HHsearch alignment for GI: 254781158 and conserved domain: PRK10770
>PRK10770 peptidyl-prolyl cis-trans isomerase SurA; Provisional.
Probab=99.83 E-value=6.1e-18 Score=135.02 Aligned_cols=123 Identities=16% Similarity=0.218 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHH---------HHHHHHHHHHHHCCC-CHHHHHHHHHCC----CCCCCCCCCCHHHCCCHHHHHHHHCCC
Q ss_conf 112378875300---------001478887530365-147887752011----236524531623226756777642023
Q gi|254781158|r 268 EIRTVEQLVFPN---------QKEADEAFQSLKKGK-KFIQLAEEQGKS----LSDISLGSFSKEYIPDVSLADSIFSLA 333 (631)
Q Consensus 268 e~~~~~~i~~~~---------~~~A~~~~~~l~~g~-~F~~la~~~~~~----~~~~~lg~~~~~~~~~~~~~~a~f~l~ 333 (631)
T Consensus 283 ~e~~~rHILi~~~~~~~~~~a~~~l~~i~~~i~~g~~~F~~~A~~~S~D~~Sa~~GGdLgw~~~~~~~-p~f~~~~~~l- 360 (428)
T PRK10770 283 TEVHARHILLKPSPIMTDEQARAKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFD-PAFRDALTRL- 360 (428)
T ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHCCCCCCCCCCCCCC-HHHHHHHHCC-
T ss_conf 55766676337886657599999999999998767557999999862795245428836777845479-7899999708-
Q ss_pred CCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 667225678617721121102333013445543223333456799998888865565776
Q gi|254781158|r 334 KKGDFTPVIHGSFGYVIAHVSNIKPSFTVSFQEVKKDIANQMRITKASEKVKEDYKRLEE 393 (631)
Q Consensus 334 ~~G~is~pv~t~~G~~iikv~~~~~~~~~~~~evk~~I~~~l~~~~a~~~~~~~~~~i~d 393 (631)
T Consensus 361 ~~GeiS~Pv~t~~G~hii~l~~~R~~d~-~~~~~r~~~~~~l~~~k~~~~~~~wl~~lR~ 419 (428)
T PRK10770 361 NKGQISAPVHSSFGWHLIELLDTRQVDK-TDAAQKDRAYRMLFNRKFSEEAATWMQEQRA 419 (428)
T ss_pred CCCCCCCCEECCCEEEEEEEEEECCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999165666587069999984036786-4255899999999999999999999999985