Query gi|254781161|ref|YP_003065574.1| glutamate--cysteine ligase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 457
No_of_seqs 156 out of 980
Neff 8.6
Searched_HMMs 39220
Date Tue May 31 16:25:13 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781161.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01436 glu_cys_lig_pln glut 100.0 0 0 830.6 29.5 445 10-457 1-446 (446)
2 COG3572 GshA Gamma-glutamylcys 100.0 0 0 686.1 32.4 456 1-457 1-456 (456)
3 TIGR03444 gshA_related glutama 100.0 0 0 535.7 28.6 383 20-435 1-390 (390)
4 PRK13517 carboxylate-amine lig 100.0 0 0 431.3 31.6 353 26-456 4-364 (371)
5 PRK13515 carboxylate-amine lig 100.0 0 0 422.2 31.3 352 27-455 2-368 (381)
6 PRK13516 carboxylate-amine lig 100.0 0 0 412.5 30.8 352 26-456 7-366 (372)
7 pfam04107 GCS2 Glutamate-cyste 100.0 0 0 404.8 17.7 291 31-378 1-291 (291)
8 PRK13518 carboxylate-amine lig 100.0 0 0 386.9 28.1 327 30-443 12-346 (357)
9 TIGR02050 gshA_cyan_rel unchar 100.0 0 0 367.3 17.7 291 32-382 1-296 (297)
10 COG2170 Uncharacterized conser 100.0 0 0 329.5 23.6 350 30-455 2-359 (369)
11 TIGR02048 gshA_cyano glutamate 99.9 6.7E-21 1.7E-25 145.7 17.9 303 96-455 36-357 (377)
12 PRK02107 glutamate--cysteine l 99.5 2.5E-10 6.3E-15 81.5 23.2 389 10-443 1-456 (523)
13 PRK02471 bifunctional glutamat 99.3 7E-09 1.8E-13 72.7 22.0 360 15-456 10-418 (753)
14 COG2918 GshA Gamma-glutamylcys 99.2 1.5E-07 3.8E-12 64.5 23.7 374 3-443 1-458 (518)
15 pfam03074 GCS Glutamate-cystei 99.2 6.4E-10 1.6E-14 79.0 11.1 260 176-439 10-335 (365)
16 pfam04262 Glu_cys_ligase Gluta 98.7 8.8E-07 2.2E-11 59.9 14.5 155 32-219 20-204 (377)
17 KOG3754 consensus 98.5 4.3E-06 1.1E-10 55.7 13.1 211 13-241 26-312 (640)
18 TIGR03105 gln_synth_III glutam 98.2 3.5E-05 9.1E-10 50.1 11.6 163 16-230 104-293 (435)
19 COG0174 GlnA Glutamine synthet 98.2 6.1E-05 1.5E-09 48.7 11.4 103 16-138 113-231 (443)
20 pfam12224 Amidoligase_2 Putati 97.9 0.00038 9.8E-09 43.8 11.0 56 156-214 89-148 (250)
21 PRK09469 glnA glutamine synthe 97.3 0.011 2.7E-07 35.0 17.3 41 97-138 217-257 (469)
22 TIGR01434 glu_cys_ligase gluta 97.3 0.014 3.5E-07 34.4 20.9 366 33-450 21-463 (518)
23 pfam00120 Gln-synt_C Glutamine 97.1 0.011 2.8E-07 35.0 10.6 103 15-138 10-133 (257)
24 TIGR00653 GlnA glutamine synth 90.6 1.1 2.9E-05 22.7 7.3 31 14-46 114-145 (486)
25 KOG0683 consensus 87.5 0.19 4.9E-06 27.4 0.6 110 15-135 119-243 (380)
26 cd02166 NMNAT_Archaea This fam 60.8 11 0.00028 16.8 3.8 51 118-168 13-63 (163)
27 PRK12305 thrS threonyl-tRNA sy 58.3 9.8 0.00025 17.0 2.8 45 13-57 161-207 (576)
28 PRK03772 threonyl-tRNA synthet 58.1 7.8 0.0002 17.6 2.3 63 12-75 224-294 (642)
29 TIGR02699 archaeo_AfpA archaeo 56.9 3.9 0.0001 19.4 0.6 52 177-228 25-84 (176)
30 TIGR00418 thrS threonyl-tRNA s 54.6 6.1 0.00016 18.3 1.2 57 9-65 159-221 (595)
31 PRK12304 thrS threonyl-tRNA sy 50.8 9.9 0.00025 17.0 1.8 41 26-66 58-99 (604)
32 PRK12444 threonyl-tRNA synthet 50.1 14 0.00035 16.1 2.5 63 12-75 227-297 (639)
33 COG3968 Uncharacterized protei 50.0 10 0.00027 16.9 1.8 38 9-46 187-231 (724)
34 PRK00413 thrS threonyl-tRNA sy 46.5 15 0.00038 15.9 2.2 62 12-74 221-290 (639)
35 PRK11789 N-acetyl-anhydromuran 44.7 20 0.0005 15.2 4.5 10 321-330 117-126 (186)
36 PRK04483 threonyl-tRNA synthet 44.0 20 0.00052 15.1 2.8 62 12-74 224-293 (634)
37 COG3023 ampD N-acetyl-anhydrom 34.4 29 0.00073 14.2 3.7 26 321-346 111-140 (257)
38 PRK01153 nicotinamide-nucleoti 33.3 30 0.00076 14.1 4.0 51 118-168 14-64 (170)
39 COG1029 FwdB Formylmethanofura 30.8 33 0.00084 13.8 2.0 159 40-218 53-224 (429)
40 cd04392 RhoGAP_ARHGAP19 RhoGAP 27.3 38 0.00097 13.4 1.9 30 4-33 3-32 (208)
41 COG0441 ThrS Threonyl-tRNA syn 22.2 47 0.0012 12.9 2.8 64 12-75 172-243 (589)
42 cd01979 Pchlide_reductase_N Pc 20.3 35 0.0009 13.6 0.5 84 51-143 10-99 (396)
No 1
>TIGR01436 glu_cys_lig_pln glutamate--cysteine ligase; InterPro: IPR011556 These sequences represent one of two highly dissimilar forms of glutamate--cysteine ligase (gamma-glutamylcysteine synthetase), an enzyme of glutathione biosynthesis. The other group is represented by IPR006335 from INTERPRO. This form is found in plants (with a probable transit peptide), root nodule and other bacteria, but not Escherichia coli and closely related species. ; GO: 0004357 glutamate-cysteine ligase activity, 0006750 glutathione biosynthetic process, 0009507 chloroplast.
Probab=100.00 E-value=0 Score=830.61 Aligned_cols=445 Identities=48% Similarity=0.899 Sum_probs=438.0
Q ss_pred HHCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCC
Q ss_conf 21489999999983798720355867776538747657848711223499999975552488646127841023345688
Q gi|254781161|r 10 IVTSIDDLVQHIASGIKPQEEFRIGTEHESFIFSRADHRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIGLANPLSK 89 (457)
Q Consensus 10 ~~~~~~~l~~~f~~g~k~~~~~~IG~E~E~flvd~~~~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~~ 89 (457)
+|+..|+|+.||++|||+|..+|||+|||+|++.+.+++|++|++..||.++|.-+.++|+|+++.++..+|+|.. ++
T Consensus 1 P~~~rddL~~yl~aGckpK~qwRiGTEHEKfgf~k~~l~p~~Ye~~~GI~~LLng~a~RfgWq~v~E~dkiIgL~~--d~ 78 (446)
T TIGR01436 1 PVTRRDDLVAYLEAGCKPKEQWRIGTEHEKFGFKKRDLRPIKYEEKAGIAELLNGIAERFGWQKVEEDDKIIGLKK--DD 78 (446)
T ss_pred CCCCHHHHHHHHHCCCCCHHCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCEEEEEEC--CC
T ss_conf 9873889999997378820310246400002223146679885555567899888764406724544887888626--88
Q ss_pred CCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 70341354202420110101567788888878887874210387342105687888454200000135666665432112
Q gi|254781161|r 90 AGISIEPGGQLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKKYMPQVGT 169 (457)
Q Consensus 90 ~~it~ep~~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m~~~~~~~g~ 169 (457)
++||+|||||+|+|++|..+||+.++|...|+..+.+++++.|++++|+|..|.+++.|++++||.||++|.+||+++|+
T Consensus 79 ~sisLEPgGQfELSGAPl~TiHet~dEin~Hl~Q~~ev~~emg~gFlGlG~qPkwrr~DiP~MPKGRY~IMr~YmPkvG~ 158 (446)
T TIGR01436 79 ASISLEPGGQFELSGAPLETIHETYDEINEHLYQVKEVAEEMGLGFLGLGLQPKWRREDIPLMPKGRYKIMRDYMPKVGK 158 (446)
T ss_pred CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
T ss_conf 14764686421015561346663289998899999999876162010355466654478888987525888624787786
Q ss_pred HHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 67888763134047514789889999999998765678887437865588778743226888520277788656544577
Q gi|254781161|r 170 HGLDMMFRTCTTQVSLDFSSEHDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSWRSEIWRHTDSDRTEILPFILRD 249 (457)
Q Consensus 170 ~~~~mm~~tas~Qv~id~~~~~d~~~~~n~a~~l~P~llAL~aNSPf~~G~~~g~~s~R~~i~~~~d~~r~~~~~~~~~~ 249 (457)
++++||..||++|+|+||+||+|+|+||++..+|.|+..||||||||.+||++|+.|+|.+||.+||++|||.+|++|++
T Consensus 159 LgLDMMlRTCTvQ~N~DfsSEADMv~KFR~slALQPlatALFANSPFlEGkPNGFlSyRshIWtdTDpdRtG~LPFVFdd 238 (446)
T TIGR01436 159 LGLDMMLRTCTVQANLDFSSEADMVKKFRVSLALQPLATALFANSPFLEGKPNGFLSYRSHIWTDTDPDRTGILPFVFDD 238 (446)
T ss_pred CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
T ss_conf 22456654524430566340577889987765556899998537866687878754355354668887655566644307
Q ss_pred CCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf 54199999998514531630587532667888788512643210136554667753112345664333550121157888
Q gi|254781161|r 250 NSNFEHYAQWALDIPMYFILRKKEYYCCTDITFRQFMNGALKGRIKEWHPTLEDWENHLSTLFPAVRLRNCLEMRGADSG 329 (457)
Q Consensus 250 ~~~~e~y~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~d~~~~~~~~f~~~r~~~~IEiR~~Ds~ 329 (457)
.|+|++|++|++++||+|+.+++++++.++.+|+.|+.|++|.+ ....|++.||..|+||.||+||+|.|+|+|.+|++
T Consensus 239 ~FGferY~dYaLdvPMyF~Yrkg~Yid~~G~~FRaFl~GklPal-Pge~P~l~DW~~HLsT~FPeVRLK~YLEmRGADgg 317 (446)
T TIGR01436 239 DFGFERYVDYALDVPMYFVYRKGKYIDASGVDFRAFLEGKLPAL-PGELPILSDWEDHLSTLFPEVRLKRYLEMRGADGG 317 (446)
T ss_pred CCCHHHHHHHHHCCCCEEEEECCEEEECCCCCHHHHHCCCCCCC-CCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCC
T ss_conf 77789999987158602145165034057764588728888888-78887654414354024751121112211266754
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC-CHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 86675555888988765388544323202369999999999999763115866883-08999999999999989852312
Q gi|254781161|r 330 RLENIFAVAAFWTGILYDSSALQNADHLTSSWSFYDINKLNNTVPSKGMRSTVRGQ-SLKDIAIQILTFAHQGLKNRSAK 408 (457)
Q Consensus 330 P~~~~~a~aAf~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~~~~~-~~~~l~~~ll~~A~~GL~~r~~~ 408 (457)
|....||.+|||.||+|+..+|..+.+.+..|+.++++..+..+.+.||.+-+.+. .++++..+++++|+++|+||+..
T Consensus 318 ~~~~lcAlpAfW~glLyD~~~L~aa~D~~k~Ws~~er~~lrnevP~~gLkTl~~~g~sl~~lg~~vl~la~d~L~Rrg~~ 397 (446)
T TIGR01436 318 SARRLCALPAFWVGLLYDEEALDAALDLVKDWSMEERERLRNEVPKKGLKTLIRDGISLKDLGRDVLKLAKDALKRRGIK 397 (446)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHH
T ss_conf 43213113677777863367899999886238988998776521421311668762679999999999998877501011
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCC
Q ss_conf 4556458899999999998389858999998710221888999887679
Q gi|254781161|r 409 NHLQEDETIFLKPLEKIIHNNQTTADEMLAAYHTRWGKSIDPCFEEYAY 457 (457)
Q Consensus 409 ~~~~~dE~~yL~~l~~~i~~g~t~A~~~l~~y~~~~~~~i~~i~~~~~~ 457 (457)
+..|.||..||++|.++|++|+||||++|++|++.|+++|+.||+|+-|
T Consensus 398 na~G~DES~fL~p~~~~ve~g~tpaerLLe~Y~g~w~~~vdp~f~E~~~ 446 (446)
T TIGR01436 398 NAKGQDESIFLDPVDEVVESGQTPAERLLEAYKGEWRQAVDPVFEELEY 446 (446)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCC
T ss_conf 0579844556535788872699878999998657788512134541039
No 2
>COG3572 GshA Gamma-glutamylcysteine synthetase [Coenzyme metabolism]
Probab=100.00 E-value=0 Score=686.06 Aligned_cols=456 Identities=51% Similarity=0.924 Sum_probs=448.8
Q ss_pred CCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCE
Q ss_conf 98774331121489999999983798720355867776538747657848711223499999975552488646127841
Q gi|254781161|r 1 MTCNPLANTIVTSIDDLVQHIASGIKPQEEFRIGTEHESFIFSRADHRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNI 80 (457)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~f~~g~k~~~~~~IG~E~E~flvd~~~~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~ 80 (457)
|...-.++..+++++.|.+++.+|+|++++++||+|+|+|.+-.+++.||||++..+|..+|.-+. +++|+|+.+.+++
T Consensus 1 ma~~~~~~~~~t~~~~L~~~~a~g~k~~~~~riGtEhEkf~f~l~g~~pv~~e~e~~i~a~L~g~~-r~gwepI~d~gn~ 79 (456)
T COG3572 1 MARDTTTETPLTSVAELTDYLAKGDKEKTDWRIGTEHEKFGFYLDGLSPVPYEGEAGIFALLDGMQ-RLGWEPIMDVGNI 79 (456)
T ss_pred CCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCCHHCCCCEEECCCCCCCCCCCCCHHHHHHHHH-HCCCEEECCCCCE
T ss_conf 975522302332299999986168975312101100013543415899988664102677755563-1684020245654
Q ss_pred ECCCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHH
Q ss_conf 02334568870341354202420110101567788888878887874210387342105687888454200000135666
Q gi|254781161|r 81 IGLANPLSKAGISIEPGGQLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLM 160 (457)
Q Consensus 81 ~~l~~~~~~~~it~ep~~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m 160 (457)
|+|.....+..||+|||||+|+|++|..++++++.+..+|+.+++.++.+.|++++|+|.||.|.+.+.+.+||.||++|
T Consensus 80 I~L~~p~g~~aIslEpggq~Elsgapletihq~~~e~n~hlavlr~~a~~~gl~fvGlG~~Pkw~r~e~p~mpk~RY~iM 159 (456)
T COG3572 80 IGLVEPIGQGAISLEPGGQFELSGAPLETIHQTCGEMNQHLAVLREIAAELGLGFVGLGGSPKWTRAEVPVMPKSRYAIM 159 (456)
T ss_pred EEECCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHH
T ss_conf 55315788842796468547854785688999999988789999998876187368615898645476888970489999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCC
Q ss_conf 66543211267888763134047514789889999999998765678887437865588778743226888520277788
Q gi|254781161|r 161 KKYMPQVGTHGLDMMFRTCTTQVSLDFSSEHDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSWRSEIWRHTDSDRT 240 (457)
Q Consensus 161 ~~~~~~~g~~~~~mm~~tas~Qv~id~~~~~d~~~~~n~a~~l~P~llAL~aNSPf~~G~~~g~~s~R~~i~~~~d~~r~ 240 (457)
..||+++|..+++||..||++|||+|+.+++|+.+++|++.++.|+..||||||||.+|+++|+.|+|..||..+|+.||
T Consensus 160 ~~Ympkvg~~glDMm~rtctiQVNLD~sse~dm~rk~rvs~~Lqp~ataLFANSpFtegkpng~lS~R~~iW~dtd~~r~ 239 (456)
T COG3572 160 TRYMPKVGVKGLDMMTRTCTIQVNLDFSSETDMRRKMRVSLALQPLATALFANSPFTEGKPNGLLSWRGDIWRDTDPQRS 239 (456)
T ss_pred HHHHHHCCCCCHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCC
T ss_conf 99876528831555531011587523673034999999986541899999706976579876411066445420674214
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
Q ss_conf 65654457754199999998514531630587532667888788512643210136554667753112345664333550
Q gi|254781161|r 241 EILPFILRDNSNFEHYAQWALDIPMYFILRKKEYYCCTDITFRQFMNGALKGRIKEWHPTLEDWENHLSTLFPAVRLRNC 320 (457)
Q Consensus 241 ~~~~~~~~~~~~~e~y~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~d~~~~~~~~f~~~r~~~~ 320 (457)
|..+..|.+.++|.+|++|.+++|++|+.+++.+++...++|.+|+++.+++....+.||..||..|+|+.||+||+|++
T Consensus 240 G~l~~~f~d~fgf~dY~~~aldvpmyfv~r~~~y~d~~~~sfr~f~~gal~gel~~~~pt~~D~~~HlstlFpdVrlk~~ 319 (456)
T COG3572 240 GVLPFAFSDDFGFIDYVNYALDVPMYFVRRTGHYHDCAHVSFRQFMAGALKGELPGRRPTMKDWTNHLSTLFPDVRLKRF 319 (456)
T ss_pred CCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCEECCCEEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHCE
T ss_conf 55532026887789999876337279961577340242135787760214566664567333566554432887411014
Q ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 12115788886675555888988765388544323202369999999999999763115866883089999999999999
Q gi|254781161|r 321 LEMRGADSGRLENIFAVAAFWTGILYDSSALQNADHLTSSWSFYDINKLNNTVPSKGMRSTVRGQSLKDIAIQILTFAHQ 400 (457)
Q Consensus 321 IEiR~~Ds~P~~~~~a~aAf~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~~~~~~~~~l~~~ll~~A~~ 400 (457)
+|+|++|+||++.+||++|||.||+|+..+++.+.+.+++|..+++..++..+.++||.+.+.+.++.++++++|++++.
T Consensus 320 lEmRgad~gP~~r~cAlpAfwvGLLyd~~aLdAa~dl~~~~~~~e~~alR~~vp~~~l~~~~~~~t~~~iA~~~l~is~~ 399 (456)
T COG3572 320 LEMRGADSGPWRRICALPAFWVGLLYDPEALDAAEDLTKDWTYEEVLALRNAVPKKGLAAEFAGNTLLEIAKDVLPISRI 399 (456)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 67613567871233342778888734798899999855661178999998752321212043037299999988889888
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCC
Q ss_conf 898523124556458899999999998389858999998710221888999887679
Q gi|254781161|r 401 GLKNRSAKNHLQEDETIFLKPLEKIIHNNQTTADEMLAAYHTRWGKSIDPCFEEYAY 457 (457)
Q Consensus 401 GL~~r~~~~~~~~dE~~yL~~l~~~i~~g~t~A~~~l~~y~~~~~~~i~~i~~~~~~ 457 (457)
||+.|.+.+..+.+|+.||++|++++..|+|.|++++..|++.|+++|++||.+++|
T Consensus 400 GL~~R~~~N~d~~det~~L~~Ldev~a~g~t~Ae~~l~~y~g~w~~~~~~vf~~~~y 456 (456)
T COG3572 400 GLKNRLVLNGDGGDETIFLDPLDEVLAGGTTIAEAMLSLYHGAWGGSIEPVFNEYAY 456 (456)
T ss_pred HHHHHHHHCCCCCCCCHHCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHCC
T ss_conf 888887653775415043155999986488559999987506557863466674249
No 3
>TIGR03444 gshA_related glutamate--cysteine ligase family protein. Members of this bacterial protein family bear homology to glutamate--cysteine ligase, an enzyme in the two-step pathway of glutathione (GSH) biosynthesis, but are distinctly different. Among the bacterial genomes that carry the uncharacterized methyltransferase (TIGR03438) and conserved hypothetical protein TIGR03440, this protein is found in a subset, always in the vicinity of these other genes. Conserved hypothetical protein TIGR03442 is found in these same genomes. The role of this cassette is probably biosynthetic, but the product is unknown.
