HHsearch alignment for GI: 254781160 and conserved domain: pfam04013
>pfam04013 DUF358 Protein of unknown function (DUF358). The proteins in this family are around 200 amino acids long with the exception of the Archaeoglobus fulgidus protein AF_1056 that has an additional 100 amino acids at its amino terminus. The function of these bacterial protein is unknown, however, they do contain several conserved histidines and aspartates that might form a metal binding site.
Probab=92.97 E-value=0.21 Score=29.83 Aligned_cols=79 Identities=18% Similarity=0.259 Sum_probs=53.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHCCC-CCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHH
Q ss_conf 000011233322333212630001211022210036-7883599988888888899999995799558636887400448
Q gi|254781160|r 150 TTLEFLLKNWDHNCQIVFADETCGSENSLEKLHAIA-HIPNVAILIGPEGGYHSEEKETLHSLPFVTPLSLGPRILRSDT 228 (245)
Q Consensus 150 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~IGPEGGfs~~E~~~l~~~~~~~~vsLG~~ILR~ET 228 (245)
T Consensus 113 ~~fe~ll~e~~e~~~~~~Ld~~G~~i~------~~~~~~~~~~FiL~Dh~~~~~~e~~~L~~~~~-~~iSLGp~~L~a~h 185 (199)
T pfam04013 113 MGFEALIRELSEFKPLYYLHEDGGDIS------NVKIPPNNPVFILGDHIGLPEEDEKFLERILA-LKVSLGPLSLHASH 185 (199)
T ss_pred CCHHHHHHHHHCCCCEEEECCCCCCCC------CCCCCCCCCEEEECCCCCCCHHHHHHHHHCCC-CEEEECCHHHHHHH
T ss_conf 899999999855897999978898432------35577889769855999988678888864488-21553738888757
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254781160|r 229 AAVAAMA 235 (245)
Q Consensus 229 A~i~als 235 (245)
T Consensus 186 cI~ivH~ 192 (199)
T pfam04013 186 CITLVHN 192 (199)
T ss_pred HHHHHHH
T ss_conf 9999999