HHsearch alignment of GI: 254781158 and MMDB domain: 3gpk_A_
>3gpk_A (A:) PPIC-type peptidyl-prolyl CIS-trans isomerase; rotamase,ppiase domain, NYSGXRC,11189O3,PSI2., structural genomics; 1.55A {Novosphingobium aromaticivorans DSM12444}
Probab=99.60 E-value=3.2e-16 Score=123.33 Aligned_cols=96 Identities=17% Similarity=0.243 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHH--------HHHHHHHHHHHHHCCCCHHHHHHHHHCC---CCCCCCCCCCHHHCCCHHHHHHHHCCC
Q ss_conf 33211237887530--------0001478887530365147887752011---236524531623226756777642023
Q gi|254781158|r 265 FSPEIRTVEQLVFP--------NQKEADEAFQSLKKGKKFIQLAEEQGKS---LSDISLGSFSKEYIPDVSLADSIFSLA 333 (631)
Q Consensus 265 ~~pe~~~~~~i~~~--------~~~~A~~~~~~l~~g~~F~~la~~~~~~---~~~~~lg~~~~~~~~~~~~~~a~f~l~ 333 (631)
..|+++.++||+++ .++.|++++.+|++|++|+++|+++|.+ ..+|++||+..+.|+ ++|.+++|+|
T Consensus 3 ~~p~~v~~~~I~i~~~~~~~~~~~~~a~~i~~~l~~g~~F~~lA~~yS~~~~~~~~g~~g~~~~~~l~-~~~~~~~~~l- 80 (112)
T 3gpk_A 3 LGTEEYRIGEIFLAATEENKPQVFANAEKIVEQLKQGGSFVAYARQYSEASTAAVGGDLGWIRLAQLP-TELATTAASX- 80 (112)
T ss_dssp --CCEEEEEEEEEECCGGGHHHHHHHHHHHHHHHHTTCCHHHHHHHHCCSTTGGGTTEEEEECGGGSC-HHHHHHHHHC-
T ss_pred CCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHH-HHHHHHHHHC-
T ss_conf 88637879999981894257999999999999998699989999985635332333210000344104-6999999818-
Q ss_pred CCCCEEEEEEECCCCHHHHHCCCCCHHHH
Q ss_conf 66722567861772112110233301344
Q gi|254781158|r 334 KKGDFTPVIHGSFGYVIAHVSNIKPSFTV 362 (631)
Q Consensus 334 ~~G~is~pv~t~~G~~iikv~~~~~~~~~ 362 (631)
++|+||+||++++||||+||.+++++.++
T Consensus 81 ~~Gevs~pi~~~~G~~Iikv~~~~~~~~~ 109 (112)
T 3gpk_A 81 GPGQLAGPVEIRGGFSILYLIDKREGHHH 109 (112)
T ss_dssp CTTCEEEEEEETTEEEEEEEEEEECCSCG
T ss_pred CCCCCCCCEEECCEEEEEEEEEEECCCCC
T ss_conf 99981865898999999999648767367