Probab=100.00 E-value=0 Score=535.66 Aligned_cols=383 Identities=25% Similarity=0.339 Sum_probs=318.5
Q ss_pred HHHHCCC-CCCCCEEEEEEEEEEEECCC-CCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCEEECCC
Q ss_conf 9983798-72035586777653874765-784871122349999997555248864612784102334568870341354
Q gi|254781161|r 20 HIASGIK-PQEEFRIGTEHESFIFSRAD-HRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIGLANPLSKAGISIEPG 97 (457)
Q Consensus 20 ~f~~g~k-~~~~~~IG~E~E~flvd~~~-~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~~~~it~ep~ 97 (457)
|+...|+ .-+...||+|+|++++|..+ .+|++-. .....++.....--.......-+.+++||+|||
T Consensus 1 ~~~~~cfk~gpp~~vG~ElEw~v~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~lpgGs~ITlEPG 69 (390)
T TIGR03444 1 YIGGVCFKDGPPGLVGLELEWLTVQTPAAHCPDLAA-----------PTRRPSPHRIRAVIPGSPAPPLPGGSRITVEPG 69 (390)
T ss_pred CCCCEECCCCCCCEEEEEEEEEECCCCCCCCCCCCC-----------CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 927651688998613687888750467666888653-----------112678555543356788887999984776788
Q ss_pred CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHH-HHHHHHHHHH
Q ss_conf 202420110101567788888878887874210387342105687888454200000135666665432-1126788876
Q gi|254781161|r 98 GQLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKKYMPQ-VGTHGLDMMF 176 (457)
Q Consensus 98 ~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m~~~~~~-~g~~~~~mm~ 176 (457)
||+|+|++|+.++++++.++..++..+..++.+.|++++++|++|++. ..+++||+||++|..||++ +|..|++||+
T Consensus 70 GQlELSgaPl~sl~e~~~e~~~~l~~l~~~~~~~gl~~~glG~dP~r~--~~~~~pk~RY~iM~~ym~~~~G~~G~~MM~ 147 (390)
T TIGR03444 70 GQLELSGPPADGLTAAVAALAADLAVLRAALAEDGLALVGLGADPLRP--PRRVLPGPRYRAMEQFFATGIGPFGALMMC 147 (390)
T ss_pred CCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCC--CCCCCCCHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 613534243058999999999999999999997797089744598997--433587058999999852446816899986
Q ss_pred HHCCCEEEECCC-CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 313404751478-9889999999998765678887437865588778743226888520277788656544577541999
Q gi|254781161|r 177 RTCTTQVSLDFS-SEHDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSWRSEIWRHTDSDRTEILPFILRDNSNFEH 255 (457)
Q Consensus 177 ~tas~Qv~id~~-~~~d~~~~~n~a~~l~P~llAL~aNSPf~~G~~~g~~s~R~~i~~~~d~~r~~~~~~~~~~~~~~e~ 255 (457)
.|||+|||+||. +++|+++|++++.+|.|+++||||||||++|+++||.|+|+.+|+++|+.|||.+ ..+.....+++
T Consensus 148 ~TatvQVNlD~~see~D~~~K~rla~aL~Pv~tAlFANSPf~eGk~tG~~S~R~~iW~~tD~~RtG~~-~~~~~~~~~e~ 226 (390)
T TIGR03444 148 STASVQVNLDAGTDPAEWAERWRLAHALGPVLIAAFANSPALGGRPTGWRSTRQRVWGQLDAARTGPV-LAASGDDPADD 226 (390)
T ss_pred HCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHCCCCCCCCCC-CCCCCCCCHHH
T ss_conf 11425786268998889999999998887999999947921128878840089999815599988887-31467898899
Q ss_pred HHHHHHHCCCEEEC--CCCCCCCCC-CCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCCHH
Q ss_conf 99998514531630--587532667-888788512643210136554667753112345664333550121157888866
Q gi|254781161|r 256 YAQWALDIPMYFIL--RKKEYYCCT-DITFRQFMNGALKGRIKEWHPTLEDWENHLSTLFPAVRLRNCLEMRGADSGRLE 332 (457)
Q Consensus 256 y~~~~~~~~~i~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~t~~d~~~~~~~~f~~~r~~~~IEiR~~Ds~P~~ 332 (457)
|++|++++|++|+. +++.++... +.+|++|+.|+.+ ...+.||..||.+|++|+||+||+|++||+|++|+||.+
T Consensus 227 y~~yaLdvPm~fv~~~~d~~~~~~~~g~tFrdf~~G~~~--~~g~~PT~~Dw~~HLsTlFPeVRlK~yLE~R~aDa~p~~ 304 (390)
T TIGR03444 227 WARYALDAPLMCVRNPDDGEPVPVTDGVTFADWVAGRDP--VIGRRPTRADLDYHLTTLFPPVRPRGWLELRYLDAQPGD 304 (390)
T ss_pred HHHHHHCCCEEEEEECCCCCEEECCCCCCHHHHHCCCCC--CCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCC
T ss_conf 999997598699986588952447899779999668877--789999989999875237986555563475016778813
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 75555888988765388544323202369999999999999763115866883089999999999999898523124556
Q gi|254781161|r 333 NIFAVAAFWTGILYDSSALQNADHLTSSWSFYDINKLNNTVPSKGMRSTVRGQSLKDIAIQILTFAHQGLKNRSAKNHLQ 412 (457)
Q Consensus 333 ~~~a~aAf~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~~~~~~~~~l~~~ll~~A~~GL~~r~~~~~~~ 412 (457)
.+++++|||+||+|+..+++.+.+.+.++ ...+..|+|.||. +..++..+..++.+|.+|+..
T Consensus 305 ~~~a~~A~~~gLlyD~~a~~~A~~~~~~~-----a~~w~~aaR~gl~----d~~L~~aa~~~~~~a~~~~~~-------- 367 (390)
T TIGR03444 305 GWPVPVATLTALLDDPVAAAEAAEAAAPV-----ATRWDDAARLGLA----DRELRAAAVRCLDLAAARAPT-------- 367 (390)
T ss_pred CCCHHHHHHHHHHCCHHHHHHHHHHHHHH-----HHHHHHHHHHCCC----CHHHHHHHHHHHHHHHHCCCH--------
T ss_conf 00099999999842898999999984789-----8889999985136----889999999999999704982--------
Q ss_pred CCHHHHHHHHHHHHHCCCCCHHH
Q ss_conf 45889999999999838985899
Q gi|254781161|r 413 EDETIFLKPLEKIIHNNQTTADE 435 (457)
Q Consensus 413 ~dE~~yL~~l~~~i~~g~t~A~~ 435 (457)
.-...-+..++..++.|++|||.
T Consensus 368 ~~~~a~~~~~~r~~~rgr~Padd 390 (390)
T TIGR03444 368 ELAEAVLDLAARYVDRGRCPADE 390 (390)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 77899999999888637999998
No 4
>PRK13517 carboxylate-amine ligase; Provisional
Probab=100.00 E-value=0 Score=431.33 Aligned_cols=353 Identities=13% Similarity=0.123 Sum_probs=305.5
Q ss_pred CCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCEEECCC-CCEEEEC
Q ss_conf 872035586777653874765784871122349999997555248864612784102334568870341354-2024201
Q gi|254781161|r 26 KPQEEFRIGTEHESFIFSRADHRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIGLANPLSKAGISIEPG-GQLELST 104 (457)
Q Consensus 26 k~~~~~~IG~E~E~flvd~~~~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~~~~it~ep~-~qlE~s~ 104 (457)
++++.++||+|.|++|||..+..|+|. +.++|..+....+ +..++.|.. +|||+.+
T Consensus 4 ~~s~~~TlGvEeE~~LVD~~t~~l~~~-----a~~vl~~~~~~~~------------------~~~v~~El~~~~iEi~t 60 (371)
T PRK13517 4 AGSPRPTLGVEEEFLLVDPVTGELSPR-----ATEVLAEAGENGP------------------EPRLQKELLRNTVEVVT 60 (371)
T ss_pred CCCCCCCCEEEEEEEEECCCCCCCCCC-----HHHHHHHHHHCCC------------------CCCCCHHHHHHEEEECC
T ss_conf 999999616032143344786785664-----4999997343047------------------76757565501688668
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 10101567788888878887874210387342105687888454200000135666665432112678887631340475
Q gi|254781161|r 105 TTLQNVHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKKYMPQVGTHGLDMMFRTCTTQVS 184 (457)
Q Consensus 105 ~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m~~~~~~~g~~~~~mm~~tas~Qv~ 184 (457)
+||.++.++.+++...+..+..++..+|+++++.|+||+..+.++.+++++||+.|.+.++..+... .+||+|||
T Consensus 61 ~~~~~~~el~~~L~~~r~~l~~aA~~~G~~l~a~GthP~~~~~~~~~t~~~RY~~l~~~~~~~~~~~-----~i~G~HVH 135 (371)
T PRK13517 61 GVCDTVGEAREDLRRTRAVARRAADRRGARLAAAGTHPFSPWSDQPLTDNPRYRELIERTQWWAREQ-----LICGVHVH 135 (371)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-----HHHEEEEE
T ss_conf 7779999999999999999999999859978722677888865577896478999999999999876-----14025798
Q ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 14789889999999998765678887437865588778743226888520277788656544577541999999985145
Q gi|254781161|r 185 LDFSSEHDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSWRSEIWRHTDSDRTEILPFILRDNSNFEHYAQWALDIP 264 (457)
Q Consensus 185 id~~~~~d~~~~~n~a~~l~P~llAL~aNSPf~~G~~~g~~s~R~~i~~~~d~~r~~~~~~~~~~~~~~e~y~~~~~~~~ 264 (457)
|++.|++.+++.+|.++.++|+++|||||||||.|++||+.|+|..+|++++..+. |..|.++..|++|++.+..++
T Consensus 136 Vgv~d~e~av~v~n~lr~~lP~lLALSAnSPf~~G~DTG~aS~R~~~f~~~P~~G~---p~~f~s~~~y~~~v~~l~~~G 212 (371)
T PRK13517 136 VGVPSREKAVPVLNRLRPWLPHLLALSANSPFWRGADTGYASNRAMLFQQWPTAGP---PPQFGSWAEYEAFVADLLKTG 212 (371)
T ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC---CCCCCCHHHHHHHHHHHHHCC
T ss_conf 34798899999999999998999998438953068667634579999974888899---965489899999999998639
Q ss_pred CEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCC-HHHHHHHHHHHHH
Q ss_conf 316305875326678887885126432101365546677531123456643335501211578888-6675555888988
Q gi|254781161|r 265 MYFILRKKEYYCCTDITFRQFMNGALKGRIKEWHPTLEDWENHLSTLFPAVRLRNCLEMRGADSGR-LENIFAVAAFWTG 343 (457)
Q Consensus 265 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~d~~~~~~~~f~~~r~~~~IEiR~~Ds~P-~~~~~a~aAf~~g 343 (457)
+|... ++.||..|+ ...++|||+|+||+|| ++++.+++||+.+
T Consensus 213 ~i~d~-------------------------------~~iwWdvRP-----s~~~~TvE~Rv~D~~~~~~d~~aiaal~~a 256 (371)
T PRK13517 213 VILDE-------------------------------GMVYWDIRP-----SPNFGTVEVRVADVPLTLRETVALAALVRC 256 (371)
T ss_pred CCCCC-------------------------------CCEEEEECC-----CCCCCCCEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 72878-------------------------------827986166-----788885235405888999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC------CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf 76538854432320236999999999999976311586688------308999999999999989852312455645889
Q gi|254781161|r 344 ILYDSSALQNADHLTSSWSFYDINKLNNTVPSKGMRSTVRG------QSLKDIAIQILTFAHQGLKNRSAKNHLQEDETI 417 (457)
Q Consensus 344 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~~~~------~~~~~l~~~ll~~A~~GL~~r~~~~~~~~dE~~ 417 (457)
|+..+....+.....+..+.+.+++|+|+|+|+||+|.+.+ .++.+++.+|++.....|+..|. ..
T Consensus 257 Lv~~~~~~~~~g~~~~~~~~~l~~~n~wrAaR~Gl~g~lid~~~~~~~p~~~~l~~Ll~~~~p~a~~lG~--------~~ 328 (371)
T PRK13517 257 LVVTADRRLDAGEPLPTLPPWHLQENKWRAARYGLDAEIIDDADGNERPATDDLRDLLERLRPVARELGC--------AD 328 (371)
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCC--------HH
T ss_conf 9999998887599998889999999999999849898024488996857999999999999999998799--------99
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHC
Q ss_conf 999999999838985899999871022188899988767
Q gi|254781161|r 418 FLKPLEKIIHNNQTTADEMLAAYHTRWGKSIDPCFEEYA 456 (457)
Q Consensus 418 yL~~l~~~i~~g~t~A~~~l~~y~~~~~~~i~~i~~~~~ 456 (457)
+|..+.+++++| |+|+||++.|++. +++..|.+..+
T Consensus 329 ~l~~~~~il~~G-tgA~rQR~~~~~~--g~l~~VV~~l~ 364 (371)
T PRK13517 329 ELAGVAEILRRG-AGYQRQRRAAERH--GDLRAVVDALV 364 (371)
T ss_pred HHHHHHHHHHHC-CHHHHHHHHHHHC--CCHHHHHHHHH
T ss_conf 999999998727-8899999999826--99999999999
No 5
>PRK13515 carboxylate-amine ligase; Provisional
Probab=100.00 E-value=0 Score=422.16 Aligned_cols=352 Identities=17% Similarity=0.222 Sum_probs=301.2
Q ss_pred CCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHH-HHHCCCCEEECCCCEECCCCCCCCCCEEECCC-CCEEEEC
Q ss_conf 720355867776538747657848711223499999975-55248864612784102334568870341354-2024201
Q gi|254781161|r 27 PQEEFRIGTEHESFIFSRADHRPLPYDGEKSIVTILQAI-QKKLAWKEIMDKGNIIGLANPLSKAGISIEPG-GQLELST 104 (457)
Q Consensus 27 ~~~~~~IG~E~E~flvd~~~~~p~~~~~~~~i~~~L~~l-~~~~~~~~~~~~~~~~~l~~~~~~~~it~ep~-~qlE~s~ 104 (457)
.+++++||+|.|++|||+.+...++ ++.++|... .+. .+..++-|.. +|||+.+
T Consensus 2 ~~p~~TlGVEeE~~LvD~~t~~l~~-----~a~~~l~~~~~~~-------------------~~~~v~~El~~~qiEi~T 57 (381)
T PRK13515 2 ADPEFTFGIEEEYLLVDAETLDLAR-----SAPAALMEACRDA-------------------LGEQFAPEMLQSQIEVGT 57 (381)
T ss_pred CCCCCCCEEEEEEEEECCCCCCCCC-----CHHHHHHHHHHHH-------------------CCCCCCHHHHHCEEEECC
T ss_conf 9999874523446667588656675-----2389999853331-------------------256667566623799468
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 10101567788888878887874210387342105687888454200000135666665432112678887631340475
Q gi|254781161|r 105 TTLQNVHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKKYMPQVGTHGLDMMFRTCTTQVS 184 (457)
Q Consensus 105 ~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m~~~~~~~g~~~~~mm~~tas~Qv~ 184 (457)
++|.++.++.+++...+..+..++..+|+++++.|+||++.|.++.+++++||+.|.+.++..+.... +||+|||
T Consensus 58 ~v~~~~~e~~~~L~~~r~~l~~aA~~~g~~l~a~GthP~~~w~~~~~t~~~RY~~l~~~~~~~a~~~~-----i~G~HVH 132 (381)
T PRK13515 58 PVCATLAEAREELGRLRQRLAELAAQFGLRIIAAGTHPFADWRRQRPTPKERYAQLFEDLGGVARRSL-----ICGMHVH 132 (381)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-----HEEEEEE
T ss_conf 77799999999999999999999998698898307898888766878960789999999999998643-----2423898
Q ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 14789889999999998765678887437865588778743226888520277788656544577541999999985145
Q gi|254781161|r 185 LDFSSEHDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSWRSEIWRHTDSDRTEILPFILRDNSNFEHYAQWALDIP 264 (457)
Q Consensus 185 id~~~~~d~~~~~n~a~~l~P~llAL~aNSPf~~G~~~g~~s~R~~i~~~~d~~r~~~~~~~~~~~~~~e~y~~~~~~~~ 264 (457)
|+++|.+.++.++|.+..+.|+++|||||||||.|++|||.|+|..+|+++++.+. |..|.++..|++|++.++.++
T Consensus 133 Vgv~d~e~av~v~n~lr~~LP~LLALSAsSPFw~G~DTG~aS~R~~~~~~~P~aG~---P~~f~s~~~y~~~v~~l~~tG 209 (381)
T PRK13515 133 VGVPDSEDRMALMNQVLYFLPHLLALSTSSPFWGGRDTGLKSYRRAIFGELPRTGL---PPLFPSWAEYQRYVALLVRTG 209 (381)
T ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC---CCCCCCHHHHHHHHHHHHHCC
T ss_conf 36898899999999999888999999708931047877644168768864888899---977689999999999998659
Q ss_pred CEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCC-HHHHHHHHHHHHH
Q ss_conf 316305875326678887885126432101365546677531123456643335501211578888-6675555888988
Q gi|254781161|r 265 MYFILRKKEYYCCTDITFRQFMNGALKGRIKEWHPTLEDWENHLSTLFPAVRLRNCLEMRGADSGR-LENIFAVAAFWTG 343 (457)
Q Consensus 265 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~d~~~~~~~~f~~~r~~~~IEiR~~Ds~P-~~~~~a~aAf~~g 343 (457)
+|.... ..||..|+ ...++|||+|+||+|| .+++.+++||+.+
T Consensus 210 ~i~d~~-------------------------------~i~WdvRP-----s~~~pTlEvRv~D~~~~~~~~~~iAal~ra 253 (381)
T PRK13515 210 CIDDDG-------------------------------KIWWDLRP-----SPRFPTLELRICDVCPRLDDALALAALFRA 253 (381)
T ss_pred CCCCCC-------------------------------EEEEEECC-----CCCCCCEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 968788-------------------------------05898257-----899996257506887999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC------CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf 76538854432320236999999999999976311586688------308999999999999989852312455645889
Q gi|254781161|r 344 ILYDSSALQNADHLTSSWSFYDINKLNNTVPSKGMRSTVRG------QSLKDIAIQILTFAHQGLKNRSAKNHLQEDETI 417 (457)
Q Consensus 344 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~~~~------~~~~~l~~~ll~~A~~GL~~r~~~~~~~~dE~~ 417 (457)
|+..+..........+..+.+.+++|+|+|+|+||++.+.+ .++++++++|++...+.+++.|. ..
