HHsearch results for GI: 254781160 and protein with PDBid: 1v2x_A

>1v2x_A TRNA (GM18) methyltransferase; DEEP trefoil knot, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: SAM; 1.50A {Thermus thermophilus} SCOP: c.116.1.1
Probab=92.91  E-value=0.076  Score=31.27  Aligned_cols=117  Identities=14%  Similarity=0.122  Sum_probs=60.4

Q ss_pred             CCCCCEE-EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             5443135-413445411567775444456656555542022011221223357889999751234434332000000112
Q gi|254781160|r   78 KQSDVQY-IFSPIKTNRLDYMIQKSVEMGMGAIRPVITRYTQNTHYNMDRVRTYTISAAEQCDILTLPFIYPPTTLEFLL  156 (245)
Q Consensus        78 ~~~~i~l-~~~~~k~~~~~~ilqk~tELGV~~I~p~~~~rs~~~~~k~eR~~~ii~eA~eQsgr~~lP~i~~~~~l~~~l  156 (245)
                      +.+.+.+ +-.+-.+..+-.|++-|.-.|+..++.+....+...      +++.      ..+......+....++.+++
T Consensus        19 ~~~~~~vvld~v~~p~NlGaIiRta~afG~~~i~~v~~~~~~~~------~~~~------~~~~~~~~~~~~~~~~~~~l   86 (194)
T 1v2x_A           19 RQPDLTVLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTGGVPT------FNET------SGGSHKWVYLRVHPDLHEAF   86 (194)
T ss_dssp             CBTTEEEEEESCCCHHHHHHHHHHHHHHTBSEEEEESGGGGSCC------CCSS------CSSGGGTSEEEEESSHHHHH
T ss_pred             CCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCH------HHHH------CCCCCCEEEEEEECCHHHHH
T ss_conf             89998999967988465999999999749964303588667713------4431------03443124699955899999


Q ss_pred             CCCCCCCCCCCCCCHHCCCCCHHHHHCCCCCCCEEEEECCCC-CCCHHHHHHHH
Q ss_conf             333223332126300012110222100367883599988888-88889999999
Q gi|254781160|r  157 KNWDHNCQIVFADETCGSENSLEKLHAIAHIPNVAILIGPEG-GYHSEEKETLH  209 (245)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~IGPEG-Gfs~~E~~~l~  209 (245)
                      +........+...+....   ...+......+++.+++|+|+ |.|++..+...
T Consensus        87 ~~lk~~~~~i~~~~~~~~---~~~~~~~~~~~~~~lVfG~E~~Gls~e~l~~~d  137 (194)
T 1v2x_A           87 RFLKERGFTVYATALRED---ARDFREVDYTKPTAVLFGAEKWGVSEEALALAD  137 (194)
T ss_dssp             HHHHHTTCEEEEECCCTT---SEEGGGSCTTSSEEEEECBTTTBSCHHHHHHSS
T ss_pred             HHHHHCCCEEEECCCCCC---CCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCC
T ss_conf             999975982542012222---454011026888289976767889999998589