BLAST/PSIBLAST alignment of GI: 254781160 and GI: 148253212 at iteration 1
>gi|148253212|ref|YP_001237797.1| 16S ribosomal RNA methyltransferase RsmE [Bradyrhizobium sp. BTAi1] Length = 250
>gi|146405385|gb|ABQ33891.1| hypothetical protein BBta_1682 [Bradyrhizobium sp. BTAi1] Length = 250
 Score =  218 bits (555), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 105/236 (44%), Positives = 150/236 (63%)

Query: 9   RLFVDFPLCIKTQGKASGDQYHYLAHVLRMKEGDNILLFNGKDGEWLSKISYVGKSIRFK 68
           RL+VD PL      +   DQ +YL +VLR+  G  +L+FNG+DGEW   I    +     
Sbjct: 10  RLYVDAPLQHGAHVELDRDQSNYLGNVLRLGAGGRVLVFNGRDGEWQGLIGGRKRPDSLT 69

Query: 69  VEYQSRSQTKQSDVQYIFSPIKTNRLDYMIQKSVEMGMGAIRPVITRYTQNTHYNMDRVR 128
           +E+++R Q + +D+ Y+F+P+K  RLDYM+QK+VEMG+ ++ PVITR+TQ +  N +R+R
Sbjct: 70  IEHRTRPQDRLADLAYVFAPLKHARLDYMVQKAVEMGVSSLAPVITRHTQVSRVNGERMR 129

Query: 129 TYTISAAEQCDILTLPFIYPPTTLEFLLKNWDHNCQIVFADETCGSENSLEKLHAIAHIP 188
              I AAEQC IL+L  +  P +LE  L     +  +VF DE     + L+ L   +   
Sbjct: 130 ANVIEAAEQCGILSLAEVREPVSLERFLAQRPPDRLLVFCDEAADVADPLQALRGGSDYA 189

Query: 189 NVAILIGPEGGYHSEEKETLHSLPFVTPLSLGPRILRSDTAAVAAMALVQAICGDW 244
            + +LIGPEGG+ SEE+E L   P V  ++LGPRILR+DTA VAA+AL+QA  GDW
Sbjct: 190 GIDLLIGPEGGFASEERELLLRQPLVLRVALGPRILRADTAGVAALALIQATLGDW 245