HHsearch alignment for GI: 254781158 and conserved domain: PRK03095
>PRK03095 prsA peptidylprolyl isomerase; Reviewed.
Probab=100.00 E-value=2e-33 Score=236.27 Aligned_cols=231 Identities=21% Similarity=0.313 Sum_probs=182.9
Q ss_pred CCCCCEEEEECCEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
Q ss_conf 78884289999878489999999999999999870889997899860138999999999999999999849824889999
Q gi|254781158|r 37 VSGSSTVVSVGRQKVPFSSFINSWKQELGMISQKIGFVVNSERARSVGLDKKILDNLVSGATLDQFIEDIGLEADHGRVW 116 (631)
Q Consensus 37 ~~~~~~va~V~g~~I~~~~f~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~qvl~~li~~~ll~~~a~~~gi~vsd~~v~ 116 (631)
T Consensus 21 ~~~~~~vat~kgg~IT~~e~y~~~k~---~------------------~g~~~l~~mi~~kvl~~~y-----kVsdkeV~ 74 (287)
T PRK03095 21 TSSSDKIVTSKAGDITKDEFYEQMKT---Q------------------AGKQVLNNMVMEKVLIKNY-----KVEDKEVD 74 (287)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHH---H------------------HHHHHHHHHHHHHHHHHHC-----CCCHHHHH
T ss_conf 89987589846982729999999998---8------------------8999999999999999964-----87899999
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99963476554210239899999998611005677678887754445554301454220022233455432111233321
Q gi|254781158|r 117 GEIARSPLFHGKDNKFSHDVFVSRLAREGINEKEYIDHYTKMLSRTDVVGMFVGGMRPSNLLLDQAKRFYFENRSVDYIV 196 (631)
Q Consensus 117 ~~i~~~p~Fq~~~G~Fd~~~~~~~L~~~g~t~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~r~i~~~~ 196 (631)
T Consensus 75 ~~~~~~---k~qyG----~~F~~~L~q~glt~e~~K~~ir~~l~~~~a~~------------------------------ 117 (287)
T PRK03095 75 KKYDEM---KKQYG----DQFDTLLKQQGIKEETLKTGVRAQLAQEKAIE------------------------------ 117 (287)
T ss_pred HHHHHH---HHHHH----HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH------------------------------
T ss_conf 999999---99987----99999999879998999999999999999986------------------------------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00001234567898899999765666555454433222211000000012578899987555545554332112378875
Q gi|254781158|r 197 LNNRHVPAIADPSNAVLTQWFEKYKDNYRAPEYKRISYILFDVHEKEKKIEISNDELQAEYEKNKEKYFSPEIRTVEQLV 276 (631)
Q Consensus 197 ~~~~~~~~~~~~td~el~~yy~~nk~~f~~pe~~~i~yv~~~~~~~~~~~~vt~~ei~~~Y~~~~~~f~~pe~~~~~~i~ 276 (631)
T Consensus 118 ---------~~itd~e~k~~----------------------------------------y~---------p~v~~~hIl 139 (287)
T PRK03095 118 ---------KTITDKELKEN----------------------------------------YK---------PEIKASHIL 139 (287)
T ss_pred ---------CCCCHHHHHHH----------------------------------------CC---------CCEEEEEEE
T ss_conf ---------42889999986----------------------------------------49---------864899988
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC----CCCCCCCCCHHHCCCHHHHHHHHCCCCCCCEEEEEEECCCCHHHH
Q ss_conf 3000014788875303651478877520112----365245316232267567776420236672256786177211211
Q gi|254781158|r 277 FPNQKEADEAFQSLKKGKKFIQLAEEQGKSL----SDISLGSFSKEYIPDVSLADSIFSLAKKGDFTPVIHGSFGYVIAH 352 (631)
Q Consensus 277 ~~~~~~A~~~~~~l~~g~~F~~la~~~~~~~----~~~~lg~~~~~~~~~~~~~~a~f~l~~~G~is~pv~t~~G~~iik 352 (631)
T Consensus 140 v~~e~~Ak~i~~~l~~G~dF~~lAk~~S~D~~s~~~GG~lg~~~~~~~~-~~f~~aaf~L-k~geiS~Pvkt~~GyhIIk 217 (287)
T PRK03095 140 VKDEATAKKVKEELGQGKSFEELAKQYSEDTGSKEKGGDLGFFGPGKMV-KEFEDAAYKL-KKDEVSEPVKSQFGYHIIK 217 (287)
T ss_pred ECCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCCCH-HHHHHHHHCC-CCCCCCCCEEECCEEEEEE
T ss_conf 8999999999999987998999999967996502039715657987625-9999999728-9998588676088359999
Q ss_pred HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH
Q ss_conf 0233301344554322333345679999888--88655657
Q gi|254781158|r 353 VSNIKPSFTVSFQEVKKDIANQMRITKASEK--VKEDYKRL 391 (631)
Q Consensus 353 v~~~~~~~~~~~~evk~~I~~~l~~~~a~~~--~~~~~~~i 391 (631)
T Consensus 218 ~~~k~~k-~~~~~~~K~~lk~~i~~~k~~D~~~~~~vi~k~ 257 (287)
T PRK03095 218 VTDIKEP-EKSFEQSKADIKKELVQKKAQDGEFMNDLMMKE 257 (287)
T ss_pred EEECCCC-CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_conf 8414788-999899999999999999864769999999999