HHsearch alignment for GI: 254781158 and conserved domain: PRK02998
>PRK02998 prsA peptidylprolyl isomerase; Reviewed.
Probab=100.00 E-value=6.3e-33 Score=232.95 Aligned_cols=221 Identities=18% Similarity=0.320 Sum_probs=172.7
Q ss_pred CCEEEEECCEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 84289999878489999999999999999870889997899860138999999999999999999849824889999999
Q gi|254781158|r 40 SSTVVSVGRQKVPFSSFINSWKQELGMISQKIGFVVNSERARSVGLDKKILDNLVSGATLDQFIEDIGLEADHGRVWGEI 119 (631)
Q Consensus 40 ~~~va~V~g~~I~~~~f~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~qvl~~li~~~ll~~~a~~~gi~vsd~~v~~~i 119 (631)
T Consensus 25 ~~~vat~kgg~IT~~e~y~~lk~~---------------------~g~~~l~~li~~kvl~~~y-----kVsdkev~~~~ 78 (283)
T PRK02998 25 SDNVVTSKVGNITEKELSKELRQK---------------------YGESTLYQMVLSKALLDKY-----KVSDEEAKKQV 78 (283)
T ss_pred CCCEEEECCCCCCHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHC-----CCCHHHHHHHH
T ss_conf 981798439928399999999999---------------------9999999999999999983-----68899999999
Q ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 6347655421023989999999861100-567767888775444555430145422002223345543211123332100
Q gi|254781158|r 120 ARSPLFHGKDNKFSHDVFVSRLAREGIN-EKEYIDHYTKMLSRTDVVGMFVGGMRPSNLLLDQAKRFYFENRSVDYIVLN 198 (631)
Q Consensus 120 ~~~p~Fq~~~G~Fd~~~~~~~L~~~g~t-~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~i~~~~~~ 198 (631)
T Consensus 79 ~~~k---~qyG----~~F~~~L~q~g~t~e~~~k~~i~~~l~~~~a~--------------------------------- 118 (283)
T PRK02998 79 EEAK---DKMG----DNFKSTLEQVGLKNEDELKEKMKPEIAFEKAI--------------------------------- 118 (283)
T ss_pred HHHH---HHHH----HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH---------------------------------
T ss_conf 9999---9997----89999999869982899999999999999987---------------------------------
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00123456789889999976566655545443322221100000001257889998755554555433211237887530
Q gi|254781158|r 199 NRHVPAIADPSNAVLTQWFEKYKDNYRAPEYKRISYILFDVHEKEKKIEISNDELQAEYEKNKEKYFSPEIRTVEQLVFP 278 (631)
Q Consensus 199 ~~~~~~~~~~td~el~~yy~~nk~~f~~pe~~~i~yv~~~~~~~~~~~~vt~~ei~~~Y~~~~~~f~~pe~~~~~~i~~~ 278 (631)
T Consensus 119 ----------------------------------------------k~~vtd~~~k~~y~--------p-~~~~~hIlv~ 143 (283)
T PRK02998 119 ----------------------------------------------KATVTEKDVKDNYK--------P-EMKVSHILVK 143 (283)
T ss_pred ----------------------------------------------HCCCCHHHHHHHCC--------C-CEEEEEEEEC
T ss_conf ----------------------------------------------55188899998649--------8-6488998989
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHCCC----CCCCCCCCCHHHCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHC
Q ss_conf 00014788875303651478877520112----36524531623226756777642023667225678617721121102
Q gi|254781158|r 279 NQKEADEAFQSLKKGKKFIQLAEEQGKSL----SDISLGSFSKEYIPDVSLADSIFSLAKKGDFTPVIHGSFGYVIAHVS 354 (631)
Q Consensus 279 ~~~~A~~~~~~l~~g~~F~~la~~~~~~~----~~~~lg~~~~~~~~~~~~~~a~f~l~~~G~is~pv~t~~G~~iikv~ 354 (631)
T Consensus 144 ~e~~A~~v~~~L~~G~dF~~lAk~yS~D~~s~~~GG~Lg~~~~g~~~-~~f~~Aaf~L-~~G~vS~PVkt~~GyHIIkv~ 221 (283)
T PRK02998 144 DEKTAKEVKEKVNNGEDFAALAKQYSEDTGSKEQGGEISGFAPGQTV-KEFEEAAYKL-DAGQVSEPVKTTYGYHIIKVT 221 (283)
T ss_pred CHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHCC-CCCCCCCCEEECCEEEEEEEE
T ss_conf 89999999999877998999999958996644358866767999807-8999999759-999948877878867999980
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3330134455432233334567999988888
Q gi|254781158|r 355 NIKPSFTVSFQEVKKDIANQMRITKASEKVK 385 (631)
Q Consensus 355 ~~~~~~~~~~~evk~~I~~~l~~~~a~~~~~ 385 (631)
T Consensus 222 dk~~--~~~~~~~K~~l~~~i~~~k~~d~~~ 250 (283)
T PRK02998 222 DKKE--LKPFDEVKDSIRKDLEQQRLQDTTG 250 (283)
T ss_pred CCCC--CCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 1688--9999999999999999999755478