HHsearch alignment of GI: 254781158 and MMDB domain: 3gpk_A_

>3gpk_A (A:) PPIC-type peptidyl-prolyl CIS-trans isomerase; rotamase,ppiase domain, NYSGXRC,11189O3,PSI2., structural genomics; 1.55A {Novosphingobium aromaticivorans DSM12444}
Probab=99.60  E-value=3.2e-16  Score=123.33  Aligned_cols=96  Identities=17%  Similarity=0.243  Sum_probs=84.9

Q ss_pred             HHHHHHHHHHHHHH--------HHHHHHHHHHHHHCCCCHHHHHHHHHCC---CCCCCCCCCCHHHCCCHHHHHHHHCCC
Q ss_conf             33211237887530--------0001478887530365147887752011---236524531623226756777642023
Q gi|254781158|r  265 FSPEIRTVEQLVFP--------NQKEADEAFQSLKKGKKFIQLAEEQGKS---LSDISLGSFSKEYIPDVSLADSIFSLA  333 (631)
Q Consensus       265 ~~pe~~~~~~i~~~--------~~~~A~~~~~~l~~g~~F~~la~~~~~~---~~~~~lg~~~~~~~~~~~~~~a~f~l~  333 (631)
                      ..|+++.++||+++        .++.|++++.+|++|++|+++|+++|.+   ..+|++||+..+.|+ ++|.+++|+| 
T Consensus         3 ~~p~~v~~~~I~i~~~~~~~~~~~~~a~~i~~~l~~g~~F~~lA~~yS~~~~~~~~g~~g~~~~~~l~-~~~~~~~~~l-   80 (112)
T 3gpk_A            3 LGTEEYRIGEIFLAATEENKPQVFANAEKIVEQLKQGGSFVAYARQYSEASTAAVGGDLGWIRLAQLP-TELATTAASX-   80 (112)
T ss_dssp             --CCEEEEEEEEEECCGGGHHHHHHHHHHHHHHHHTTCCHHHHHHHHCCSTTGGGTTEEEEECGGGSC-HHHHHHHHHC-
T ss_pred             CCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHC-
T ss_conf             88637879999981894257999999999999998699989999985635332333210000344104-6999999818-


Q ss_pred             CCCCEEEEEEECCCCHHHHHCCCCCHHHH
Q ss_conf             66722567861772112110233301344
Q gi|254781158|r  334 KKGDFTPVIHGSFGYVIAHVSNIKPSFTV  362 (631)
Q Consensus       334 ~~G~is~pv~t~~G~~iikv~~~~~~~~~  362 (631)
                      ++|+||+||++++||||+||.+++++.++
T Consensus        81 ~~Gevs~pi~~~~G~~Iikv~~~~~~~~~  109 (112)
T 3gpk_A           81 GPGQLAGPVEIRGGFSILYLIDKREGHHH  109 (112)
T ss_dssp             CTTCEEEEEEETTEEEEEEEEEEECCSCG
T ss_pred             CCCCCCCCEEECCEEEEEEEEEEECCCCC
T ss_conf             99981865898999999999648767367