T Consensus 254 Lv~~~~~~~~~g~~~~~~~~~l~~en~WrAaR~Gldg~lid~~~~~~~pa~~~l~~Ll~~v~p~a~~lG~--------~~ 325 (381)
T PRK13515 254 LVRHLYRLRRDNLTFRVYRRALIEENKWRAQRYGLDGKLIDFGKQRPVPARELLEELIEQIAEDADALGS--------EA 325 (381)
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCC--------HH
T ss_conf 9999998787599998657999999999999739998055178996867999999999998999998799--------99
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHH------HCCCHHHHHHHH
Q ss_conf 99999999983898589999987102------218889998876
Q gi|254781161|r 418 FLKPLEKIIHNNQTTADEMLAAYHTR------WGKSIDPCFEEY 455 (457)
Q Consensus 418 yL~~l~~~i~~g~t~A~~~l~~y~~~------~~~~i~~i~~~~ 455 (457)
+|+.+++++++| |+|++|++.|+.. -.++++.|.+.+
T Consensus 326 ~l~~l~~il~~G-t~A~RQr~~~~~~~~~~~~~~g~l~~VVd~l 368 (381)
T PRK13515 326 EVEHARTILEEG-TSADRQLRVYAEARAAGLGRGGALRAVVDWL 368 (381)
T ss_pred HHHHHHHHHHHC-CHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
T ss_conf 999999998718-8499999999986421477667799999999
No 6
>PRK13516 carboxylate-amine ligase; Provisional
Probab=100.00 E-value=0 Score=412.53 Aligned_cols=352 Identities=16% Similarity=0.159 Sum_probs=293.6
Q ss_pred CCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCEEECC-CCCEEEEC
Q ss_conf 87203558677765387476578487112234999999755524886461278410233456887034135-42024201
Q gi|254781161|r 26 KPQEEFRIGTEHESFIFSRADHRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIGLANPLSKAGISIEP-GGQLELST 104 (457)
Q Consensus 26 k~~~~~~IG~E~E~flvd~~~~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~~~~it~ep-~~qlE~s~ 104 (457)
++++.+++|+|.|+++||+.+..+++. +.++|..+.... .+..+.-|. .+|||+.+
T Consensus 7 ~~S~~~T~GVEeE~~LvD~~t~~l~~~-----a~~vl~~~~~~~------------------~~~~v~~El~~~qvEi~T 63 (372)
T PRK13516 7 HVSEPFTLGVELELQVVNPHDYDLTQA-----SSDLLRAVKNQI------------------TAGEIKPEITESMIEIAT 63 (372)
T ss_pred CCCCCCCCEEEEEEEEECCCCCCCCCC-----HHHHHHHHCCCC------------------CCCCCCHHHHHHEEEECC
T ss_conf 999998216566687764897566754-----299999711343------------------566567476513478468
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 10101567788888878887874210387342105687888454200000135666665432112678887631340475
Q gi|254781161|r 105 TTLQNVHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKKYMPQVGTHGLDMMFRTCTTQVS 184 (457)
Q Consensus 105 ~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m~~~~~~~g~~~~~mm~~tas~Qv~ 184 (457)
++|.++.++.+++...+..+..++.++|+++++.|+||++.|.++.+++++||+.|.+.++..+.... +||+|||
T Consensus 64 ~v~~~~~e~~~~L~~~R~~l~~~A~~~g~~l~a~GthP~~~~~~~~it~~~RY~~l~~~~~~~a~~~~-----i~G~HVH 138 (372)
T PRK13516 64 GVCRDIDQALGQLSAMRDVLVQAADDLNLGICGGGTHPFQQWQRQRICDNPRFQYLSELYGYLAKQFT-----VFGQHVH 138 (372)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-----HHCEEEE
T ss_conf 36699999999999999999999998298776337898887554778962789999999999999884-----6102688
Q ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 14789889999999998765678887437865588778743226888520277788656544577541999999985145
Q gi|254781161|r 185 LDFSSEHDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSWRSEIWRHTDSDRTEILPFILRDNSNFEHYAQWALDIP 264 (457)
Q Consensus 185 id~~~~~d~~~~~n~a~~l~P~llAL~aNSPf~~G~~~g~~s~R~~i~~~~d~~r~~~~~~~~~~~~~~e~y~~~~~~~~ 264 (457)
|+++|.+.++..+|....++|+++|||||||||.|++|||.|+|..+|++++..+. |+.|.++..|++|++.++.++
T Consensus 139 Vgv~d~e~av~v~n~lr~~LP~LLALSAnSPFw~G~DTG~aS~R~~~~~~~P~aG~---pp~f~s~~~y~~~v~~L~~tG 215 (372)
T PRK13516 139 IGCPSGDDAIYLLHGLSRYVPHFIALSASSPYVQGVDTGFASARLNSVSAFPLSGR---APFVLNWQEFEAYFRKMSYTG 215 (372)
T ss_pred ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCC---CCCCCCHHHHHHHHHHHHHCC
T ss_conf 45797888999999988887899998428932057758750024657862878898---998699999999999998718
Q ss_pred CEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCC-HHHHHHHHHHHHH
Q ss_conf 316305875326678887885126432101365546677531123456643335501211578888-6675555888988
Q gi|254781161|r 265 MYFILRKKEYYCCTDITFRQFMNGALKGRIKEWHPTLEDWENHLSTLFPAVRLRNCLEMRGADSGR-LENIFAVAAFWTG 343 (457)
Q Consensus 265 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~d~~~~~~~~f~~~r~~~~IEiR~~Ds~P-~~~~~a~aAf~~g 343 (457)
+|.... +++|.+. +....+|||+|+||+|+ ++++.+++|++.+
T Consensus 216 ~i~d~~--------------------------------~i~WdvR----Ps~~~pTvEvRv~D~~~~~~~~~~iAaL~ra 259 (372)
T PRK13516 216 VIDSMK--------------------------------DFYWDIR----PKPEFGTVEVRVMDTPLTVERAAAIAGYIQA 259 (372)
T ss_pred CCCCCC--------------------------------CEEEEEC----CCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 737678--------------------------------2589833----6899996035403477999999999999999
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC------CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf 76538854432320236999999999999976311586688------308999999999999989852312455645889
Q gi|254781161|r 344 ILYDSSALQNADHLTSSWSFYDINKLNNTVPSKGMRSTVRG------QSLKDIAIQILTFAHQGLKNRSAKNHLQEDETI 417 (457)
Q Consensus 344 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~~~~------~~~~~l~~~ll~~A~~GL~~r~~~~~~~~dE~~ 417 (457)
|+..+. .+.......-++..+++|+|+|+|+||++.+.+ .++++++.+|++.....++..|. ..
T Consensus 260 Lv~~~~--~~~~~~~~~~~~~~~~~n~WrAaR~Gl~g~lid~~~~~~~p~~~~l~~ll~~v~p~a~~lG~--------~~ 329 (372)
T PRK13516 260 LARWLL--TERPFKPQEDDYLVYTFNRFQACRFGLEGVLVDPQTGERRPLAEDILRTLDRIAPHAEELGA--------SS 329 (372)
T ss_pred HHHHHH--HCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCC--------HH
T ss_conf 999999--64999987431889999999999749897245389995857999999999998999998799--------99
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHC
Q ss_conf 999999999838985899999871022188899988767
Q gi|254781161|r 418 FLKPLEKIIHNNQTTADEMLAAYHTRWGKSIDPCFEEYA 456 (457)
Q Consensus 418 yL~~l~~~i~~g~t~A~~~l~~y~~~~~~~i~~i~~~~~ 456 (457)
+|..+..++.+|.|+|++|.+.|++. +++..|..+++
T Consensus 330 ~v~~~~~~l~~ggs~a~rqR~~~~~~--g~l~dVV~~~~ 366 (372)
T PRK13516 330 ALEALRAQVKSGLNDAQWLREFFADG--GSLIELVRQQC 366 (372)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHCC--CCHHHHHHHHH
T ss_conf 99999999986789999999999827--99999999999
No 7
>pfam04107 GCS2 Glutamate-cysteine ligase family 2(GCS2). Also known as gamma-glutamylcysteine synthetase and gamma-ECS (EC:6.3.2.2). This enzyme catalyses the first and rate limiting step in de novo glutathione biosynthesis. Members of this family are found in archaea, bacteria and plants. May and Leaver discuss the possible evolutionary origins of glutamate-cysteine ligase enzymes in different organisms and suggest that it evolved independently in different eukaryotes, from an ancestral bacterial enzyme. They also state that Arabidopsis thaliana gamma-glutamylcysteine synthetase is structurally unrelated to mammalian, yeast and Escherichia coli homologues. In plants, there are separate cytosolic and chloroplast forms of the enzyme.
Probab=100.00 E-value=0 Score=404.82 Aligned_cols=291 Identities=32% Similarity=0.448 Sum_probs=251.3
Q ss_pred CEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCEEECCCCCEEEECCHHHHH
Q ss_conf 55867776538747657848711223499999975552488646127841023345688703413542024201101015
Q gi|254781161|r 31 FRIGTEHESFIFSRADHRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIGLANPLSKAGISIEPGGQLELSTTTLQNV 110 (457)
Q Consensus 31 ~~IG~E~E~flvd~~~~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~~~~it~ep~~qlE~s~~~~~~~ 110 (457)
.++|+|.|+++||+.+..+++..+ .++.. +.+++.+ ++..++.+|+||||++++||.++
T Consensus 1 ~t~GvEeE~~lvD~~t~~l~~~~~-----~~~~~--------------~~~~~~~--~~~~~~e~~~~qiEist~p~~~~ 59 (291)
T pfam04107 1 RTLGVEEEFGVVDLLGGDLRGWSP-----ILEDE--------------AKIGLSL--GGGFVKELPGGQVELSTPPLESL 59 (291)
T ss_pred CCEEEEEEEEEECCCCCCCCCCCH-----HHHHH--------------HCCCCCC--CCCEEECCCCCEEEECCHHHCCH
T ss_conf 963778878777589878788667-----88742--------------0025566--89653326898899714221899
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCH
Q ss_conf 67788888878887874210387342105687888454200000135666665432112678887631340475147898
Q gi|254781161|r 111 HQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKKYMPQVGTHGLDMMFRTCTTQVSLDFSSE 190 (457)
Q Consensus 111 ~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m~~~~~~~g~~~~~mm~~tas~Qv~id~~~~ 190 (457)
+++++++..++..+..+++++|+++++.|+||++.+.++.++||+||+.|.++++.+|..+++||.+||++||++|+.++
T Consensus 60 ~e~~~~l~~~~~~l~~~a~~~g~~l~~~Gt~P~~~~~~~~~~~~~RY~~m~~~~~~~g~~~~~mm~~g~hVhV~vd~~~e 139 (291)
T pfam04107 60 AEAAEEISQHREELRHVADELGLGLLGLGTHPFALRSRDPVMPKGRYRRMYEYMPRVGVYGRQMMVAGCHVQVNIDSSSE 139 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCH
T ss_conf 99999999999999999998298068227787788754776888425799999987533789897722258854788758
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECC
Q ss_conf 89999999998765678887437865588778743226888520277788656544577541999999985145316305
Q gi|254781161|r 191 HDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSWRSEIWRHTDSDRTEILPFILRDNSNFEHYAQWALDIPMYFILR 270 (457)
Q Consensus 191 ~d~~~~~n~a~~l~P~llAL~aNSPf~~G~~~g~~s~R~~i~~~~d~~r~~~~~~~~~~~~~~e~y~~~~~~~~~i~~~~ 270 (457)
++ ++++|.+++++|+++|||||||||+|++||+.|+|..+|+++|+. |.+| .|.++..|++|+++++++++|+..+
T Consensus 140 ~~-~~~~~~~~~~~P~llALsAnSPf~~G~dtG~~S~R~~iw~~~p~~--G~~p-~~~~~~~~~~yv~~ll~~~~i~~~~ 215 (291)
T pfam04107 140 AI-MAVLRLVRALLPVLLALSANSPFWGGRDTGYASTRALIFTQTPQA--GPLP-LAFEDGAFERYARYALDTGIIFVRR 215 (291)
T ss_pred HH-HHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHCCCCC--CCCC-CCCCHHHHHHHHHHHHCCCCEEECC
T ss_conf 89-999999988889999997298233588764131778987408999--9999-8798389999999997189769669
Q ss_pred CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 87532667888788512643210136554667753112345664333550121157888866755558889887653885
Q gi|254781161|r 271 KKEYYCCTDITFRQFMNGALKGRIKEWHPTLEDWENHLSTLFPAVRLRNCLEMRGADSGRLENIFAVAAFWTGILYDSSA 350 (457)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~d~~~~~~~~f~~~r~~~~IEiR~~Ds~P~~~~~a~aAf~~gl~~~~~~ 350 (457)
+. ++ +.+ .....++..||+.|.+|.||++|.|.++|+|++|++|....++.+|||.|++++..
T Consensus 216 ~~-~~-----------d~r----~~~~~~~t~E~r~~ds~~f~~vr~~~~~e~r~~d~~~~~~~~a~pa~~~~~l~~~~- 278 (291)
T pfam04107 216 RL-WW-----------DGR----PPGLPGETLELRIHDTTAFPPVRLRALLEARLLDAQPDWRLDALPAAWTVALLDDE- 278 (291)
T ss_pred CC-EE-----------ECC----CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHH-
T ss_conf 82-68-----------317----89899768899983046987999999999988741860124667775543540478-
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 4432320236999999999999976311
Q gi|254781161|r 351 LQNADHLTSSWSFYDINKLNNTVPSKGM 378 (457)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~aar~Gl 378 (457)
+.+|.|+|+|+||
T Consensus 279 ---------------~~en~wrA~R~gl 291 (291)
T pfam04107 279 ---------------AEENAWDAARYGL 291 (291)
T ss_pred ---------------HHHHHHHHHHCCC
T ss_conf ---------------8999999986289
No 8
>PRK13518 carboxylate-amine ligase; Provisional
Probab=100.00 E-value=0 Score=386.87 Aligned_cols=327 Identities=14% Similarity=0.125 Sum_probs=269.2
Q ss_pred CCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCEEECC-CCCEEEECCHHH
Q ss_conf 3558677765387476578487112234999999755524886461278410233456887034135-420242011010
Q gi|254781161|r 30 EFRIGTEHESFIFSRADHRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIGLANPLSKAGISIEP-GGQLELSTTTLQ 108 (457)
Q Consensus 30 ~~~IG~E~E~flvd~~~~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~~~~it~ep-~~qlE~s~~~~~ 108 (457)
-.+||||.|+++||..+ +++... .+.+++.... . ..+..+.-|. .+|+|+.+++|.
T Consensus 12 m~TlGVEEE~~LVD~~t-~~~~~~----~~~v~~~~~~----~--------------~~~~~v~~El~~~qvEi~T~vc~ 68 (357)
T PRK13518 12 MGTLGVEEEFFVVDEHG-RPTAGT----DELVYEGEPP----E--------------PLAGRLDHELFKFVIETQTPTLN 68 (357)
T ss_pred CCCCEEEEEEEEECCCC-CCCCCC----HHHHHHCCCC----C--------------CCCCCCCHHHHCCEEEECCCCCC
T ss_conf 78641446788877997-656674----6899823555----3--------------24565574665547994586769
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
Q ss_conf 15677888888788878742103873421056878884542000001356666654321126788876313404751478
Q gi|254781161|r 109 NVHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKKYMPQVGTHGLDMMFRTCTTQVSLDFS 188 (457)
Q Consensus 109 ~~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m~~~~~~~g~~~~~mm~~tas~Qv~id~~ 188 (457)
++.++.+++...+..+..++...|+++++.|+||++.|.++..++++||+.|.+.++..+.... +||+||||+++
T Consensus 69 ~~~e~~~~L~~~R~~l~~aA~~~G~~l~a~GThP~~~w~~~~it~~~RY~~l~~~~~~~ar~~l-----i~G~HVHVGv~ 143 (357)
T PRK13518 69 DVAAAPDALREVRDALVAHAEEHGFRIAAAGLHPGAKWRELEHAEKPRYRSQLDRIQYPQHRNT-----TAGLHIHVGVD 143 (357)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-----HEEEEEEECCC
T ss_conf 9999999999999999999998698899626898888776888997789999999889999874-----61037996179
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEE
Q ss_conf 98899999999987656788874378655887787432268885202777886565445775419999999851453163
Q gi|254781161|r 189 SEHDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSWRSEIWRHTDSDRTEILPFILRDNSNFEHYAQWALDIPMYFI 268 (457)
Q Consensus 189 ~~~d~~~~~n~a~~l~P~llAL~aNSPf~~G~~~g~~s~R~~i~~~~d~~r~~~~~~~~~~~~~~e~y~~~~~~~~~i~~ 268 (457)
+.+.++.++|.+..++|+++|||||||||.|++|||.|+|..+|+++++.+. |..|.++..|++|++.+..+++|..
T Consensus 144 d~e~av~v~n~lr~~LP~LlALSAnSPFw~G~DTG~aS~R~~~~~~~P~aG~---P~~f~s~~~y~~~v~~L~~tG~I~d 220 (357)
T PRK13518 144 DPDKAVWVANELRWHMPVLLALSANSPYWNGFDTGLASARAKIFEALPNTGM---PTAFEDYEAFQAFERRMVETGSIED 220 (357)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCC---CCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 7899999999888778999999717942048888751089999972764799---9544899999999999997398277
Q ss_pred CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCC-HHHHHHHHHHHHHHHHH
Q ss_conf 05875326678887885126432101365546677531123456643335501211578888-66755558889887653
Q gi|254781161|r 269 LRKKEYYCCTDITFRQFMNGALKGRIKEWHPTLEDWENHLSTLFPAVRLRNCLEMRGADSGR-LENIFAVAAFWTGILYD 347 (457)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~d~~~~~~~~f~~~r~~~~IEiR~~Ds~P-~~~~~a~aAf~~gl~~~ 347 (457)
.. .++|.+. +....+|||+|+||+|| .+++.+++|++.+|+..
T Consensus 221 ~~--------------------------------~i~WDiR----Ps~~~pTvEvRV~D~~~~~~~~~~lAaL~raLv~~ 264 (357)
T PRK13518 221 RG--------------------------------ELWYDVR----PHSGHGTVEVRAPDAQADPDVVLAFVEYAHALVTD 264 (357)
T ss_pred CC--------------------------------CEEEEEC----CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 88--------------------------------4589944----26999972576578889989999999999999999
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC------CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 8854432320236999999999999976311586688------3089999999999999898523124556458899999
Q gi|254781161|r 348 SSALQNADHLTSSWSFYDINKLNNTVPSKGMRSTVRG------QSLKDIAIQILTFAHQGLKNRSAKNHLQEDETIFLKP 421 (457)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~~~~------~~~~~l~~~ll~~A~~GL~~r~~~~~~~~dE~~yL~~ 421 (457)
+....+.......++.+.+++|+|+|+|+||++.+.+ .++.++++++++. | + ++.
T Consensus 265 ~~~~~~~g~~~~~~~~~ll~en~WRAaR~Gldg~lid~~~~~~~p~~elv~~~~~~----L---~------------~~~ 325 (357)
T PRK13518 265 LAARYEDGESGTGLRRELLDANKWRAMRHGHDAEFLARELQETVDLGELVDRECDR----L---G------------VSG 325 (357)
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHH----H---H------------HHH
T ss_conf 99999759999999999999868778732888613679999733699999999989----7---5------------626
Q ss_pred HHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 9999983898589999987102
Q gi|254781161|r 422 LEKIIHNNQTTADEMLAAYHTR 443 (457)
Q Consensus 422 l~~~i~~g~t~A~~~l~~y~~~ 443 (457)
++++++.| |+|++|++.|...
