HHsearch results for GI: 254781160 and protein with PDBid: 1v2x_A
>1v2x_A TRNA (GM18) methyltransferase; DEEP trefoil knot, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: SAM; 1.50A {Thermus thermophilus} SCOP: c.116.1.1
Probab=92.91 E-value=0.076 Score=31.27 Aligned_cols=117 Identities=14% Similarity=0.122 Sum_probs=60.4
Q ss_pred CCCCCEE-EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 5443135-413445411567775444456656555542022011221223357889999751234434332000000112
Q gi|254781160|r 78 KQSDVQY-IFSPIKTNRLDYMIQKSVEMGMGAIRPVITRYTQNTHYNMDRVRTYTISAAEQCDILTLPFIYPPTTLEFLL 156 (245)
Q Consensus 78 ~~~~i~l-~~~~~k~~~~~~ilqk~tELGV~~I~p~~~~rs~~~~~k~eR~~~ii~eA~eQsgr~~lP~i~~~~~l~~~l 156 (245)
+.+.+.+ +-.+-.+..+-.|++-|.-.|+..++.+....+... +++. ..+......+....++.+++
T Consensus 19 ~~~~~~vvld~v~~p~NlGaIiRta~afG~~~i~~v~~~~~~~~------~~~~------~~~~~~~~~~~~~~~~~~~l 86 (194)
T 1v2x_A 19 RQPDLTVLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTGGVPT------FNET------SGGSHKWVYLRVHPDLHEAF 86 (194)
T ss_dssp CBTTEEEEEESCCCHHHHHHHHHHHHHHTBSEEEEESGGGGSCC------CCSS------CSSGGGTSEEEEESSHHHHH
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCH------HHHH------CCCCCCEEEEEEECCHHHHH
T ss_conf 89998999967988465999999999749964303588667713------4431------03443124699955899999
Q ss_pred CCCCCCCCCCCCCCHHCCCCCHHHHHCCCCCCCEEEEECCCC-CCCHHHHHHHH
Q ss_conf 333223332126300012110222100367883599988888-88889999999
Q gi|254781160|r 157 KNWDHNCQIVFADETCGSENSLEKLHAIAHIPNVAILIGPEG-GYHSEEKETLH 209 (245)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~IGPEG-Gfs~~E~~~l~ 209 (245)
+........+...+.... ...+......+++.+++|+|+ |.|++..+...
T Consensus 87 ~~lk~~~~~i~~~~~~~~---~~~~~~~~~~~~~~lVfG~E~~Gls~e~l~~~d 137 (194)
T 1v2x_A 87 RFLKERGFTVYATALRED---ARDFREVDYTKPTAVLFGAEKWGVSEEALALAD 137 (194)
T ss_dssp HHHHHTTCEEEEECCCTT---SEEGGGSCTTSSEEEEECBTTTBSCHHHHHHSS
T ss_pred HHHHHCCCEEEECCCCCC---CCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCC
T ss_conf 999975982542012222---454011026888289976767889999998589