HHsearch alignment of GI: 254781158 and MMDB domain: 1m5y_A_149-258

>1m5y_A (A:149-258) SurviVal protein, surviVal protein SURA; surviVal protein A, periplasmic molecular chaperone, membrane protein folding, GRAM negative bacteria; 3.00A {Escherichia coli}
Probab=97.21  E-value=0.002  Score=39.78  Aligned_cols=82  Identities=15%  Similarity=0.095  Sum_probs=55.1

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECC
Q ss_conf             99999999999983699978989863981440256222655423579899999861688872034516995699999705
Q gi|254781158|r  499 VSSKANQLVLEYSKEGKNFRDIGKNLGASLLTTNQINRMDNENKFFGYDGISQVFSGPVEMVKCFPIENGLSYVVFKVTN  578 (631)
Q Consensus       499 ~~~~a~~~~~~~~~~g~~l~~~a~~~~~~~~~~~~i~r~~~~~~~~~~~~~~~iF~~~~g~~~~~~~~~~~~~~v~~v~~  578 (631)
                      .+..|.++..++ ++|.+|+++++.++..-.....-.........+++++...+|+++.|+++ .|...+.+|.|++|.+
T Consensus        27 ~~~~A~~i~~~l-~~g~~F~~la~~ys~d~~~~~~g~~g~~~~~~l~~~~~~~~~~L~~GevS-~pi~~~~g~~Iikl~~  104 (110)
T 1m5y_A           27 AESQARAIVDQA-RNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIV-GPIRSGVGFHILKVND  104 (110)
T ss_dssp             HHHHHHHHHHHH-HTTCCHHHHHHHHCCSTTGGGTTEEEEECGGGSCHHHHTGGGTCCTTCEE-EEEEETTEEEEEEEEE
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHCHHHHHHHHHHCCCCCC-CCCCCCCHHHHHHHHH
T ss_conf             988888899987-40126899988703472655167421000443010567777762357645-6201553589999998


Q ss_pred             CCCC
Q ss_conf             8788
Q gi|254781158|r  579 SKVG  582 (631)
Q Consensus       579 ~~~~  582 (631)
                      ..++
T Consensus       105 ~~~~  108 (110)
T 1m5y_A          105 LRGE  108 (110)
T ss_dssp             ECCC
T ss_pred             HHHH
T ss_conf             7601