T Consensus 326 ~~~il~~G-tgA~RQRrv~~~~ 346 (357)
T PRK13518 326 IRDVYDRE-SGAEKQRRLLDSE 346 (357)
T ss_pred HHHHHHCC-CHHHHHHHHHHHH
T ss_conf 99999755-7099999999973
No 9
>TIGR02050 gshA_cyan_rel uncharacterized enzyme; InterPro: IPR011793 This family represents a division of a larger family, the other branch of which is predicted to act as glutamate--cysteine ligase (the first of two enzymes in glutathione biosynthesis) in the cyanobacteria. Species containing this protein, however, are generally not believed to make glutathione, and the function is unknown..
Probab=100.00 E-value=0 Score=367.30 Aligned_cols=291 Identities=19% Similarity=0.189 Sum_probs=248.7
Q ss_pred EEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCEEECCC-CCEEEECCHHHHH
Q ss_conf 586777653874765784871122349999997555248864612784102334568870341354-2024201101015
Q gi|254781161|r 32 RIGTEHESFIFSRADHRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIGLANPLSKAGISIEPG-GQLELSTTTLQNV 110 (457)
Q Consensus 32 ~IG~E~E~flvd~~~~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~~~~it~ep~-~qlE~s~~~~~~~ 110 (457)
++|||.|++|||..|..+.+-+ ..+..+.++..+..+ ..+.|..|.-|.. +|+|+++++|.++
T Consensus 1 TlGvEeE~~LVD~~~~d~~~~~--~~~~~~~~~~~~~~~--------------~~PGGy~~~~E~~~~~vE~at~v~~~~ 64 (297)
T TIGR02050 1 TLGVEEELLLVDPHTYDLAASS--DEAAALVGECREKLG--------------EDPGGYEFKKELFESQVELATPVCTTL 64 (297)
T ss_pred CCHHEEEHHHCCCCCCCCCCCC--HHHHHHHHCCCCCCC--------------CCCCCCCCCHHHHHCEEEEECCCCCCH
T ss_conf 9402000212055678876661--048999860774113--------------688863204222214444656844787
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCH
Q ss_conf 67788888878887874210387342105687888454200000135666665432112678887631340475147898
Q gi|254781161|r 111 HQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKKYMPQVGTHGLDMMFRTCTTQVSLDFSSE 190 (457)
Q Consensus 111 ~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m~~~~~~~g~~~~~mm~~tas~Qv~id~~~~ 190 (457)
.|+.+++...+..+..++.++|+++++.|+||+.+|......+++||+.+.+.++..+...+ +||+||||++.++
T Consensus 65 ~eA~~~~~~~r~~l~~~A~~~G~~~~~~gtHPf~~W~~~~~~~~~rY~~~~e~~gy~~~~~L-----v~G~HVHVgv~s~ 139 (297)
T TIGR02050 65 AEALAELREVRARLVEAASDLGLRIAAAGTHPFARWREQELAENPRYQRLLERYGYVARQSL-----VFGLHVHVGVPSP 139 (297)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHCCCCCCCHHHHHHHHHCCEEEHHEE-----ECCEEEEECCCCH
T ss_conf 89999999999999999866486365134677533314777865558999986180000013-----2113477032764
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECC
Q ss_conf 89999999998765678887437865588778743226888520277788656544577541999999985145316305
Q gi|254781161|r 191 HDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSWRSEIWRHTDSDRTEILPFILRDNSNFEHYAQWALDIPMYFILR 270 (457)
Q Consensus 191 ~d~~~~~n~a~~l~P~llAL~aNSPf~~G~~~g~~s~R~~i~~~~d~~r~~~~~~~~~~~~~~e~y~~~~~~~~~i~~~~ 270 (457)
+|.+.++|.+..+.|+++|||||||||.|.+|||.|+|..+|+.++..+. |..|.+|..|++|+..+..+++|....
T Consensus 140 ~~~~~vl~rl~~~lP~LlALSAsSPfw~G~DTgyAS~R~~~~~~~P~~G~---p~~f~~w~ay~~~~a~l~~tG~i~~~g 216 (297)
T TIGR02050 140 DDAVAVLNRLLPWLPHLLALSASSPFWQGRDTGYASYRANIFQEWPTAGL---PPAFQSWDAYEAYVADLRETGVIEDDG 216 (297)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHCCCCCC---CHHHCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 35889986566678999999861511158252377889999984666787---422205899999999998548924788
Q ss_pred CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCC-HHHHHHHHHHHHHHHHHHH
Q ss_conf 875326678887885126432101365546677531123456643335501211578888-6675555888988765388
Q gi|254781161|r 271 KKEYYCCTDITFRQFMNGALKGRIKEWHPTLEDWENHLSTLFPAVRLRNCLEMRGADSGR-LENIFAVAAFWTGILYDSS 349 (457)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~d~~~~~~~~f~~~r~~~~IEiR~~Ds~P-~~~~~a~aAf~~gl~~~~~ 349 (457)
.-|+..| +.+.+||||+|+||+|+ ...+.+.||++.+|+....
T Consensus 217 -------------------------------~l~wDiR-----Ps~~~gTvEvRv~D~~~~l~~~~~~aaL~rALv~~~~ 260 (297)
T TIGR02050 217 -------------------------------DLYWDIR-----PSSHYGTVEVRVADACLNLEEALALAALIRALVEELL 260 (297)
T ss_pred -------------------------------CEEEEEE-----ECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf -------------------------------6688345-----0699882688714899889999999999999999999
Q ss_pred H---HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 5---44323202369999999999999763115866
Q gi|254781161|r 350 A---LQNADHLTSSWSFYDINKLNNTVPSKGMRSTV 382 (457)
Q Consensus 350 ~---~~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~~ 382 (457)
. ...........+.+.++.|+|+|+|||+++++
T Consensus 261 ~rYD~~~~p~~~~~~~~~~~~~N~WrA~RyG~~~~~ 296 (297)
T TIGR02050 261 RRYDEWDAPFPVPEDDRWLLQENKWRAARYGLDAEI 296 (297)
T ss_pred HHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 751512277998764378999987885203642112
No 10
>COG2170 Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=0 Score=329.48 Aligned_cols=350 Identities=18% Similarity=0.230 Sum_probs=271.2
Q ss_pred CCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCEEECCCCCEEEECCHHHH
Q ss_conf 35586777653874765784871122349999997555248864612784102334568870341354202420110101
Q gi|254781161|r 30 EFRIGTEHESFIFSRADHRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIGLANPLSKAGISIEPGGQLELSTTTLQN 109 (457)
Q Consensus 30 ~~~IG~E~E~flvd~~~~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~~~~it~ep~~qlE~s~~~~~~ 109 (457)
.++.|+|+|+|+||+.+..-++ ....+++.+... ...+- ++.+. .-+++|+.++.|..
T Consensus 2 ~ltlGvE~E~~lvd~~g~dl~~-----~s~~ii~~~~~~-~~~~~--------~~~e~--------~e~~vE~~t~vc~~ 59 (369)
T COG2170 2 RLTLGVELEFQLVDPQGYDLVG-----SSDAIIEALKGK-VTAGH--------LKHEI--------TESTVELATGVCRL 59 (369)
T ss_pred CCCCCEEEEEEECCCCCCCCCC-----CCHHHHHHCCCC-CCCCC--------HHHHH--------HHHHHCCCCHHHHH
T ss_conf 9665337999960777766645-----417899853788-88751--------16888--------87743034036665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
Q ss_conf 56778888887888787421038734210568788845420000013566666543211267888763134047514789
Q gi|254781161|r 110 VHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKKYMPQVGTHGLDMMFRTCTTQVSLDFSS 189 (457)
Q Consensus 110 ~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m~~~~~~~g~~~~~mm~~tas~Qv~id~~~ 189 (457)
++++.+.....+..+..++..+++++++.|+||+++|......+++||+...+..+..|. .| -+||+||||++++
T Consensus 60 ~~eA~~~~r~~r~~l~q~a~d~gL~~~~~GtHPfadw~~~~~~~~prY~~~ie~~~y~~~---q~--~v~G~HVHVGi~~ 134 (369)
T COG2170 60 LAEAAAQLRALRDYLVQAASDHGLRICGGGTHPFADWRRQEVPDNPRYQRLIERTGYLGR---QM--TVAGQHVHVGIPS 134 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHH---HE--EEEEEEEEECCCC
T ss_conf 999999999999999997442380332367885025565247887239999998516776---21--5645778836898
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEC
Q ss_conf 88999999999876567888743786558877874322688852027778865654457754199999998514531630
Q gi|254781161|r 190 EHDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSWRSEIWRHTDSDRTEILPFILRDNSNFEHYAQWALDIPMYFIL 269 (457)
Q Consensus 190 ~~d~~~~~n~a~~l~P~llAL~aNSPf~~G~~~g~~s~R~~i~~~~d~~r~~~~~~~~~~~~~~e~y~~~~~~~~~i~~~ 269 (457)
++|++..+|.+....|+++|||||||||.|.+|||.|+|..+++.+++.+. ++.|.+|..|+.|+.....+++|-..
T Consensus 135 ~d~~~~~l~~l~~~~PhlLALSASSPf~~G~dTGyAS~R~~if~~~P~~g~---pp~f~sw~~f~~~~~~~~~tG~I~~~ 211 (369)
T COG2170 135 PDDAMYLLHRLLRYVPHLLALSASSPFWQGTDTGYASARANIFSQLPTNGL---PPAFQSWAAFEAFFRDQLETGTIDSM 211 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCC---CCCCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 899999999887650588765037853167323135655766320776799---96516889999999998873641446
Q ss_pred CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC-CCEEECCCCCCC-HHHHHHHHHHHHHHHHH
Q ss_conf 5875326678887885126432101365546677531123456643335-501211578888-66755558889887653
Q gi|254781161|r 270 RKKEYYCCTDITFRQFMNGALKGRIKEWHPTLEDWENHLSTLFPAVRLR-NCLEMRGADSGR-LENIFAVAAFWTGILYD 347 (457)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~d~~~~~~~~f~~~r~~-~~IEiR~~Ds~P-~~~~~a~aAf~~gl~~~ 347 (457)
.+++|.+. +. +| +|||+|+||+++ +....|.+|+..+++..
T Consensus 212 --------------------------------~~lwwdIR----Ps-ph~gTlEvRi~D~~~~l~~~~aivaL~~Alv~~ 254 (369)
T COG2170 212 --------------------------------GDLWWDIR----PS-PHLGTLEVRICDTVLNLAELLAIVALIHALVVW 254 (369)
T ss_pred --------------------------------CCEEEECC----CC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf --------------------------------63378613----68-877825888447879999999999999999999
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC------CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 8854432320236999999999999976311586688------3089999999999999898523124556458899999
Q gi|254781161|r 348 SSALQNADHLTSSWSFYDINKLNNTVPSKGMRSTVRG------QSLKDIAIQILTFAHQGLKNRSAKNHLQEDETIFLKP 421 (457)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~aar~Gl~a~~~~------~~~~~l~~~ll~~A~~GL~~r~~~~~~~~dE~~yL~~ 421 (457)
+..........+........+|+|+|+|+||+|.+.. ..+.|++.+++.-...--++. +.+.+|++
T Consensus 255 ll~~~d~~p~~p~~l~~~~~eN~wqA~RyGlda~~~~~~dg~~~~~~d~~~~~~~~l~p~A~~l--------g~~~~l~~ 326 (369)
T COG2170 255 LLRRRDADPTEPDYLLYLFDENKWQAARYGLDAVITDPADGRRRALTDWLLRLLQRLAPSAKKL--------GCACALEA 326 (369)
T ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHH--------CCHHHHHH
T ss_conf 9638899989812789987660899987066648962367861237789999999977888762--------51667999
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 9999983898589999987102218889998876
Q gi|254781161|r 422 LEKIIHNNQTTADEMLAAYHTRWGKSIDPCFEEY 455 (457)
Q Consensus 422 l~~~i~~g~t~A~~~l~~y~~~~~~~i~~i~~~~ 455 (457)
+.+++++| +.|+.++..|+..-+.-+..+...+
T Consensus 327 l~~il~~g-~~aqq~~R~~~~~~~~~~~~v~~~~ 359 (369)
T COG2170 327 LRDILREG-SSAQQQLRVFKQHGGSLIAAVDRHC 359 (369)
T ss_pred HHHHHHHC-CHHHHHHHHHHCCCCCHHHHHHHHH
T ss_conf 99999853-0799999999802530899999999
No 11
>TIGR02048 gshA_cyano glutamate--cysteine ligase, putative; InterPro: IPR011792 This family consists of proteins believed to be the glutamate--cysteine ligases of several cyanobacteria, which are known to make glutathione ..
Probab=99.88 E-value=6.7e-21 Score=145.75 Aligned_cols=303 Identities=19% Similarity=0.251 Sum_probs=204.4
Q ss_pred CC-CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCEECCCCCCCCCHH-HHHCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 54-20242011010156778888887888787421038--734210568788845-420000013566666543211267
Q gi|254781161|r 96 PG-GQLELSTTTLQNVHQIKGEILGYIQILKEITQNLD--LGILGMGFNPKWKLD-EMPIMPKSRYVLMKKYMPQVGTHG 171 (457)
Q Consensus 96 p~-~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~--~~~~~~g~~P~~~~~-~~~~~~~~Ry~~m~~~~~~~g~~~ 171 (457)
|. ..+|+.++|...-..+-..+..-+..+...+...| +.++.-.+....... --...|..-|+...+ +.+|+.
T Consensus 36 Pdsrnveytt~P~~~y~~~lC~~l~Pr~~lr~yl~~lG~d~tl~PGs~l~lG~~~~fyrsdP~nPyh~yie--qty~t~- 112 (377)
T TIGR02048 36 PDSRNVEYTTPPLYSYDRLLCDLLRPRRRLRDYLKQLGEDYTLIPGSTLSLGDTDRFYRSDPQNPYHTYIE--QTYGTK- 112 (377)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH--HHCCCE-
T ss_conf 77653223363478999999998634899999999726550314753000377653101588862468876--420544-
Q ss_pred HHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 88876313404751478988999999999876567888743786558877874322688852027778865654457754
Q gi|254781161|r 172 LDMMFRTCTTQVSLDFSSEHDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSWRSEIWRHTDSDRTEILPFILRDNS 251 (457)
Q Consensus 172 ~~mm~~tas~Qv~id~~~~~d~~~~~n~a~~l~P~llAL~aNSPf~~G~~~g~~s~R~~i~~~~d~~r~~~~~~~~~~~~ 251 (457)
.-|||+|+++++.+.+.+++.+++.+.-+|+++||+|+|||++|+.|||+|.|..++-.++.. -+.|.+..
T Consensus 113 ----vvtas~hin~G~~~~e~l~raCrl~r~eaPl~lalsa~sPf~~G~~tGyhs~rW~~fP~tP~~-----vPlftsh~ 183 (377)
T TIGR02048 113 ----VVTASVHINIGIDDPEALMRACRLVRLEAPLFLALSASSPFLDGQVTGYHSTRWAVFPKTPTE-----VPLFTSHA 183 (377)
T ss_pred ----EEEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCC-----CCCCCCHH
T ss_conf ----888888886066427889866333301113677765216322661000111001104788875-----74110205
Q ss_pred CHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC--CCEEECCCCC-
Q ss_conf 1999999985145316305875326678887885126432101365546677531123456643335--5012115788-
Q gi|254781161|r 252 NFEHYAQWALDIPMYFILRKKEYYCCTDITFRQFMNGALKGRIKEWHPTLEDWENHLSTLFPAVRLR--NCLEMRGADS- 328 (457)
Q Consensus 252 ~~e~y~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~d~~~~~~~~f~~~r~~--~~IEiR~~Ds- 328 (457)
.|-.|++.-+..+.+--. ..++...+|++ +.|++ +++|+|+||-
T Consensus 184 h~~~W~e~ql~~Gtmqnv---------------------rhlW~~vrPnG------------d~rP~~lnrlelriCdlv 230 (377)
T TIGR02048 184 HFIEWTEEQLALGTMQNV---------------------RHLWSAVRPNG------------DRRPYDLNRLELRICDLV 230 (377)
T ss_pred HHHHHHHHHHHHHHHHHH---------------------HHHHHHCCCCC------------CCCCCCHHHHHHHHHHHH
T ss_conf 788888988731137666---------------------76664106676------------778630114555565564
Q ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHH----HHHHHHHHHHHHCCCC-CCCC-----HHHHHHHHHH
Q ss_conf -886675555888988765388544323202-36999999----9999999763115866-8830-----8999999999
Q gi|254781161|r 329 -GRLENIFAVAAFWTGILYDSSALQNADHLT-SSWSFYDI----NKLNNTVPSKGMRSTV-RGQS-----LKDIAIQILT 396 (457)
Q Consensus 329 -~P~~~~~a~aAf~~gl~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~aar~Gl~a~~-~~~~-----~~~l~~~ll~ 396 (457)
-|+... |..|+.-+-+..+-.......+. ..++.+.+ .+|-..|+...|++.+ .|++ .++|+.++..
T Consensus 231 t~P~~ll-ai~allearl~ql~~~P~ldPl~~~~~~~~~l~~l~~~ne~~aa~~sl~~~l~hW~d~r~~~a~~W~~e~y~ 309 (377)
T TIGR02048 231 TDPISLL-AITALLEARLLQLLEDPDLDPLRQSKLSPEELVALADKNEAAAAKASLDAVLTHWRDGRAIIAREWIEELYQ 309 (377)
T ss_pred CCHHHHH-HHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 0448999-999999999999971888672111046889999998867789998878777765443567899999999999
Q ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHH
Q ss_conf 99998985231245564588999999999983898589999987102218889998876
Q gi|254781161|r 397 FAHQGLKNRSAKNHLQEDETIFLKPLEKIIHNNQTTADEMLAAYHTRWGKSIDPCFEEY 455 (457)
Q Consensus 397 ~A~~GL~~r~~~~~~~~dE~~yL~~l~~~i~~g~t~A~~~l~~y~~~~~~~i~~i~~~~ 455 (457)
-...--+..|. .-||.||++++++| +-|+.++..|+.. +++..|..+.
T Consensus 310 ~v~~~ak~~Gf--------~Cfl~P~~kilr~G-n~aq~Wl~~~~~G--~~~~~~~~~a 357 (377)
T TIGR02048 310 EVWAIAKKQGF--------SCFLSPLKKILREG-NEAQQWLAQYKAG--KTIQEIVAQA 357 (377)
T ss_pred HHHHHHHHCCC--------EEEHHHHHHHHHCC-HHHHHHHHHHHCC--CCHHHHHHHH
T ss_conf 99999875485--------34145799987343-4689999998606--8578999999
No 12
>PRK02107 glutamate--cysteine ligase; Provisional
Probab=99.46 E-value=2.5e-10 Score=81.49 Aligned_cols=389 Identities=13% Similarity=0.068 Sum_probs=191.1
Q ss_pred HHCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCC-CCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCC
Q ss_conf 2148999999998379872035586777653874765-784871122349999997555248864612784102334568
Q gi|254781161|r 10 IVTSIDDLVQHIASGIKPQEEFRIGTEHESFIFSRAD-HRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIGLANPLS 88 (457)
Q Consensus 10 ~~~~~~~l~~~f~~g~k~~~~~~IG~E~E~flvd~~~-~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~ 88 (457)
|+.+..+-..|+++.-.-=...+-|+|-|..=|+.++ .+..|. ...+|. .+.
