HHsearch alignment of GI: 254781160 and MMDB domain: 1v2x_A_21-176

>1v2x_A (A:21-176) TRNA (GM18) methyltransferase; DEEP trefoil knot, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: SAM; 1.50A {Thermus thermophilus}
Probab=90.98  E-value=0.28  Score=28.55  Aligned_cols=138  Identities=13%  Similarity=0.102  Sum_probs=72.5

Q ss_pred             CCCEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             431354134-4541156777544445665655554202201122122335788999975123443433200000011233
Q gi|254781160|r   80 SDVQYIFSP-IKTNRLDYMIQKSVEMGMGAIRPVITRYTQNTHYNMDRVRTYTISAAEQCDILTLPFIYPPTTLEFLLKN  158 (245)
Q Consensus        80 ~~i~l~~~~-~k~~~~~~ilqk~tELGV~~I~p~~~~rs~~~~~k~eR~~~ii~eA~eQsgr~~lP~i~~~~~l~~~l~~  158 (245)
                      |++.+++.- -.+..+-.+++-+--+|++.++.....-.....++.-            +|......+....++++++..
T Consensus         1 p~l~ivl~~~~~~~NiG~i~Rta~a~G~~~i~i~~~~~~~~~~~~~s------------~g~~~~~~~~~~~~~~~~~~~   68 (156)
T 1v2x_A            1 PDLTVLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTGGVPTFNETS------------GGSHKWVYLRVHPDLHEAFRF   68 (156)
T ss_dssp             TTEEEEEESCCCHHHHHHHHHHHHHHTBSEEEEESGGGGSCCCCSSC------------SSGGGTSEEEEESSHHHHHHH
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEC------------CCCEEEEECCCCCCCHHHHHH
T ss_conf             99799996798866399999999981986120234423430000100------------122144301124542236899


Q ss_pred             CCCCCCCCCCCCHHCCCCCHHHHHCCCCCCCEEEEECCC-CCCCHHHHHHHHHCCCCEEEECCCC--CCCHHHHHHHHHH
Q ss_conf             322333212630001211022210036788359998888-8888899999995799558636887--4004489999999
Q gi|254781160|r  159 WDHNCQIVFADETCGSENSLEKLHAIAHIPNVAILIGPE-GGYHSEEKETLHSLPFVTPLSLGPR--ILRSDTAAVAAMA  235 (245)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~IGPE-GGfs~~E~~~l~~~~~~~~vsLG~~--ILR~ETA~i~als  235 (245)
                      .......+++-+...   ....+......+++.+++|.| .|.|+++++.....=   .+-+.+.  -|=.-+|+-.++-
T Consensus        69 ~~~~~~~~~~~~~~~---~~~~l~~~~~~~~~~lv~G~E~~Gls~e~l~~~d~~v---~IP~~g~~~SLNvs~A~~I~ly  142 (156)
T 1v2x_A           69 LKERGFTVYATALRE---DARDFREVDYTKPTAVLFGAEKWGVSEEALALADGAI---KIPMLGMVQSLNVSVAAAVILF  142 (156)
T ss_dssp             HHHTTCEEEEECCCT---TSEEGGGSCTTSSEEEEECBTTTBSCHHHHHHSSEEE---ECCCCSSCSCCCHHHHHHHHHH
T ss_pred             HHHCCCCCCCCCCCC---CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCEE---EECCCCCCCCCCHHHHHHHHHH
T ss_conf             986588531122222---3322101257888089966766646689997249289---9589998663329999999999