HHsearch results for GI: 254781158 and protein with PDBid: 3gpk_A
>3gpk_A PPIC-type peptidyl-prolyl CIS-trans isomerase; rotamase,ppiase domain, NYSGXRC,11189O3,PSI2., structural genomics; 1.55A {Novosphingobium aromaticivorans DSM12444}
Probab=99.52 E-value=2.9e-15 Score=116.11 Aligned_cols=92 Identities=17% Similarity=0.262 Sum_probs=77.3
Q ss_pred HHHHHHHHHHH--------HHHHHHHHHHHHHCCCCHHHHHHHHHCC---CCCCCCCCCCHHHCCCHHHHHHHHCCCCCC
Q ss_conf 11237887530--------0001478887530365147887752011---236524531623226756777642023667
Q gi|254781158|r 268 EIRTVEQLVFP--------NQKEADEAFQSLKKGKKFIQLAEEQGKS---LSDISLGSFSKEYIPDVSLADSIFSLAKKG 336 (631)
Q Consensus 268 e~~~~~~i~~~--------~~~~A~~~~~~l~~g~~F~~la~~~~~~---~~~~~lg~~~~~~~~~~~~~~a~f~l~~~G 336 (631)
++.+++||+++ ..+.|++++.+|++|.+|+++|+++|.+ ..+|++||+..+.|| ++|.+++++| ++|
T Consensus 6 ~e~~l~hI~i~~~~~~~~~~~~~a~~i~~~l~~g~~F~~la~~~S~~~~~~~gG~lGw~~~~~l~-~~f~~~~~~l-k~G 83 (112)
T 3gpk_A 6 EEYRIGEIFLAATEENKPQVFANAEKIVEQLKQGGSFVAYARQYSEASTAAVGGDLGWIRLAQLP-TELATTAASM-GPG 83 (112)
T ss_dssp CEEEEEEEEEECCGGGHHHHHHHHHHHHHHHHTTCCHHHHHHHHCCSTTGGGTTEEEEECGGGSC-HHHHHHHHHC-CTT
T ss_pred CEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCCCCCCCHHHCC-HHHHHHHHCC-CCC
T ss_conf 47889999982894357999999999999988799999999996800132218867743531269-8999999838-989
Q ss_pred CEEEEEEECCCCHHHHHCCCCCHHH
Q ss_conf 2256786177211211023330134
Q gi|254781158|r 337 DFTPVIHGSFGYVIAHVSNIKPSFT 361 (631)
Q Consensus 337 ~is~pv~t~~G~~iikv~~~~~~~~ 361 (631)
++|+||+++.||||+||.+++++..
T Consensus 84 evs~pI~t~~G~hIikl~dkr~G~~ 108 (112)
T 3gpk_A 84 QLAGPVEIRGGFSILYLIDKREGHH 108 (112)
T ss_dssp CEEEEEEETTEEEEEEEEEEECCSC
T ss_pred CCCCCEEECCEEEEEEEEEEECCCC
T ss_conf 8375479899999999965877746