T Consensus 1 ~~~~~~~~~~~l~~~~~~L~~~~rGiEkE~lRv~~~G~ls~~~H-------------P~~lGs--------------~lt 53 (523)
T PRK02107 1 MIPDLSQRLAWLEAHPQALKGILRGIERETLRVTADGTLATTPH-------------PEALGS--------------ALT 53 (523)
T ss_pred CCHHHHHHHHHHHHCHHHHHCCCCCCEEECCEECCCCCCCCCCC-------------CHHHCC--------------CCC
T ss_conf 94408999999985999883575441300102788978679999-------------643278--------------753
Q ss_pred CCCEEECCC-CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHH-----H-H
Q ss_conf 870341354-20242011010156778888887888787421038734210568788845420000013566-----6-6
Q gi|254781161|r 89 KAGISIEPG-GQLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVL-----M-K 161 (457)
Q Consensus 89 ~~~it~ep~-~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~-----m-~ 161 (457)
...||.+-. +|+|+.++|..++.++...+......+..-+ +-..+....||..-..+ .-+|...|.- | .
T Consensus 54 hp~ITTDfSEsllE~iTp~~~~~~~~l~~L~~lh~~v~~~l---~~E~lWp~SMP~~l~~~-~~IpiA~yg~sn~g~~k~ 129 (523)
T PRK02107 54 HKWITTDYSEALLEFITPVDGDIAHTLTFLRDIHRYTYRKL---GDERLWPLSMPCYLPAE-QDIPIAQYGTSNIGRLKT 129 (523)
T ss_pred CCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC---CCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCHH
T ss_conf 88868646557644078999999999999999999999527---87534787889989985-767632179987654079
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCH--------------HH-----HHHHHHHHHHHHHHHHHHHCCCC-----CC
Q ss_conf 65432112678887631340475147898--------------89-----99999999876567888743786-----55
Q gi|254781161|r 162 KYMPQVGTHGLDMMFRTCTTQVSLDFSSE--------------HD-----MATKLRVSFKLQPLATAIFASSP-----FA 217 (457)
Q Consensus 162 ~~~~~~g~~~~~mm~~tas~Qv~id~~~~--------------~d-----~~~~~n~a~~l~P~llAL~aNSP-----f~ 217 (457)
.|=...+.+.=.+|..+||+|+|+-++++ .+ .-...+-..++.++++.||-.|| |+
T Consensus 130 ~YR~gL~~RYG~~mQ~isGiHyNfS~~~~~~~~l~~~~~~~~~~~f~~~~Y~~liRNf~R~~WLl~YLfGASP~~~~sf~ 209 (523)
T PRK02107 130 VYREGLANRYGALMQCIAGVHYNFSLPEAFWQALCGEGSEASAKDYISAGYFALIRNFYRFGWLLMYLFGASPALCSSFL 209 (523)
T ss_pred HHHHHHHHHHCHHHHCCCEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHC
T ss_conf 99999998847044311136760367899999998613751188887799999999999988999998057720234432
Q ss_pred CCCCCCCCCHHH--HHHHCCCCCCCCC---C----CCCCCCCCCHHHHHHHHHHCCCE--------EECCCCCCCCCCCC
Q ss_conf 887787432268--8852027778865---6----54457754199999998514531--------63058753266788
Q gi|254781161|r 218 EGRINGFQSWRS--EIWRHTDSDRTEI---L----PFILRDNSNFEHYAQWALDIPMY--------FILRKKEYYCCTDI 280 (457)
Q Consensus 218 ~G~~~g~~s~R~--~i~~~~d~~r~~~---~----~~~~~~~~~~e~y~~~~~~~~~i--------~~~~~~~~~~~~~~ 280 (457)
.|+.......-. .....--.-|.+. . ....-+..+.+.|++-+...-.- =...++.+.
T Consensus 210 ~~~~~~l~~~~~~t~y~p~ATSLRmS~lGY~n~~q~~l~i~ynsl~~Yi~~l~~ai~~~~~~y~~iG~~~~g~~~----- 284 (523)
T PRK02107 210 RGRPTSLEKFDAGTLYLPYATSLRMSDLGYTNKAQSNLGITFNDLDEYVDGLKKAIKTPSPEYAAIGTKRDGEWI----- 284 (523)
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHH-----
T ss_conf 456553101688760268863544367776788876410015019999999999985997778981877788624-----
Q ss_pred CHHHHHCCC--CCCC-CCCCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCCHH---HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 878851264--3210-136554667753112345664333550121157888866---7555588898876538854432
Q gi|254781161|r 281 TFRQFMNGA--LKGR-IKEWHPTLEDWENHLSTLFPAVRLRNCLEMRGADSGRLE---NIFAVAAFWTGILYDSSALQNA 354 (457)
Q Consensus 281 ~~~~~~~~~--~~~~-~~~~~~t~~d~~~~~~~~f~~~r~~~~IEiR~~Ds~P~~---~~~a~aAf~~gl~~~~~~~~~~ 354 (457)
++-.+- ++.+ +...+|-..--.-.++...-..+.--|||+|.+|--|.. -...-+-|.-.++ +..+-..
T Consensus 285 ---QLN~~iLQiEnE~Ys~iRpKr~~~~ge~p~~aL~~~GVeYiEvR~lDlnPf~~~GI~~~~~~Fl~~fl--lyCLL~~ 359 (523)
T PRK02107 285 ---QLNTNVLQIENELYAPIRPKRVTRSGERPSDALARRGVEYIEVRCLDINPFSPIGVDEEQARFLDLFL--LWCALAD 359 (523)
T ss_pred ---HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHH--HHHHCCC
T ss_conf ---41011554420221565766778887009999985696479885313787666787889999999999--9997388
Q ss_pred HHCCCCCCHHHHHHHHHHHHHHHHCCCCC----C----CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH---HHHH
Q ss_conf 32023699999999999997631158668----8----30899999999999998985231245564588999---9999
Q gi|254781161|r 355 DHLTSSWSFYDINKLNNTVPSKGMRSTVR----G----QSLKDIAIQILTFAHQGLKNRSAKNHLQEDETIFL---KPLE 423 (457)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~aar~Gl~a~~~----~----~~~~~l~~~ll~~A~~GL~~r~~~~~~~~dE~~yL---~~l~ 423 (457)
...+..-......+|..+++..|.+-.+. + .++.+|+.+++.--..-....+.. .+ ...|- ....
T Consensus 360 Sp~~~~~E~~~i~~N~~~Vv~~GR~p~L~L~~~g~~~~~~l~~wa~~ll~~l~~iA~~LD~~--~g--~~~Y~~Al~~~~ 435 (523)
T PRK02107 360 SPEMSSDELACTRDNWNRVILEGRKPGLTLGRGCQPVQLPLPAWAKELFADLRRVAELLDSI--NG--GDAYQKACDALR 435 (523)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CC--CCHHHHHHHHHH
T ss_conf 87689999999998999999855798854045899660169999999999999999997222--38--629999999999
Q ss_pred HHHH-CCCCCHHHHHHHHHHH
Q ss_conf 9998-3898589999987102
Q gi|254781161|r 424 KIIH-NNQTTADEMLAAYHTR 443 (457)
Q Consensus 424 ~~i~-~g~t~A~~~l~~y~~~ 443 (457)
++++ ...||+.++++.-.+.
T Consensus 436 ~ki~dp~lTPSariL~em~~~ 456 (523)
T PRK02107 436 AKFDDPELTPSARVLRSMREN 456 (523)
T ss_pred HHHCCCCCCHHHHHHHHHHHC
T ss_conf 984498889489999999873
No 13
>PRK02471 bifunctional glutamate--cysteine ligase/glutathione synthetase; Provisional
Probab=99.29 E-value=7e-09 Score=72.67 Aligned_cols=360 Identities=16% Similarity=0.143 Sum_probs=173.8
Q ss_pred HHHHHHHHHCCCCCCCCEEEEEEEEEEEECCC-CCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCEE
Q ss_conf 99999998379872035586777653874765-78487112234999999755524886461278410233456887034
Q gi|254781161|r 15 DDLVQHIASGIKPQEEFRIGTEHESFIFSRAD-HRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIGLANPLSKAGIS 93 (457)
Q Consensus 15 ~~l~~~f~~g~k~~~~~~IG~E~E~flvd~~~-~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~~~~it 93 (457)
..|...|-.| ++|+|-|..=|+.++ ++..|. ...+|. .....-||
T Consensus 10 ~~l~~~l~~g-------~fGiErE~lRV~~~G~Ls~tpH-------------P~~lGs--------------~lthpyIt 55 (753)
T PRK02471 10 LHLGPLLLQA-------NFGLEKESLRVDADGQLATTPH-------------PKAFGS--------------RSFHPYIQ 55 (753)
T ss_pred CCCHHHHHHC-------CCCEEEEEEEECCCCCCCCCCC-------------CHHHCC--------------CCCCCCCC
T ss_conf 5417788607-------8552633123789978579999-------------566478--------------64388878
Q ss_pred ECCC-CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHHHH--HHHHHH
Q ss_conf 1354-2024201101015677888888788878742103873421056878884542000001356666654--321126
Q gi|254781161|r 94 IEPG-GQLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKKYM--PQVGTH 170 (457)
Q Consensus 94 ~ep~-~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m~~~~--~~~g~~ 170 (457)
.+-. +|+|+.++|+.++.++...+......+..-++. -..+....||..-..+ .-+|...|..-.... ...+.+
T Consensus 56 TDFSEsqlElITP~~~s~~~~l~~L~~Lh~~v~~~L~~--dE~LWPlSMPp~l~~e-~~IpiA~yg~~~~~~YR~gL~~r 132 (753)
T PRK02471 56 TDFSESQLELITPVADSIEEVYRFLGALHDVASRSIDE--DEYLWPLSMPPILPDE-EEIPIAQLDNREDRLYREYLAKK 132 (753)
T ss_pred CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC--CCEECCCCCCCCCCCC-CCCCEEECCCHHHHHHHHHHHHH
T ss_conf 76677876506889899999999999999999973799--8616788889999886-86620117975588999888877
Q ss_pred HHHHHHHHCCCEEEECCCCHHHHHH----------------------HHHHHHHHHHHHHHHHCCCCCCCCCC-----C-
Q ss_conf 7888763134047514789889999----------------------99999876567888743786558877-----8-
Q gi|254781161|r 171 GLDMMFRTCTTQVSLDFSSEHDMAT----------------------KLRVSFKLQPLATAIFASSPFAEGRI-----N- 222 (457)
Q Consensus 171 ~~~mm~~tas~Qv~id~~~~~d~~~----------------------~~n~a~~l~P~llAL~aNSPf~~G~~-----~- 222 (457)
.=..|..+||+|+|+.++++ +.+ ..+-..++.+++..||..||..+... .
T Consensus 133 YG~~mQ~isGIHyNfSl~~~--l~~~l~~~~~~~~~~~~Fkn~~Yl~l~RNf~Ry~WLl~YLfGASP~~~~sf~~~~~~~ 210 (753)
T PRK02471 133 YGKKKQMISGIHYNFSLGEA--LITRLYEEQSEQQDYIDFKNALYLKVARNFLRYRWLLTYLFGASPVAEASFFKEESPL 210 (753)
T ss_pred HCCHHHCEEEEEEECCCCHH--HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC
T ss_conf 38314113348983078999--9999997525752288887799999999999998999998058801123441277665
Q ss_pred ----CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC---CCEEECCCCCCCCCCCCCHHHHHCCCCCCCCC
Q ss_conf ----74322688852027778865654457754199999998514---53163058753266788878851264321013
Q gi|254781161|r 223 ----GFQSWRSEIWRHTDSDRTEILPFILRDNSNFEHYAQWALDI---PMYFILRKKEYYCCTDITFRQFMNGALKGRIK 295 (457)
Q Consensus 223 ----g~~s~R~~i~~~~d~~r~~~~~~~~~~~~~~e~y~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (457)
...|.|.--... .......-+..+.+.|++.+... ..+.... ..+. ++ +..+
T Consensus 211 ~~~~~~~SLR~S~~GY------~N~~~l~i~YnsL~~Yv~~l~~av~~g~Lq~en--EfYs--~V--------RlKg--- 269 (753)
T PRK02471 211 LGSDAVRSLRNSKYGY------VNKEDVYVSYNSLEDYVESLENAVESGQLISEK--EFYS--PV--------RLRG--- 269 (753)
T ss_pred CCCCCEEEEECCCCCC------CCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECC--CCCC--CC--------CCCC---
T ss_conf 6778524503367787------774125337024999999999999738632003--3556--73--------7689---
Q ss_pred CCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCCHH---HHHHHHHHHHHHH-HHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 6554667753112345664333550121157888866---7555588898876-53885443232023699999999999
Q gi|254781161|r 296 EWHPTLEDWENHLSTLFPAVRLRNCLEMRGADSGRLE---NIFAVAAFWTGIL-YDSSALQNADHLTSSWSFYDINKLNN 371 (457)
Q Consensus 296 ~~~~t~~d~~~~~~~~f~~~r~~~~IEiR~~Ds~P~~---~~~a~aAf~~gl~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (457)
..+ ..++ ..+.-.|||+|++|--|+. -...-.-|...++ |.+.. ++. +....+ .+...++..
T Consensus 270 -~~~-~~~L---------~~~GIeYiE~R~lDlNPf~~~GIs~~~l~FL~lflly~Ll~-de~-~~~~~~-~~~a~~~~~ 335 (753)
T PRK02471 270 -AKQ-VRSL---------LEKGITYLEFRLFDLNPFEPYGISQETLDFVHLFLLYLLWL-DEP-EDVDQW-VEEGDENNN 335 (753)
T ss_pred -CCH-HHHH---------HHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CCC-CHHHHH-HHHHHHHHH
T ss_conf -882-7888---------85698399984003798976797989999999999998646-784-006999-999999889
Q ss_pred HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH-HHHHHHHHHHHH-CCCCCHHHHHHHHHHH----HC
Q ss_conf 99763115866883089999999999999898523124556458-899999999998-3898589999987102----21
Q gi|254781161|r 372 TVPSKGMRSTVRGQSLKDIAIQILTFAHQGLKNRSAKNHLQEDE-TIFLKPLEKIIH-NNQTTADEMLAAYHTR----WG 445 (457)
Q Consensus 372 ~aar~Gl~a~~~~~~~~~l~~~ll~~A~~GL~~r~~~~~~~~dE-~~yL~~l~~~i~-~g~t~A~~~l~~y~~~----~~ 445 (457)
.+|- .......+..+.+..+|.--++=+...+.. .| ...++.+.+++. -..|+|.++++.-+.. |.
T Consensus 336 ~VAl---e~p~~~~~~~~~a~~il~~l~~~~~~l~l~-----~~y~~~~~~~~~~v~~P~~T~s~rl~~~i~~~s~~~~~ 407 (753)
T PRK02471 336 LIAL---EHPLEATALAAEGELILDAMEDFVQHLGLP-----DEFQDLIEQLKEQVTDPKKTLSGRLLKQIKQESYVAFG 407 (753)
T ss_pred HHHH---HCCCCCCCHHHHHHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHH
T ss_conf 9985---199976615789999999999999971998-----89999999999987391139899999999860589999
Q ss_pred CCHHHHHHHHC
Q ss_conf 88899988767
Q gi|254781161|r 446 KSIDPCFEEYA 456 (457)
Q Consensus 446 ~~i~~i~~~~~ 456 (457)
..+.+-|-+.|
T Consensus 408 l~lA~~Y~~~a 418 (753)
T PRK02471 408 LEQAKQYKEYA 418 (753)
T ss_pred HHHHHHHHHHH
T ss_conf 99999999999
No 14
>COG2918 GshA Gamma-glutamylcysteine synthetase [Coenzyme metabolism]
Probab=99.17 E-value=1.5e-07 Score=64.55 Aligned_cols=374 Identities=15% Similarity=0.123 Sum_probs=181.1
Q ss_pred CCCCCCHHHCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEEC
Q ss_conf 77433112148999999998379872035586777653874765784871122349999997555248864612784102
Q gi|254781161|r 3 CNPLANTIVTSIDDLVQHIASGIKPQEEFRIGTEHESFIFSRADHRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIG 82 (457)
Q Consensus 3 ~~~~~~~~~~~~~~l~~~f~~g~k~~~~~~IG~E~E~flvd~~~~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~~~ 82 (457)
|.+.-.++|.-.+++-.+|.+| .-|+|-|-.=|+.++.-+.+.- ..+|+.
T Consensus 1 Mi~~~~~~l~~~e~~~~~l~~~-------~~GlEREslRVt~dG~la~TpH-----P~~~G~------------------ 50 (518)
T COG2918 1 MIPDISHMLAWLEALPKLLKGG-------SRGLERESLRVTADGALALTPH-----PAALGS------------------ 50 (518)
T ss_pred CCHHHHHHHHHHHHHHHHHHHC-------CCCCCHHCEEECCCCCCCCCCC-----HHHHCC------------------
T ss_conf 9441899999998678998631-------2332110046468886337898-----465265------------------
Q ss_pred CCCCCCCCCEEECCC-CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHH---
Q ss_conf 334568870341354-2024201101015677888888788878742103873421056878884542000001356---
Q gi|254781161|r 83 LANPLSKAGISIEPG-GQLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYV--- 158 (457)
Q Consensus 83 l~~~~~~~~it~ep~-~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~--- 158 (457)
.....-||.+-. +|||+.+++..++.++-..+..--..+..-++. ..+..-.||..-+. ..-+|..+|.
T Consensus 51 ---~lthp~ItTDFsEslLEfITP~~~~id~~l~~L~diH~~~~~kl~~---E~lWPlSmP~~lp~-EedI~iAqyg~s~ 123 (518)
T COG2918 51 ---ALTHPWITTDFAESLLEFITPVTKDIEDTLTFLRDIHRFVARKLGD---ERLWPLSMPCYLPA-EEDIPIAQYGTSN 123 (518)
T ss_pred ---CCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC---CEECCCCCCCCCCC-CCCCCEEECCCCC
T ss_conf ---3248742030357666400888766999999999999999851787---40167778888875-1476004248888
Q ss_pred -HHHH------HHHHHHHHHHHHHHHHCCCEEEECCCC---------------HHH-----HHHHHHHHHHHHHHHHHHH
Q ss_conf -6666------543211267888763134047514789---------------889-----9999999987656788874
Q gi|254781161|r 159 -LMKK------YMPQVGTHGLDMMFRTCTTQVSLDFSS---------------EHD-----MATKLRVSFKLQPLATAIF 211 (457)
Q Consensus 159 -~m~~------~~~~~g~~~~~mm~~tas~Qv~id~~~---------------~~d-----~~~~~n~a~~l~P~llAL~ 211 (457)
...+ ....+| ..|..++|+|-|+.++. ..| ..++.+-..+...++..||
T Consensus 124 ~gr~K~~YRegL~~rYG----k~mQ~ISGIHYNFSlp~~~w~~l~~~~~~e~s~~d~~s~~Y~~liRNf~R~~Wil~YLf 199 (518)
T COG2918 124 TGRFKTLYREGLKNRYG----KLMQTISGIHYNFSLPEAFWDALYGEQNEEKSARDFISAGYFKLIRNFYRFGWILPYLF 199 (518)
T ss_pred CCHHHHHHHHHHHHHHH----HHHHHHHCEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 75378899999998762----66766511132564899999999875251033677887789999999987527999984
Q ss_pred CCCC-----CCCCCCCC-C-------------CCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH---HHCCC----
Q ss_conf 3786-----55887787-4-------------322688852027778865654457754199999998---51453----
Q gi|254781161|r 212 ASSP-----FAEGRING-F-------------QSWRSEIWRHTDSDRTEILPFILRDNSNFEHYAQWA---LDIPM---- 265 (457)
Q Consensus 212 aNSP-----f~~G~~~g-~-------------~s~R~~i~~~~d~~r~~~~~~~~~~~~~~e~y~~~~---~~~~~---- 265 (457)
..|| |+.|+.+- + -|.|.--...++.. .....-...+++.|++.+ ..+|.
