HHsearch alignment for GI: 254781158 and conserved domain: PRK00059
>PRK00059 prsA peptidylprolyl isomerase; Provisional.
Probab=100.00 E-value=0 Score=418.10 Aligned_cols=314 Identities=19% Similarity=0.270 Sum_probs=256.1
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEECCEECCHHHHHH--HHHHHHHHHHHHCCCCCCHHH---
Q ss_conf 876402268999999999999983131010367888428999987848999999--999999999987088999789---
Q gi|254781158|r 5 IRKASRTWVAKIFLVVLFVPFLIWGLSDALFSVSGSSTVVSVGRQKVPFSSFIN--SWKQELGMISQKIGFVVNSER--- 79 (631)
Q Consensus 5 iR~~~~s~~~~ii~~l~~~~f~~~g~~~~~~~~~~~~~va~V~g~~I~~~~f~~--~~~~~~~~~~~~~g~~~~~~~--- 79 (631)
T Consensus 1 ~~~~-~ki~~~~ii~~~~~~~vg~~~~~~~~~~~~~~~VA~Vng~~It~~e~~~~~~~~~~~~~l~~q~g~~~~~~~~~~ 79 (336)
T PRK00059 1 MKSA-KKIVASLLVGVFIFSAVGCNMVEKTPEAIAKTTVATVGGEKITRGDLDSDPSMKQVLEQLKSQYGDKYEKNEQVK 79 (336)
T ss_pred CCCH-HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 9507-999999999999999830253346766778964898999984899999999999999999987430135570018
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 98601389999999999999999998498248899999996347655421023989999999861100567767888775
Q gi|254781158|r 80 ARSVGLDKKILDNLVSGATLDQFIEDIGLEADHGRVWGEIARSPLFHGKDNKFSHDVFVSRLAREGINEKEYIDHYTKML 159 (631)
Q Consensus 80 ~~~~~l~~qvl~~li~~~ll~~~a~~~gi~vsd~~v~~~i~~~p~Fq~~~G~Fd~~~~~~~L~~~g~t~~~~~~~~~~~l 159 (631)
T Consensus 80 ~~~~~~r~qvL~~LI~~~Ll~q~A~~~gl~vsd~ev~~~I~~~~~~~~~~g~f~~~~y~~~L~~~g~t~~~~~~~~r~~l 159 (336)
T PRK00059 80 EQLKQQKKQILESLITEKVLLQKAKELKLIPSDEELNKEVDKQVNEIKKQYNNDEEKFEEALKQTGFTEETFKEYLKNQI 159 (336)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
T ss_conf 99999999999999999999999998699849999999999999999883799999999999986999999999999999
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 44455543014542200222334554321112333210000123456789889999976566655545443322221100
Q gi|254781158|r 160 SRTDVVGMFVGGMRPSNLLLDQAKRFYFENRSVDYIVLNNRHVPAIADPSNAVLTQWFEKYKDNYRAPEYKRISYILFDV 239 (631)
Q Consensus 160 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~i~~~~~~~~~~~~~~~~td~el~~yy~~nk~~f~~pe~~~i~yv~~~~ 239 (631)
T Consensus 160 ~~~~l~~~v~----------------------------------~~v~Vsd~Ei~~yY~~nk~~f~-------------- 191 (336)
T PRK00059 160 IIEKVINEVV----------------------------------KDVKVTDKDAQKYYDENKSTFT-------------- 191 (336)
T ss_pred HHHHHHHHHH----------------------------------CCCCCCHHHHHHHHHHHHHHHC--------------
T ss_conf 9999999974----------------------------------5686588999999999788733--------------
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC----CCCCCCCC
Q ss_conf 00000125788999875555455543321123788753000014788875303651478877520112----36524531
Q gi|254781158|r 240 HEKEKKIEISNDELQAEYEKNKEKYFSPEIRTVEQLVFPNQKEADEAFQSLKKGKKFIQLAEEQGKSL----SDISLGSF 315 (631)
Q Consensus 240 ~~~~~~~~vt~~ei~~~Y~~~~~~f~~pe~~~~~~i~~~~~~~A~~~~~~l~~g~~F~~la~~~~~~~----~~~~lg~~ 315 (631)
T Consensus 192 -------------------------~~p~~~~~~~Il~~~~~~A~~i~~~l~~G~dF~~lAk~~S~D~~s~~~gGdLG~~ 246 (336)
T PRK00059 192 -------------------------EKPNTVHLSHILVKTEEEAKKVKKRLDKGEDFAKVAKEVSQDPGSKDKGGDLGDV 246 (336)
T ss_pred -------------------------CCCCEEEEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf -------------------------7866588998887899999999999877998899999848995310148866640
Q ss_pred C--HHHCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6--23226756777642023667225678617721121102333013445543223333456799998888865565776
Q gi|254781158|r 316 S--KEYIPDVSLADSIFSLAKKGDFTPVIHGSFGYVIAHVSNIKPSFTVSFQEVKKDIANQMRITKASEKVKEDYKRLEE 393 (631)
Q Consensus 316 ~--~~~~~~~~~~~a~f~l~~~G~is~pv~t~~G~~iikv~~~~~~~~~~~~evk~~I~~~l~~~~a~~~~~~~~~~i~d 393 (631)
T Consensus 247 ~~~~~~~~-~~f~~a~f~L-k~GeiS~pV~t~~GyhIIkl~~~~~~~~~~feevk~~I~~~L~~qK~~~~~~e~~~~l~~ 324 (336)
T PRK00059 247 PYSDSNYD-KEFMDAAKAL-KEGEISAPVKTQFGYHIIKAIKKKEYPVKPFDSVKEQIKKQLLQEKQSEVFKKKIEEWKK 324 (336)
T ss_pred CCCCCCCC-HHHHHHHHHC-CCCCCCCCEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 26766556-6899999745-688868860668867999997215788999999999999999999999999999999997
Q ss_pred H
Q ss_conf 5
Q gi|254781158|r 394 F 394 (631)
Q Consensus 394 ~ 394 (631)
T Consensus 325 ~ 325 (336)
T PRK00059 325 D 325 (336)
T ss_pred H
T ss_conf 3