGTEKAAKAYLNYLYS 273 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.320 0.136 0.379 Gapped Lambda K H 0.267 0.0734 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 993,321 Number of extensions: 44397 Number of successful extensions: 79 Number of sequences better than 10.0: 1 Number of HSP's gapped: 79 Number of HSP's successfully gapped: 10 Length of query: 65 Length of database: 5,994,473 Length adjustment: 36 Effective length of query: 29 Effective length of database: 5,216,585 Effective search space: 151280965 Effective search space used: 151280965 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 50 (23.0 bits)