T Consensus 200 GASPai~ssflk~~~~~~~e~~~~~~~ylpyatSLR~Sd~GY~N~~----q~~l~i~fNsl~~Yi~sl~~ai~Tps~~y~ 275 (518)
T COG2918 200 GASPAICSSFLKGRPTKPFEKNDEGMLYLPYATSLRLSDLGYTNKS----QSNLNITFNSLEEYVESLKQAIKTPSEEYA 275 (518)
T ss_pred CCCHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHEEECCCCCCCCC----CCCCCCCHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 4981888898658998613323544201420220010214767787----420243120499999999999857854544
Q ss_pred -EEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHCCCC----C-------CCCCCCCCCEEECCCCCCCHH-
Q ss_conf -163058753266788878851264321013655466775311234----5-------664333550121157888866-
Q gi|254781161|r 266 -YFILRKKEYYCCTDITFRQFMNGALKGRIKEWHPTLEDWENHLST----L-------FPAVRLRNCLEMRGADSGRLE- 332 (457)
Q Consensus 266 -i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~d~~~~~~~----~-------f~~~r~~~~IEiR~~Ds~P~~- 332 (457)
+=+..++....... ...-.-+.+...+.. . .--.|.--|||+|++|--|++
T Consensus 276 k~G~k~dg~~~QlN~----------------N~LqiEnE~YapIRpKr~t~~ge~~~~aL~~~GiEYiEvRslDiNPF~p 339 (518)
T COG2918 276 KIGIKKDGERLQLNS----------------NVLQIENELYAPIRPKRVTAKGESPSDALLRRGIEYIEVRSLDINPFSP 339 (518)
T ss_pred HCCCCCCCCEEECCH----------------HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCCCC
T ss_conf 305145652111230----------------4888768765464635555567776899986596189997633688875
Q ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC--CCC----C--CCCHHHHHHHHHHHHHHHH
Q ss_conf --75555888988765388544323202369999999999999763115--866----8--8308999999999999989
Q gi|254781161|r 333 --NIFAVAAFWTGILYDSSALQNADHLTSSWSFYDINKLNNTVPSKGMR--STV----R--GQSLKDIAIQILTFAHQGL 402 (457)
Q Consensus 333 --~~~a~aAf~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aar~Gl~--a~~----~--~~~~~~l~~~ll~~A~~GL 402 (457)
-...-+-|....+. -..+.+.. ....-..+..+.|+.+++-.|-. -.+ . -.++.++++.+++.-+..-
T Consensus 340 iGIs~~q~~FLdlFli-~c~l~ds~-~~~~~e~~~~~~N~~~v~leGr~p~~~l~i~~~~e~~~L~~~g~~~fe~l~~va 417 (518)
T COG2918 340 IGISEDQARFLDLFLV-WCALSDSP-EMDESELELTRDNWNRVALEGRKPGLTLGIGCDNEQLPLQEVGKELFEDLRIVA 417 (518)
T ss_pred CCCCHHHHHHHHHHHH-HHHHCCCC-CCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 7778899899999999-99970781-226578887664499998628987861010568770229999999999999999
Q ss_pred HHCCCCCCCCCCHHHHHHHHHHHHH----CCCCCHHHHHHHHHHH
Q ss_conf 8523124556458899999999998----3898589999987102
Q gi|254781161|r 403 KNRSAKNHLQEDETIFLKPLEKIIH----NNQTTADEMLAAYHTR 443 (457)
Q Consensus 403 ~~r~~~~~~~~dE~~yL~~l~~~i~----~g~t~A~~~l~~y~~~ 443 (457)
+..+.. .+.++|-..+++... --.|++.+.++.+...
T Consensus 418 ~~Ld~~----~~~~~yqa~~~~~~~~~~npElt~sAqil~~m~~~ 458 (518)
T COG2918 418 QTLDSN----NGGEAYQAVCEELVAKLANPELTFSAQILRQMKDT 458 (518)
T ss_pred HHHCCC----CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
T ss_conf 985445----67688999999999875083217789999999872
No 15
>pfam03074 GCS Glutamate-cysteine ligase. This family represents the catalytic subunit of glutamate-cysteine ligase (E.C. 6.3.2.2), also known as gamma-glutamylcysteine synthetase (GCS). This enzyme catalyses the rate limiting step in the biosynthesis of glutathione. The eukaryotic enzyme is a dimer of a heavy chain and a light chain with all the catalytic activity exhibited by the heavy chain (this family).
Probab=99.16 E-value=6.4e-10 Score=78.97 Aligned_cols=260 Identities=13% Similarity=0.124 Sum_probs=136.7
Q ss_pred HHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCC---CCCCCC----CC
Q ss_conf 63134047514789889999999998765678887437865588778743226888520277788---656544----57
Q gi|254781161|r 176 FRTCTTQVSLDFSSEHDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSWRSEIWRHTDSDRT---EILPFI----LR 248 (457)
Q Consensus 176 ~~tas~Qv~id~~~~~d~~~~~n~a~~l~P~llAL~aNSPf~~G~~~g~~s~R~~i~~~~d~~r~---~~~~~~----~~ 248 (457)
++.|++||.++..+.+++-..|-.+..+.|+++||+|.||++.|..+..-++=..+=+.+|.... |..|.. .-
T Consensus 10 MG~cCLQvTfQa~ni~eAR~LYDqL~~l~Pi~LALtAAtP~~kG~L~d~D~RW~vIs~sVDdRt~eErg~~Pl~~~~~~I 89 (365)
T pfam03074 10 MGCCCLQVTFQAPNIDEARYLYDQLAPICPIFLALSAATPFFRGYLADQDVRWLVISASVDDRTREERGLVPLKNNKFHI 89 (365)
T ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEECCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCC
T ss_conf 42233545211277789998887564378999999741786626640665348988755316987774887876676515
Q ss_pred CCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCC---------------------CCCCCCHHHHHHC
Q ss_conf 7541999999985145316305875326678887885126432101---------------------3655466775311
Q gi|254781161|r 249 DNSNFEHYAQWALDIPMYFILRKKEYYCCTDITFRQFMNGALKGRI---------------------KEWHPTLEDWENH 307 (457)
Q Consensus 249 ~~~~~e~y~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~t~~d~~~~ 307 (457)
+..-|..---|+-..+.....-+.............+++++++... .+...+..-|+..
T Consensus 90 pKSRY~si~~Yis~~~~~~~~yND~~~~~d~~i~~~L~~~GiD~~LA~H~AhLfiRDPlvif~e~i~~dd~~~tdHFEni 169 (365)
T pfam03074 90 IKSRYDSIDVYISKCKPNLEEYNDIDLPINEKIYEQLLDEGIDERLAKHIAHLFIRDPLVIFEEMIDQDDATSSEHFENI 169 (365)
T ss_pred CCCCCCCCCEECCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHH
T ss_conf 67766650203158853437627987666899999999759958999999898310763220223025787540355544
Q ss_pred CCCCCCCCCCC---------CCEEECCCCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 23456643335---------50121157888866-755558889887653885443232023699999999999997631
Q gi|254781161|r 308 LSTLFPAVRLR---------NCLEMRGADSGRLE-NIFAVAAFWTGILYDSSALQNADHLTSSWSFYDINKLNNTVPSKG 377 (457)
Q Consensus 308 ~~~~f~~~r~~---------~~IEiR~~Ds~P~~-~~~a~aAf~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~aar~G 377 (457)
-||-++-+|.| =|+|+|+++.|..+ +.+|.+.|+..|....- .-.+.. -++-..+.+|..+|.+..
T Consensus 170 QSTNWqtvRFKPPp~~s~iGWRVEFRpmEiQlTDFENAA~~~fi~LLtr~Il--~~~lnf--yiPiS~VdeNM~~A~~rd 245 (365)
T pfam03074 170 QSTNWQTMRFKPPPPDSDIGWRVEFRPMEVQLTDFENAAYSVFVVLLTRAIL--SFNLNF--YIPISKVDENMKRAHNRD 245 (365)
T ss_pred HCCCCCCEEECCCCCCCCCCCEEEEECCCEECCCHHHHHHHHHHHHHHHHHH--HCCCCE--EEEHHHHHHHHHHHHHHC
T ss_conf 2056640100699987898844564125221561446799999999999998--368746--853205777899998645
Q ss_pred H--CCCCC------------------CCCHHHHHH-------HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC-
Q ss_conf 1--58668------------------830899999-------9999999989852312455645889999999999838-
Q gi|254781161|r 378 M--RSTVR------------------GQSLKDIAI-------QILTFAHQGLKNRSAKNHLQEDETIFLKPLEKIIHNN- 429 (457)
Q Consensus 378 l--~a~~~------------------~~~~~~l~~-------~ll~~A~~GL~~r~~~~~~~~dE~~yL~~l~~~i~~g- 429 (457)
- ..++. .-++.+++. -|+++.+.=|...............||+.+..|+.-.
T Consensus 246 Av~~~kF~fRk~~~~~~~~~~~~~~~~~ti~EI~nGk~~~FpGLi~lv~~yl~~~~~~~~~~~~i~~YL~li~~RasG~l 325 (365)
T pfam03074 246 AVLQQKFYFRKDIFAGKCTTSTDEEAEMSIDEIINGKEGGFPGLIPLVRSYLESENVDVDTRCSIEGYLKFISKRASGEL 325 (365)
T ss_pred HHHHCEEEEECCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 36526137745777677889710431463999967999988512999999986238977889999999999998706878
Q ss_pred CCCHHHHHHH
Q ss_conf 9858999998
Q gi|254781161|r 430 QTTADEMLAA 439 (457)
Q Consensus 430 ~t~A~~~l~~ 439 (457)
.|.|.|+++-
T Consensus 326 ~T~A~wiR~f 335 (365)
T pfam03074 326 PTAARWMRNF 335 (365)
T ss_pred CCHHHHHHHH
T ss_conf 8678999999
No 16
>pfam04262 Glu_cys_ligase Glutamate-cysteine ligase. Family of bacterial f glutamate-cysteine ligases (EC:6.3.2.2) that carry out the first step of the glutathione biosynthesis pathway.
Probab=98.75 E-value=8.8e-07 Score=59.89 Aligned_cols=155 Identities=15% Similarity=0.126 Sum_probs=99.0
Q ss_pred EEEEEEEEEEEECCC-CCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCEEECCC-CCEEEECCHHHH
Q ss_conf 586777653874765-784871122349999997555248864612784102334568870341354-202420110101
Q gi|254781161|r 32 RIGTEHESFIFSRAD-HRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIGLANPLSKAGISIEPG-GQLELSTTTLQN 109 (457)
Q Consensus 32 ~IG~E~E~flvd~~~-~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~~~~it~ep~-~qlE~s~~~~~~ 109 (457)
+.|+|-|..=|+.++ ++..|. ...+|. .+...-||.+-. +|+|+.++|+.+
T Consensus 20 ~~GiEkE~lRV~~~G~Ls~t~H-------------P~~lGs--------------~lthp~ITTDFSEsqlE~ITP~~~s 72 (377)
T pfam04262 20 SRGLERESLRVTADGALALTPH-------------PAALGS--------------ALTHPWITTDFAESLLEFITPPSKD 72 (377)
T ss_pred CCCEEEEEEEECCCCCCCCCCC-------------CHHHCC--------------CCCCCCCCCCCCHHHHHHCCCCCCC
T ss_conf 7552622013789988569999-------------755578--------------5428797875578876617899899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHH------HHHHHHHHHHHHHHHHHHCCCEE
Q ss_conf 567788888878887874210387342105687888454200000135666------66543211267888763134047
Q gi|254781161|r 110 VHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLM------KKYMPQVGTHGLDMMFRTCTTQV 183 (457)
Q Consensus 110 ~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m------~~~~~~~g~~~~~mm~~tas~Qv 183 (457)
+.++...+......+..-++ -..+....||..-..+ .-+|..+|..- ..|=...+.+.=.+|..+||+|+
T Consensus 73 ~~~~~~~L~~lh~~v~~~l~---dE~LWP~SMP~~l~~~-~~IpiA~yg~sn~g~~k~~YR~gL~~RYG~~mQ~isGIHy 148 (377)
T pfam04262 73 IEDTLAFLSDIHRFVQSKLK---GEYLWPLSMPCRLPDE-EQIPIAQYGSSNIGRMKTVYREGLALRYGKLMQMISGIHY 148 (377)
T ss_pred HHHHHHHHHHHHHHHHHHCC---CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHCCCCEEEE
T ss_conf 99999999999999996189---8643567788889971-5676003688661258899999999874600102314787
Q ss_pred EECCCCHHHHH----------------------HHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 51478988999----------------------9999998765678887437865588
Q gi|254781161|r 184 SLDFSSEHDMA----------------------TKLRVSFKLQPLATAIFASSPFAEG 219 (457)
Q Consensus 184 ~id~~~~~d~~----------------------~~~n~a~~l~P~llAL~aNSPf~~G 219 (457)
|+.+++. +. .+.+-..++.++++.||-.||....
T Consensus 149 NfS~~~~--~~~~l~~~~~~~~~~~~f~n~~Y~~liRNf~R~~WLl~YLfGASP~~~~ 204 (377)
T pfam04262 149 NFSLPPD--LWTALFRAQNEEKSARDFQSAAYFRLIRNFYRYGWILPYLFGASPAIDS 204 (377)
T ss_pred ECCCCHH--HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 1357999--9999997504553177775599999999999998999998347710034
No 17
>KOG3754 consensus
Probab=98.54 E-value=4.3e-06 Score=55.71 Aligned_cols=211 Identities=16% Similarity=0.165 Sum_probs=110.4
Q ss_pred CHHHHHHHHHH-CCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCC
Q ss_conf 89999999983-79872035586777653874765784871122349999997555248864612784102334568870
Q gi|254781161|r 13 SIDDLVQHIAS-GIKPQEEFRIGTEHESFIFSRADHRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIGLANPLSKAG 91 (457)
Q Consensus 13 ~~~~l~~~f~~-g~k~~~~~~IG~E~E~flvd~~~~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 91 (457)
.+.|++..+.. +.+....++-|=|+|+.+|+=+|.... ....-..+++|..|+..- ... ++++..
T Consensus 26 GI~Qfl~iyh~~k~r~~D~LkWGDEiEy~vV~fDd~~kk-~rv~l~~e~iL~~L~~~~---~~~----------~png~~ 91 (640)
T KOG3754 26 GIEQFLNIYHALKSRHGDVLKWGDEIEYMVVKFDDKNKK-ARVSLRAEKILNELNEEE---SLT----------EPNGAD 91 (640)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCE-EEEEEEHHHHHHHHHHHH---HCC----------CCCCCC
T ss_conf 699999999998651388000466058999950554630-235520999999864433---102----------667787
Q ss_pred EEECCC-C--CEEE-------ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC------CC----CCCCCH-----
Q ss_conf 341354-2--0242-------011010156778888887888787421038734210------56----878884-----
Q gi|254781161|r 92 ISIEPG-G--QLEL-------STTTLQNVHQIKGEILGYIQILKEITQNLDLGILGM------GF----NPKWKL----- 146 (457)
Q Consensus 92 it~ep~-~--qlE~-------s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~------g~----~P~~~~----- 146 (457)
.+..|. | +||. .+-.+-++.| +....-+.++..++.+.. ..++. |+ .|...+
T Consensus 92 ~lwrPEyG~YMiEgTPg~Pygg~~~~fn~VE--aNMr~RR~~~~~~L~~~e-~~ltiT~FprlG~PgFt~pev~~n~~~~ 168 (640)
T KOG3754 92 VLWRPEYGRYMIEGTPGSPYGGLMASFNFVE--ANMRKRRKIAEYKLSEDE-VPLTITNFPRLGCPGFTNPEVPANPKNA 168 (640)
T ss_pred CCCCCCCCCEEECCCCCCCCCCHHHHEEHHH--HHHHHHHHHHHHHCCCCC-CCEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 4415421333312689998654011110346--778999999986416665-5157743655789998886778886676
Q ss_pred --------HHHHCCHHHHHHHHHHHHHHH-HH---------------------------------------HHHHH--HH
Q ss_conf --------542000001356666654321-12---------------------------------------67888--76
Q gi|254781161|r 147 --------DEMPIMPKSRYVLMKKYMPQV-GT---------------------------------------HGLDM--MF 176 (457)
Q Consensus 147 --------~~~~~~~~~Ry~~m~~~~~~~-g~---------------------------------------~~~~m--m~ 176 (457)
.+..+...+|+.-+...+..+ |. +..+| -+
T Consensus 169 ~asrSlf~PdeaIn~HpRF~tLT~nIr~RRGeKV~invpifkD~nTp~pf~e~~~~~~~ped~~a~~pdhIymDsMGFGM 248 (640)
T KOG3754 169 AASRSLFLPDEAINGHPRFPTLTANIRTRRGEKVAINVPIFKDTNTPSPFDEIYRDWFLPEDARAKKPDHIYMDSMGFGM 248 (640)
T ss_pred CCCCCEECCHHHHHCCCCCCHHHHHHHHCCCCEEEEECCEECCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEECCCCCCC
T ss_conf 32123037677740688741255666640676368822234268999976423444058645656899868872456676
Q ss_pred HHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
Q ss_conf 31340475147898899999999987656788874378655887787432268885202777886
Q gi|254781161|r 177 RTCTTQVSLDFSSEHDMATKLRVSFKLQPLATAIFASSPFAEGRINGFQSWRSEIWRHTDSDRTE 241 (457)
Q Consensus 177 ~tas~Qv~id~~~~~d~~~~~n~a~~l~P~llAL~aNSPf~~G~~~g~~s~R~~i~~~~d~~r~~ 241 (457)
.-|.+||.++-.+-+++-..|..+..+.|+++||+|-||++.|..+.--++=..|-..+| +|++
T Consensus 249 GccCLQvTFQA~ni~eAR~LYDqL~pi~PimlAlSAatP~frGylad~DcRWnVIs~sVD-dRT~ 312 (640)
T KOG3754 249 GCCCLQVTFQACNIDEARYLYDQLTPITPIMLALSAATPAFRGYLADQDCRWNVISGSVD-DRTP 312 (640)
T ss_pred CCEEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHCCCCCCCCCCCCEEECCCC-CCCH
T ss_conf 422457666326734889998743453089998732673650301366543001432446-7896
No 18
>TIGR03105 gln_synth_III glutamine synthetase, type III. This family consists of the type III isozyme of glutamine synthetase, originally described in Rhizobium meliloti, where types I and II also occur.
Probab=98.23 E-value=3.5e-05 Score=50.12 Aligned_cols=163 Identities=18% Similarity=0.207 Sum_probs=85.3
Q ss_pred HHHHHHHHCCCCCCCCEEEEEEEEEEEECCC-CC--CCC---------HH--HHHHHHHHHHHHHHHCCCCEEECCCCEE
Q ss_conf 9999998379872035586777653874765-78--487---------11--2234999999755524886461278410
Q gi|254781161|r 16 DLVQHIASGIKPQEEFRIGTEHESFIFSRAD-HR--PLP---------YD--GEKSIVTILQAIQKKLAWKEIMDKGNII 81 (457)
Q Consensus 16 ~l~~~f~~g~k~~~~~~IG~E~E~flvd~~~-~~--p~~---------~~--~~~~i~~~L~~l~~~~~~~~~~~~~~~~ 81 (457)
++..+-+.|.+ ..+|+|+|+|+++.+. .. |.. |+ .......+++++.+.. ...
T Consensus 104 ~~~~~~~~G~~----~~~g~ElEF~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l---------~~~ 170 (435)
T TIGR03105 104 QLAEAAELGLT----LNTGVECEFFLLRRDEDGSLSIADRADTLAKPCYDQRGLMRRYDVLTEISDAM---------NAL 170 (435)
T ss_pred HHHHHHHCCCC----EEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH---------HHC
T ss_conf 99999965992----89767627999821688985567877767788667200101679999999999---------977
Q ss_pred CCCCCCCCCCEEECCC-CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHH
Q ss_conf 2334568870341354-202420110101567788888878887874210387342105687888454200000135666
Q gi|254781161|r 82 GLANPLSKAGISIEPG-GQLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLM 160 (457)
Q Consensus 82 ~l~~~~~~~~it~ep~-~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m 160 (457)
|+. -..+.-|-+ ||.|+...+.. .-.++.....++..++.++.++|+....+. -|+..
