HHsearch alignment for GI: 254781158 and conserved domain: TIGR02925
>TIGR02925 cis_trans_EpsD peptidyl-prolyl cis-trans isomerase, EpsD family; InterPro: IPR014274 Proteins in this entry include EpsD from Methylobacillus sp. 12S and belong to the peptidyl-prolyl cis-trans isomerase family. They are located at loci associated with exopolysaccharide biosynthesis and are encoded near a homologue of EpsH (IPR013426 from INTERPRO)..
Probab=99.63 E-value=1e-13 Score=107.44 Aligned_cols=223 Identities=16% Similarity=0.234 Sum_probs=147.4
Q ss_pred HHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEECCEECCHHHHHHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999998313101036788842899998784899999999999999998708899-978998601389999999
Q gi|254781158|r 15 KIFLVVLFVPFLIWGLSDALFSVSGSSTVVSVGRQKVPFSSFINSWKQELGMISQKIGFVV-NSERARSVGLDKKILDNL 93 (631)
Q Consensus 15 ~ii~~l~~~~f~~~g~~~~~~~~~~~~~va~V~g~~I~~~~f~~~~~~~~~~~~~~~g~~~-~~~~~~~~~l~~qvl~~l 93 (631)
T Consensus 3 ~~~~~ll~~~La--~C~~~~~~~~asQVAA~VNG~EIsv~QlNy~l~r~p-------~~~~~~PEda--~~~r~~~Ld~L 71 (236)
T TIGR02925 3 SVLLVLLVGALA--ACGEKEAKESASQVAAKVNGKEISVHQLNYALQRIP-------NLGADSPEDA--ARARRQVLDRL 71 (236)
T ss_pred HHHHHHHHHHHH--CCCCHHCCCCCCCEEEEECCEECCHHHHHHHHHHCC-------CCCCCCCHHH--HHHHHHHHHHH
T ss_conf 578769998751--244001027888538888682111889999997144-------6788870215--89999999999
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999999999849824889999999634765542102398999999986110056776788877544455543014542
Q gi|254781158|r 94 VSGATLDQFIEDIGLEADHGRVWGEIARSPLFHGKDNKFSHDVFVSRLAREGINEKEYIDHYTKMLSRTDVVGMFVGGMR 173 (631)
Q Consensus 94 i~~~ll~~~a~~~gi~vsd~~v~~~i~~~p~Fq~~~G~Fd~~~~~~~L~~~g~t~~~~~~~~~~~l~~~~l~~~~~~~~~ 173 (631)
T Consensus 72 Vdqel~~~kA~E~KLDRsP-~V~~A~~~A---------------------------------~r~IlArAYl~~~----- 112 (236)
T TIGR02925 72 VDQELVVEKALEEKLDRSP-DVVMALEAA---------------------------------KREILARAYLEQL----- 112 (236)
T ss_pred HHHHHHHHHHHHHCCCCCH-HHHHHHHHH---------------------------------HHHHHHHHHHHHH-----
T ss_conf 9999999998860046785-789999998---------------------------------8989999999987-----
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf 20022233455432111233321000012345678988999997656665554544332222110000000125788999
Q gi|254781158|r 174 PSNLLLDQAKRFYFENRSVDYIVLNNRHVPAIADPSNAVLTQWFEKYKDNYRAPEYKRISYILFDVHEKEKKIEISNDEL 253 (631)
Q Consensus 174 ~~~~~~~~~~~~~~~~r~i~~~~~~~~~~~~~~~~td~el~~yy~~nk~~f~~pe~~~i~yv~~~~~~~~~~~~vt~~ei 253 (631)
T Consensus 113 ----------------------------~g~~~~Ps~~e~~~Y~~~HP~LFA~RK~Y~---------------------- 142 (236)
T TIGR02925 113 ----------------------------VGAQSKPSPEEIKEYFQEHPELFAERKLYN---------------------- 142 (236)
T ss_pred ----------------------------HCCCCCCCHHHHHHHHHHHHHHHHHCCCCC----------------------
T ss_conf ----------------------------447988788889888610056676066311----------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHCCCCHHHHHHHHH-CCCC-CCCCCCCCHHHCCCHHHHHHH
Q ss_conf 8755554555433211237887530--00014788875303651478877520-1123-652453162322675677764
Q gi|254781158|r 254 QAEYEKNKEKYFSPEIRTVEQLVFP--NQKEADEAFQSLKKGKKFIQLAEEQG-KSLS-DISLGSFSKEYIPDVSLADSI 329 (631)
Q Consensus 254 ~~~Y~~~~~~f~~pe~~~~~~i~~~--~~~~A~~~~~~l~~g~~F~~la~~~~-~~~~-~~~lg~~~~~~~~~~~~~~a~ 329 (631)
T Consensus 143 ------------------lqEi~~pG~~~~~~d~Lr~~~~~~k~L~d~~~WLKa~~~~f~~~~~~r~AEQ~P-~~~L~~l 203 (236)
T TIGR02925 143 ------------------LQEIALPGPDKELLDELRAMVENSKPLEDILAWLKAKNVKFKASSAARSAEQLP-AEILAKL 203 (236)
T ss_pred ------------------HHEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCHHCCC-HHHHHHH
T ss_conf ------------------111441597820358999997538887789999704898302353236601146-5665784
Q ss_pred HCCCCCCCEEEEEEECCCC-HHHHHCCCCC
Q ss_conf 2023667225678617721-1211023330
Q gi|254781158|r 330 FSLAKKGDFTPVIHGSFGY-VIAHVSNIKP 358 (631)
Q Consensus 330 f~l~~~G~is~pv~t~~G~-~iikv~~~~~ 358 (631)
T Consensus 204 ~~l-k~G~~-l~~~~p~~~s~~~~~~~aq~ 231 (236)
T TIGR02925 204 AKL-KDGAV-LVVQGPNNVSLILRVADAQA 231 (236)
T ss_pred HCC-CCCCE-EEEECCCCEEEEEEEECCCC
T ss_conf 428-97824-88877887379877400002