T Consensus 171 Gi~----ve~~~~E~gpGQ~Ei~l~~~~-~l~aAD~~~~~K~~ik~iA~~~G~~ATFMp-KP~~~--------------- 229 (435)
T TIGR03105 171 GWD----PYQNDHEDANGQFEMNFTYAD-ALTTADRHAFFRYMVKEIAEKHGMRATFMP-KPFAD--------------- 229 (435)
T ss_pred CCC----EEEEECCCCCCCEEEEECCCC-HHHHHHHHHHHHHHHHHHHHHCCCEEEECC-CCCCC---------------
T ss_conf 997----188664657981699726799-899999999999999999998099899703-13789---------------
Q ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCCCHH--H-HH-----H---HHH-HHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf 6654321126788876313404751478988--9-99-----9---999-998765678887437865588778743226
Q gi|254781161|r 161 KKYMPQVGTHGLDMMFRTCTTQVSLDFSSEH--D-MA-----T---KLR-VSFKLQPLATAIFASSPFAEGRINGFQSWR 228 (457)
Q Consensus 161 ~~~~~~~g~~~~~mm~~tas~Qv~id~~~~~--d-~~-----~---~~n-~a~~l~P~llAL~aNSPf~~G~~~g~~s~R 228 (457)
.. .+|+|+|+-+.+.+ + |. . .-. .-..+++++.-+-+.+.|+....+ |||
T Consensus 230 -----~~----------GsG~HiH~SL~d~~g~n~f~d~~~~~~~glS~~~~~fiaGlL~~~~~l~a~~~Pt~N---SYk 291 (435)
T TIGR03105 230 -----LT----------GNGCHFHLSLWDEDGRNLFADDSDPNGLGLSKLAYHFIGGILHHAPALCAVLAPTVN---SYK 291 (435)
T ss_pred -----CC----------CCEEEEEEEEECCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCC---CCC
T ss_conf -----99----------870038986775999760368987665554599999999999861323150147765---211
Q ss_pred HH
Q ss_conf 88
Q gi|254781161|r 229 SE 230 (457)
Q Consensus 229 ~~ 230 (457)
..
T Consensus 292 Rl 293 (435)
T TIGR03105 292 RL 293 (435)
T ss_pred CC
T ss_conf 15
No 19
>COG0174 GlnA Glutamine synthetase [Amino acid transport and metabolism]
Probab=98.15 E-value=6.1e-05 Score=48.70 Aligned_cols=103 Identities=20% Similarity=0.301 Sum_probs=65.7
Q ss_pred HHHHHH-HHCCCCCCCCEEEEEEEEEEEECCC-----CCCCCHH------HHHHHHHHHHHHHH---HCCCCEEECCCCE
Q ss_conf 999999-8379872035586777653874765-----7848711------22349999997555---2488646127841
Q gi|254781161|r 16 DLVQHI-ASGIKPQEEFRIGTEHESFIFSRAD-----HRPLPYD------GEKSIVTILQAIQK---KLAWKEIMDKGNI 80 (457)
Q Consensus 16 ~l~~~f-~~g~k~~~~~~IG~E~E~flvd~~~-----~~p~~~~------~~~~i~~~L~~l~~---~~~~~~~~~~~~~ 80 (457)
..++++ ..|..+ ..+|.|+|+||+|... .+|.+.. +.....++.+++.. ..|++..
T Consensus 113 r~~~~l~~~G~~~---~~~g~E~EFfLfd~~~~~~~~~~~~~~g~yf~~~~~~~~~d~~~~i~~~l~~~Gi~ie------ 183 (443)
T COG0174 113 RALARLKDEGLAP---AVVGPELEFFLFDRDGRDPDGGRPADKGGYFDVAPLDEAEDFRRDIVEALEAAGIEIE------ 183 (443)
T ss_pred HHHHHHHHCCCCC---CCEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCE------
T ss_conf 9999998668854---3020241699960366776667668877646765422278999999999998799826------
Q ss_pred ECCCCCCCCCCEEECCC-CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
Q ss_conf 02334568870341354-20242011010156778888887888787421038734210
Q gi|254781161|r 81 IGLANPLSKAGISIEPG-GQLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGM 138 (457)
Q Consensus 81 ~~l~~~~~~~~it~ep~-~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~ 138 (457)
.+--|-+ ||.|+... ..+.-+.+.....++..+..++.++|.....+
T Consensus 184 ----------~~hhEva~gQ~EI~~~-~~~~l~~AD~~~~~K~vvk~vA~~hG~~aTFM 231 (443)
T COG0174 184 ----------AIHHEVAPGQFEINLR-FDDALKAADQIVIFKYVVKEVAEKHGLTATFM 231 (443)
T ss_pred ----------EECCCCCCCCEEEECC-CCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_conf ----------3014505885578337-87889998999999999999999959859994
No 20
>pfam12224 Amidoligase_2 Putative amidoligase enzyme. This family of proteins are likely to act as amidoligase enzymes Protein in this family are found in conserved gene neighborhoods encoding a glutamine amidotransferase-like thiol peptidase (in proteobacteria) or an Aig2 family cyclotransferase protein (in firmicutes).
Probab=97.86 E-value=0.00038 Score=43.83 Aligned_cols=56 Identities=11% Similarity=0.203 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC--C--HHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 356666654321126788876313404751478--9--8899999999987656788874378
Q gi|254781161|r 156 RYVLMKKYMPQVGTHGLDMMFRTCTTQVSLDFS--S--EHDMATKLRVSFKLQPLATAIFASS 214 (457)
Q Consensus 156 Ry~~m~~~~~~~g~~~~~mm~~tas~Qv~id~~--~--~~d~~~~~n~a~~l~P~llAL~aNS 214 (457)
.-+.+..-+...|..+- ..+||+||||+.. + .+...+.++++..+.+.+-.+-.-|
T Consensus 89 ~l~~l~~~Lr~~ga~~t---n~scG~hVHin~~~~~~~~~~l~~~~~~~~~~e~~l~~~~~vd 148 (250)
T pfam12224 89 QLQELVRALRRAGAKGT---NASCGFHVHINAEPPDLTAQTLRNLLQAYALLEDWLRKALPVD 148 (250)
T ss_pred HHHHHHHHHHHCCCCCC---CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999998288346---7754777871575678898999999999999999999855877
No 21
>PRK09469 glnA glutamine synthetase; Provisional
Probab=97.35 E-value=0.011 Score=35.05 Aligned_cols=41 Identities=20% Similarity=0.160 Sum_probs=32.6
Q ss_pred CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
Q ss_conf 420242011010156778888887888787421038734210
Q gi|254781161|r 97 GGQLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGM 138 (457)
Q Consensus 97 ~~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~ 138 (457)
.||.|+...+... ..++.....++..++.++.++|+..-.+
T Consensus 217 ~GQ~Ei~~~~~~~-l~aAD~~~~~k~~vk~iA~~~g~~atFm 257 (469)
T PRK09469 217 AGQNEVATRFNTM-TKKADEIQIYKYVVHNVAHAFGKTATFM 257 (469)
T ss_pred CCEEEEECCCCCH-HHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 9704897157869-9999899999999999999749878882
No 22
>TIGR01434 glu_cys_ligase glutamate--cysteine ligase; InterPro: IPR006334 These sequences represent glutamate--cysteine ligase, also known as gamma-glutamylcysteine synthetase, an enzyme in the biosynthesis of glutathione (GSH). GSH is one of several low molecular weight cysteine derivatives that can serve to protect against oxidative damage and participate in biosynthetic or detoxification reactions.; GO: 0004357 glutamate-cysteine ligase activity, 0006750 glutathione biosynthetic process.
Probab=97.26 E-value=0.014 Score=34.41 Aligned_cols=366 Identities=15% Similarity=0.164 Sum_probs=186.1
Q ss_pred EEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCEECCCCCCCCCCEEECCC-CCEEEECCHHHHHH
Q ss_conf 86777653874765784871122349999997555248864612784102334568870341354-20242011010156
Q gi|254781161|r 33 IGTEHESFIFSRADHRPLPYDGEKSIVTILQAIQKKLAWKEIMDKGNIIGLANPLSKAGISIEPG-GQLELSTTTLQNVH 111 (457)
Q Consensus 33 IG~E~E~flvd~~~~~p~~~~~~~~i~~~L~~l~~~~~~~~~~~~~~~~~l~~~~~~~~it~ep~-~qlE~s~~~~~~~~ 111 (457)
=|+|=|..=|+.++.-+.+. .| ..|+. .+...-||.+-. +-||+-++.-.+++
T Consensus 21 rGiEREtLRv~~dG~la~T~-HP----~alGS---------------------~LTHkwITTDfsEaLLEFITPt~~di~ 74 (518)
T TIGR01434 21 RGIERETLRVDSDGKLAKTI-HP----RALGS---------------------ALTHKWITTDFSEALLEFITPTEDDID 74 (518)
T ss_pred CCCCHHHEEECCCCCCCCCC-CH----HHHHH---------------------CCCCCCCHHHHHHHHHHCCCCCCCCHH
T ss_conf 45211220035788436676-71----46401---------------------046875225677776313589861078
Q ss_pred HHHHHHHHHHHHHHHH-HHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHH-HHHHHHHHHHHH-----HHHHHHCCCEEE
Q ss_conf 7788888878887874-210387342105687888454200000135666-665432112678-----887631340475
Q gi|254781161|r 112 QIKGEILGYIQILKEI-TQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLM-KKYMPQVGTHGL-----DMMFRTCTTQVS 184 (457)
Q Consensus 112 e~~~~~~~~~~~l~~i-l~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m-~~~~~~~g~~~~-----~mm~~tas~Qv~ 184 (457)
.. .+++..|... +.+.+-.-+..-.+|..- .+...++..||.-- .-.|+.+=+.|+ ..|.+++|+|=|
T Consensus 75 ~~----L~fl~dlHrftasKl~~ErmWp~S~Pc~~-~d~~~I~iAqYG~S~iGr~Kt~YR~GLknRYG~l~qtIsGiHYN 149 (518)
T TIGR01434 75 DL----LSFLEDLHRFTASKLDDERMWPLSMPCEL-ADEEDIEIAQYGKSNIGRLKTVYRKGLKNRYGKLMQTISGIHYN 149 (518)
T ss_pred HH----HHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 89----99999999998654178501656686206-88886531016885524047888888776645677655120010
Q ss_pred E---------------------CCCCHHHHHHHHHHHHHHHHHHHHHHCCCC-----CCCCCCCCCCCHHHH--H-----
Q ss_conf 1---------------------478988999999999876567888743786-----558877874322688--8-----
Q gi|254781161|r 185 L---------------------DFSSEHDMATKLRVSFKLQPLATAIFASSP-----FAEGRINGFQSWRSE--I----- 231 (457)
Q Consensus 185 i---------------------d~~~~~d~~~~~n~a~~l~P~llAL~aNSP-----f~~G~~~g~~s~R~~--i----- 231 (457)
+ |+.|.. .++.++=..++++++..||-.|| |+.|+++.+.--|.. +
T Consensus 150 FSLP~~fW~~~~~~~~~~ls~~d~iSag-Y~~LIRNyyRfgW~~pYLFGaSPAi~s~FL~g~p~~~~fek~de~~~YLPy 228 (518)
T TIGR01434 150 FSLPLAFWTALRQAEESELSEKDLISAG-YLALIRNYYRFGWVVPYLFGASPAISSSFLKGKPKKLKFEKLDEDIYYLPY 228 (518)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEECCH
T ss_conf 2116889988721357755430256499-999877654576577555065555400654588855652002476114643
Q ss_pred ----------HHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHC--CC---CCC-CCC
Q ss_conf ----------52027778865654457754199999998514531630587532667888788512--64---321-013
Q gi|254781161|r 232 ----------WRHTDSDRTEILPFILRDNSNFEHYAQWALDIPMYFILRKKEYYCCTDITFRQFMN--GA---LKG-RIK 295 (457)
Q Consensus 232 ----------~~~~d~~r~~~~~~~~~~~~~~e~y~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~---~~~-~~~ 295 (457)
+++.. ...+...|++..+|-+....++.+|.---.+-|..-+. ..|.+ .+ |+. ++.
T Consensus 229 aTSLRlSDlGY~N~~---~~~L~i~fNDl~eYi~sl~~A~kTPs~~y~~iG~k~dh-----G~~~QlNtNiLQIENElY~ 300 (518)
T TIGR01434 229 ATSLRLSDLGYSNKA---QADLTITFNDLQEYIDSLKRAVKTPSKKYEKIGVKKDH-----GEFVQLNTNILQIENELYA 300 (518)
T ss_pred HHHHHHHHHCCCCCC---CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCC-----CCEEEECCCHHHHHHHHCC
T ss_conf 677666530346421---02687530357899999998501787368637760136-----7754101013566453237
Q ss_pred CCCC-----CHHHHHHCCCCCCCCCCCCCCEEECCCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
Q ss_conf 6554-----6677531123456643335501211578888---6675555888988765388544323202369999999
Q gi|254781161|r 296 EWHP-----TLEDWENHLSTLFPAVRLRNCLEMRGADSGR---LENIFAVAAFWTGILYDSSALQNADHLTSSWSFYDIN 367 (457)
Q Consensus 296 ~~~~-----t~~d~~~~~~~~f~~~r~~~~IEiR~~Ds~P---~~~~~a~aAf~~gl~~~~~~~~~~~~~~~~~~~~~~~ 367 (457)
..+| +|+.....+. .|.=.|||+|++|--| +.-.-.-+-|. =++..-.++....+ ...-+.-+..
T Consensus 301 ~IRPKRvT~~GEsp~~AL~-----~rGieYvEvRsLDiNPFsPiGid~~~~rfL-DlFl~wCal~DsP~-~~~~e~l~tt 373 (518)
T TIGR01434 301 SIRPKRVTKDGESPVEALK-----ARGIEYVEVRSLDINPFSPIGIDKDQVRFL-DLFLVWCALADSPK-LDKDELLLTT 373 (518)
T ss_pred CCCCCCCCCCCCCHHHHHH-----HCCCEEEEEEEECCCCCCCCCCCHHHHHHH-HHHHHHHHHHCCCC-CCCCCHHHHH
T ss_conf 8888245568777799997-----389308998531368898766478899999-89999999834844-4665302667
Q ss_pred HHHHHHHHHHHCCCC--------CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH---HHCC-CCCHHH
Q ss_conf 999999763115866--------8830899999999999998985231245564588999999999---9838-985899
Q gi|254781161|r 368 KLNNTVPSKGMRSTV--------RGQSLKDIAIQILTFAHQGLKNRSAKNHLQEDETIFLKPLEKI---IHNN-QTTADE 435 (457)
Q Consensus 368 ~~~~~aar~Gl~a~~--------~~~~~~~l~~~ll~~A~~GL~~r~~~~~~~~dE~~yL~~l~~~---i~~g-~t~A~~ 435 (457)
.||.+++..|-.=.+ ..+++..++++|+.-..+-- ..+|+...+|. |=..+.+. +++- -|++-+
T Consensus 374 ~Nw~rvi~EgRkPgl~l~i~~~~~~~~L~~~g~~lf~dl~~~A---~~LDs~~gge~-yqkac~e~~a~~~npELT~SAq 449 (518)
T TIGR01434 374 KNWERVIKEGRKPGLKLQINNEGETVELQKVGKELFKDLKEVA---ALLDSARGGEA-YQKACKELRAKLKNPELTYSAQ 449 (518)
T ss_pred HHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHH---HHHCCCCCCHH-HHHHHHHHHHHHHCCCCCHHHH
T ss_conf 6668762037898862423578872127999999999999999---98501158578-9999999888740778877699
Q ss_pred HHHHHHHHHCCCHHH
Q ss_conf 999871022188899
Q gi|254781161|r 436 MLAAYHTRWGKSIDP 450 (457)
Q Consensus 436 ~l~~y~~~~~~~i~~ 450 (457)
.|+.-... +++|..
T Consensus 450 ~L~~m~~~-Gesi~~ 463 (518)
T TIGR01434 450 VLKVMIEE-GESIEA 463 (518)
T ss_pred HHHHHHHC-CCCHHH
T ss_conf 99999742-742578
No 23
>pfam00120 Gln-synt_C Glutamine synthetase, catalytic domain.
Probab=97.13 E-value=0.011 Score=35.01 Aligned_cols=103 Identities=21% Similarity=0.252 Sum_probs=63.6
Q ss_pred HHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCC--CC--------C----H-H--HHHHHHHHHHHHHHH---CCCCEE
Q ss_conf 9999999837987203558677765387476578--48--------7----1-1--223499999975552---488646
Q gi|254781161|r 15 DDLVQHIASGIKPQEEFRIGTEHESFIFSRADHR--PL--------P----Y-D--GEKSIVTILQAIQKK---LAWKEI 74 (457)
Q Consensus 15 ~~l~~~f~~g~k~~~~~~IG~E~E~flvd~~~~~--p~--------~----~-~--~~~~i~~~L~~l~~~---~~~~~~ 74 (457)
.++..+=+.|.. +.+|+|+|+|+++..... +. + + + .......+++++.+. .|.+
T Consensus 10 ~~~~~~~~~Gl~----~~~g~E~EF~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~i~~~l~~~Gi~-- 83 (257)
T pfam00120 10 RALARLAELGYT----PYFGPEQEFFLFDDVRPGGGPPGGYPDPRGPYYGGYFPVAPLDEARDIRRDIVKALEAAGIP-- 83 (257)
T ss_pred HHHHHHHHCCCE----EEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC--
T ss_conf 999999976995----97995668799857777767766887988876777577763031899999999999977998--
Q ss_pred ECCCCEECCCCCCCCCCEEECCC-CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
Q ss_conf 12784102334568870341354-20242011010156778888887888787421038734210
Q gi|254781161|r 75 MDKGNIIGLANPLSKAGISIEPG-GQLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGILGM 138 (457)
Q Consensus 75 ~~~~~~~~l~~~~~~~~it~ep~-~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~~~~ 138 (457)
-..+.-|-+ ||.|+.+.+. ..-+++.....++..++.++.++|+....+
T Consensus 84 --------------ve~~~~E~gpgQ~Ei~l~~~-~~l~aAD~~~~~k~~ik~vA~~~G~~atFm 133 (257)
T pfam00120 84 --------------VEGIHHEVAPGQHEIDFRFA-DALEAADNLQLFKYVVKRVAEKHGLTATFM 133 (257)
T ss_pred --------------CEEEECCCCCCCEEEEECCC-CHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf --------------18866575798579962546-498886999999999999999839679970
No 24
>TIGR00653 GlnA glutamine synthetase, type I; InterPro: IPR004809 Glutamine synthetase type I (or glutamate-ammonia ligase) has a dodecameric form, which can be subdivided into 1-alpha and 1-beta forms. The phylogeny of the 1-alpha and 1-beta forms appears polyphyletic. Escherichia coli, Synechocystis sp. (strain PCC 6803) , Aquifex aeolicus, and the crenarcheon Sulfolobus acidocaldarius have form 1-beta, while Bacillus subtilis, Thermotoga maritima, and various euryarchaea has form 1-alpha. The 1-beta dodecamer from the crenarcheon S. acidocaldarius differs from that in E. coli in that it is not regulated by adenylation. ; GO: 0004356 glutamate-ammonia ligase activity, 0009399 nitrogen fixation, 0005737 cytoplasm.
Probab=90.61 E-value=1.1 Score=22.75 Aligned_cols=31 Identities=23% Similarity=0.370 Sum_probs=22.8
Q ss_pred HHHHHHHHH-HCCCCCCCCEEEEEEEEEEEECCC
Q ss_conf 999999998-379872035586777653874765
Q gi|254781161|r 14 IDDLVQHIA-SGIKPQEEFRIGTEHESFIFSRAD 46 (457)
Q Consensus 14 ~~~l~~~f~-~g~k~~~~~~IG~E~E~flvd~~~ 46 (457)
.....++++ +|+-. ...+|-|-|+||+|...
T Consensus 114 A~rae~~L~~~~~g~--~~~fGPEpEFFlFd~~~ 145 (486)
T TIGR00653 114 AKRAEEYLKSTGIGD--TAYFGPEPEFFLFDSIE 145 (486)
T ss_pred HHHHHHHHHCCCCCC--EEEECCCCEEEECCCCC
T ss_conf 999999862146773--77865873121005465
No 25
>KOG0683 consensus
Probab=87.46 E-value=0.19 Score=27.42 Aligned_cols=110 Identities=16% Similarity=0.148 Sum_probs=62.6
Q ss_pred HHHHHHHHHCC-CCCCCCEEEEEEEEEEEECCCCCCC------------CHHHHHHHHHHHHHHH-HHCCCCEEECCCCE
Q ss_conf 99999998379-8720355867776538747657848------------7112234999999755-52488646127841
Q gi|254781161|r 15 DDLVQHIASGI-KPQEEFRIGTEHESFIFSRADHRPL------------PYDGEKSIVTILQAIQ-KKLAWKEIMDKGNI 80 (457)
Q Consensus 15 ~~l~~~f~~g~-k~~~~~~IG~E~E~flvd~~~~~p~------------~~~~~~~i~~~L~~l~-~~~~~~~~~~~~~~ 80 (457)
...++.+.... |+. ....|.|+|+.+++..++.|. ||+.-.|+.++..+-. +.....-+....++
T Consensus 119 ~~c~~~~~~~~~~~~-~PWfg~Eqeyt~l~~~~~~p~gwp~~GFp~Pqgpyyc~VGad~~~~rdiveahy~acLyaGl~i 197 (380)
T KOG0683 119 VACARIMPKLSTKDT-EPWFGMEQEYTLLDALDGHPFGWPKGGFPGPQGPYYCGVGADRVFGRDIVEAHYRACLYAGLNI 197 (380)
T ss_pred HHHHHHHCCCCCCCC-CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHEE
T ss_conf 347887434552345-8753356787765045688464776688888777000026630124123430688877403023
Q ss_pred ECCCCCCCCCCEEECCC-CCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
Q ss_conf 02334568870341354-20242011010156778888887888787421038734
Q gi|254781161|r 81 IGLANPLSKAGISIEPG-GQLELSTTTLQNVHQIKGEILGYIQILKEITQNLDLGI 135 (457)
Q Consensus 81 ~~l~~~~~~~~it~ep~-~qlE~s~~~~~~~~e~~~~~~~~~~~l~~il~~~~~~~ 135 (457)
.|. -.|-. ||.|++.+||..+.-. ..+-..|-.|..|+++.|+..
T Consensus 198 ~G~---------N~EvmPgQwEfqvGp~~GI~~g-D~lw~aR~il~rVae~~Gvia 243 (380)
T KOG0683 198 SGI---------NVEVMPGQWEFQVGPCEGISMG-DQLWMARYILHRVAEKFGVIA 243 (380)
T ss_pred CCC---------CCCCCCCEEEEEECCHHCCCCC-HHHHHHHHHHHHHHHHHCEEE
T ss_conf 363---------2313475048854450011220-047899999999999849168
No 26
>cd02166 NMNAT_Archaea This family of archaeal proteins exhibits nicotinamide-nucleotide adenylyltransferase (NMNAT) activity utilizing the salvage pathway to synthesize NAD. In some cases, the enzyme was tested and found also to have the activity of nicotinate-nucleotide adenylyltransferase an enzyme of NAD de novo biosynthesis, although with a higher Km. In some archaeal species, a number of proteins which are uncharacterized with respect to activity, are also present.
Probab=60.77 E-value=11 Score=16.76 Aligned_cols=51 Identities=25% Similarity=0.435 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 887888787421038734210568788845420000013566666543211
Q gi|254781161|r 118 LGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKKYMPQVG 168 (457)
Q Consensus 118 ~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m~~~~~~~g 168 (457)
.+|+..+..++...+.-+++.|..-.+.....+++..+|.++...-+...|
T Consensus 13 ~GHl~~i~~a~~~~d~~ii~igs~~~~~~~~NPft~~ER~~Mi~~al~~~~ 63 (163)
T cd02166 13 LGHLQVIKWILEEVDELIIGIGSAQESHTLRNPFTAGERVLMIRKALEEAG 63 (163)
T ss_pred HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 789999999997489279997778667778899889999999999999669
No 27
>PRK12305 thrS threonyl-tRNA synthetase; Reviewed
Probab=58.30 E-value=9.8 Score=17.03 Aligned_cols=45 Identities=24% Similarity=0.313 Sum_probs=24.7
Q ss_pred CHHHHHHHHH--HCCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHH
Q ss_conf 8999999998--37987203558677765387476578487112234
Q gi|254781161|r 13 SIDDLVQHIA--SGIKPQEEFRIGTEHESFIFSRADHRPLPYDGEKS 57 (457)
Q Consensus 13 ~~~~l~~~f~--~g~k~~~~~~IG~E~E~flvd~~~~~p~~~~~~~~ 57 (457)
++++|.+|++ +-.|.+...+||-|+++|.++...+.-.|+-.|+|
T Consensus 161 ~k~~L~~yl~~~eEakkRDHRklGkel~LF~f~~~~gpG~~~wlP~G 207 (576)
T PRK12305 161 SKEELDKYLAILQERKERDHRKIGKDLKLFTFSSLAGQGFPIWLENG 207 (576)
T ss_pred CHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEECCCCCCCCEEECCCH
T ss_conf 98899999999999986577876421565872344688764674767
No 28
>PRK03772 threonyl-tRNA synthetase; Validated
Probab=58.14 E-value=7.8 Score=17.63 Aligned_cols=63 Identities=8% Similarity=0.184 Sum_probs=37.9
Q ss_pred CCHHHHHHHHHH--CCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHH------HHHHHHHHHHHCCCCEEE
Q ss_conf 489999999983--7987203558677765387476578487112234------999999755524886461
Q gi|254781161|r 12 TSIDDLVQHIAS--GIKPQEEFRIGTEHESFIFSRADHRPLPYDGEKS------IVTILQAIQKKLAWKEIM 75 (457)
Q Consensus 12 ~~~~~l~~~f~~--g~k~~~~~~IG~E~E~flvd~~~~~p~~~~~~~~------i~~~L~~l~~~~~~~~~~ 75 (457)
.++++|.+|++. -.|.+.+.+||-|+++|.++.. ..-.|+-.|+| +++.++......|++++.
T Consensus 224 ~~k~~L~~~l~~~eEakkRDHRklGkel~LF~f~~~-~pG~~fwlP~G~~i~~~le~~~r~~~~~~Gy~eV~ 294 (642)
T PRK03772 224 ADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEE-APGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVK 294 (642)
T ss_pred CCHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEECCC-CCCCEEECCCHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 898999999999999986588888775220475465-88763665858899999999999999986985985
No 29
>TIGR02699 archaeo_AfpA archaeoflavoprotein AfpA; InterPro: IPR014072 The prototypical member of this archaeal protein family is AF1518 from Archaeoglobus fulgidus. This homodimer with two non-covalently bound FMN cofactors can receive electrons from ferredoxin, but not from a number of other electron donors such as NADH or rubredoxin. It can then donate electrons to various reductases..
Probab=56.86 E-value=3.9 Score=19.43 Aligned_cols=52 Identities=23% Similarity=0.275 Sum_probs=35.2
Q ss_pred HHCCCEEEECC--C-CHHHHHHHHHHHHHHHHHH----HHHHCCCCCCCCC-CCCCCCHH
Q ss_conf 31340475147--8-9889999999998765678----8874378655887-78743226
Q gi|254781161|r 177 RTCTTQVSLDF--S-SEHDMATKLRVSFKLQPLA----TAIFASSPFAEGR-INGFQSWR 228 (457)
Q Consensus 177 ~tas~Qv~id~--~-~~~d~~~~~n~a~~l~P~l----lAL~aNSPf~~G~-~~g~~s~R 228 (457)
...+..|.+++ + ..+.-++.|.+.+.|.-=+ +=+-|||||+-|+ -+|+...-
T Consensus 25 ~~y~~rV~~~vfLSK~G~~VvKyY~L~~~L~~~F~~~~Ve~~ANsPFLaG~lQ~G~Ydfl 84 (176)
T TIGR02699 25 KKYGDRVEIDVFLSKAGEQVVKYYKLWDKLEEDFDDLRVEINANSPFLAGQLQLGKYDFL 84 (176)
T ss_pred HHCCCEEEEEEEEECCCCEEEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEE
T ss_conf 205987899998605867453166767888631064058707867810064134601102
No 30
>TIGR00418 thrS threonyl-tRNA synthetase; InterPro: IPR002320 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology . The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric . Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices , and are mostly dimeric or multimeric, containing at least three conserved regions , , . However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases; these synthetases are further divided into three subclasses, a, b and c, according to sequence homology. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases . Threonyl-tRNA synthetase (6.1.1.3 from EC) exists as a monomer and belongs to class IIa. The enzyme from Escherichia coli represses the translation of its own mRNA. The crystal structure of the complex between tRNA(Thr) and ThrRS show structural features that reveal novel strategies for providing specificity in tRNA selection. These include an amino-terminal domain containing a novel protein fold that makes minor groove contacts with the tRNA acceptor stem. The enzyme induces a large deformation of the anticodon loop, resulting in an interaction between two adjacent anticodon bases, which accounts for their prominent role in tRNA identity and translational regulation. A zinc ion found in the active site is implicated in amino acid recognition/discrimination . The zinc ion may act to ensure that only amino acids that possess a hydroxyl group attached to the beta-position are activated .; GO: 0004829 threonine-tRNA ligase activity, 0005524 ATP binding, 0006412 translation, 0006435 threonyl-tRNA aminoacylation, 0005737 cytoplasm.
Probab=54.58 E-value=6.1 Score=18.28 Aligned_cols=57 Identities=23% Similarity=0.271 Sum_probs=38.3
Q ss_pred HHHCCHHHHHHHHHHCC--CCC--CCCEEEEEEEEEEEECCCCCCCCHHHHHH--HHHHHHHH
Q ss_conf 12148999999998379--872--03558677765387476578487112234--99999975
Q gi|254781161|r 9 TIVTSIDDLVQHIASGI--KPQ--EEFRIGTEHESFIFSRADHRPLPYDGEKS--IVTILQAI 65 (457)
Q Consensus 9 ~~~~~~~~l~~~f~~g~--k~~--~~~~IG~E~E~flvd~~~~~p~~~~~~~~--i~~~L~~l 65 (457)
.--+++.+|.+|+..-. +.+ ++.+||-|+|+|.++..-..=.|+--++| |-++|++.
T Consensus 159 ~~~~~k~~L~~yl~~~eEa~~r~PDHRklGKeL~Lf~f~~~~gpG~~~WlPkG~~ir~~ledf 221 (595)
T TIGR00418 159 TAFADKKQLAEYLKRLEEAKKREPDHRKLGKELELFSFEPEIGPGLPFWLPKGALIRNLLEDF 221 (595)
T ss_pred ECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHH
T ss_conf 014587899999999999742685725675453123458320487414657646789999999
No 31
>PRK12304 thrS threonyl-tRNA synthetase; Reviewed
Probab=50.77 E-value=9.9 Score=17.01 Aligned_cols=41 Identities=15% Similarity=0.254 Sum_probs=16.4
Q ss_pred CCCCCCEEEEEEE-EEEEECCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 8720355867776-5387476578487112234999999755
Q gi|254781161|r 26 KPQEEFRIGTEHE-SFIFSRADHRPLPYDGEKSIVTILQAIQ 66 (457)
Q Consensus 26 k~~~~~~IG~E~E-~flvd~~~~~p~~~~~~~~i~~~L~~l~ 66 (457)
.|...+.||--+| -|-+|-+-..|++-+....|++.++++.
T Consensus 58 ~p~~k~~iGP~ie~GFYYDf~~~~~~t~~Dl~~IE~~M~~ii 99 (604)
T PRK12304 58 YPDAKFFVGPVVEEGFYYDFRVESKIGEEDLPKIEKKMKELA 99 (604)
T ss_pred CCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
T ss_conf 799769878975881158515699899899999999999999
No 32
>PRK12444 threonyl-tRNA synthetase; Reviewed
Probab=50.09 E-value=14 Score=16.11 Aligned_cols=63 Identities=24% Similarity=0.374 Sum_probs=39.0
Q ss_pred CCHHHHHHHHHH--CCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHH------HHHHHHHHHHCCCCEEE
Q ss_conf 489999999983--79872035586777653874765784871122349------99999755524886461
Q gi|254781161|r 12 TSIDDLVQHIAS--GIKPQEEFRIGTEHESFIFSRADHRPLPYDGEKSI------VTILQAIQKKLAWKEIM 75 (457)
Q Consensus 12 ~~~~~l~~~f~~--g~k~~~~~~IG~E~E~flvd~~~~~p~~~~~~~~i------~~~L~~l~~~~~~~~~~ 75 (457)
.++++|.+|++. -.|.+.+.+||-|+++|.++.. ..-.|+-.|+|. ++.+++.....|++++.
T Consensus 227 ~~k~~L~~yl~~leEakkRDHRklGkel~LF~f~~~-~pG~~fwlP~G~~i~~~le~~~r~~~~~~GY~eV~ 297 (639)
T PRK12444 227 SSQKELEEYLHFVEEAAKRNHRKLGNELELFMFSEE-APGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVR 297 (639)
T ss_pred CCHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEECCC-CCCCEEEECCHHHHHHHHHHHHHHHHHHCCCEEEC
T ss_conf 885779999999999886478876532272882277-89744784678699999999999999983987822
No 33
>COG3968 Uncharacterized protein related to glutamine synthetase [General function prediction only]
Probab=50.01 E-value=10 Score=16.85 Aligned_cols=38 Identities=18% Similarity=0.383 Sum_probs=23.0
Q ss_pred HHHCCHHHHHHH-------HHHCCCCCCCCEEEEEEEEEEEECCC
Q ss_conf 121489999999-------98379872035586777653874765
Q gi|254781161|r 9 TIVTSIDDLVQH-------IASGIKPQEEFRIGTEHESFIFSRAD 46 (457)
Q Consensus 9 ~~~~~~~~l~~~-------f~~g~k~~~~~~IG~E~E~flvd~~~ 46 (457)
.+++++++|-.. |-.....+-...+|.|+|+|+||...
T Consensus 187 PLLRSv~Al~kaa~~vL~llGn~~~~~V~s~~GaEQEYFlvd~~~ 231 (724)
T COG3968 187 PLLRSVDALSKAAIRVLRLLGNTTSQKVFSNVGAEQEYFLVDKKS 231 (724)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCEEEEECHHH
T ss_conf 067769988888999999856764112136778431368861101
No 34
>PRK00413 thrS threonyl-tRNA synthetase; Reviewed
Probab=46.47 E-value=15 Score=15.89 Aligned_cols=62 Identities=18% Similarity=0.276 Sum_probs=35.0
Q ss_pred CCHHHHHHHHHHC--CCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHH------HHHHHHHHHHCCCCEE
Q ss_conf 4899999999837--9872035586777653874765784871122349------9999975552488646
Q gi|254781161|r 12 TSIDDLVQHIASG--IKPQEEFRIGTEHESFIFSRADHRPLPYDGEKSI------VTILQAIQKKLAWKEI 74 (457)
Q Consensus 12 ~~~~~l~~~f~~g--~k~~~~~~IG~E~E~flvd~~~~~p~~~~~~~~i------~~~L~~l~~~~~~~~~ 74 (457)
.++++|.+|++.- .|.+.+.+||-|+++|-++.. ..-.|+-.|+|. ++.++......|++++
T Consensus 221 ~~k~~L~~~l~~~eEakkRDHRklGkel~LF~f~~~-~pGl~~w~P~G~~i~~~le~~~r~~~~~~Gy~eV 290 (639)
T PRK00413 221 ADKEDLDAYLHRLEEAEKRDHRKLGKELDLFSFQEE-GPGLPFWHPKGWIIRNELEDYMRRRHLKAGYQEV 290 (639)
T ss_pred CCHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEECCC-CCCCEEECCCHHHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 998999999999999885288888774351570366-8876466376899999999999999998698598
No 35
>PRK11789 N-acetyl-anhydromuranmyl-L-alanine amidase; Provisional
Probab=44.70 E-value=20 Score=15.17 Aligned_cols=10 Identities=30% Similarity=0.591 Sum_probs=5.1
Q ss_pred EEECCCCCCC
Q ss_conf 1211578888
Q gi|254781161|r 321 LEMRGADSGR 330 (457)
Q Consensus 321 IEiR~~Ds~P 330 (457)
||+=..|..|
T Consensus 117 IELeG~~~~~ 126 (186)
T PRK11789 117 IELEGTDTLP 126 (186)
T ss_pred EEEECCCCCC
T ss_conf 9863788999
No 36
>PRK04483 threonyl-tRNA synthetase; Validated
Probab=43.99 E-value=20 Score=15.10 Aligned_cols=62 Identities=13% Similarity=0.199 Sum_probs=37.2
Q ss_pred CCHHHHHHHHHH--CCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHH------HHHHHHHHHHCCCCEE
Q ss_conf 489999999983--79872035586777653874765784871122349------9999975552488646
Q gi|254781161|r 12 TSIDDLVQHIAS--GIKPQEEFRIGTEHESFIFSRADHRPLPYDGEKSI------VTILQAIQKKLAWKEI 74 (457)
Q Consensus 12 ~~~~~l~~~f~~--g~k~~~~~~IG~E~E~flvd~~~~~p~~~~~~~~i------~~~L~~l~~~~~~~~~ 74 (457)
.++++|.+|++. -.|.+.+.+||-|+++|-++.. ..-.|+-.|+|. ++.+++.....|++++
T Consensus 224 ~~k~~L~~yl~~~eEakkRDHRklGkel~LF~f~~~-~pG~~~wlP~G~~i~~~le~~~r~~~~~~Gy~eV 293 (634)
T PRK04483 224 ADKKQLDAYILRMEEADKRDHRKIGKAQDLFHLQEE-APGLVFWHPKGWSLWQVVEQYMRKVYRDSGYGEV 293 (634)
T ss_pred CCHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEECCC-CCCCEEECCCHHHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 898999999999999886588887542110673377-8864388166899999999999999998299599
No 37
>COG3023 ampD N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane]
Probab=34.43 E-value=29 Score=14.19 Aligned_cols=26 Identities=31% Similarity=0.339 Sum_probs=13.5
Q ss_pred EEECCCCC--CC--HHHHHHHHHHHHHHHH
Q ss_conf 12115788--88--6675555888988765
Q gi|254781161|r 321 LEMRGADS--GR--LENIFAVAAFWTGILY 346 (457)
Q Consensus 321 IEiR~~Ds--~P--~~~~~a~aAf~~gl~~ 346 (457)
||+|..+. .| ....-++.++.+.++.
T Consensus 111 lvN~G~~~~~~py~~AQiqal~~L~k~i~~ 140 (257)
T COG3023 111 LVNRGTDASGPPYTEAQIQALIALLKDIIA 140 (257)
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 852797778899899999999999999999
No 38
>PRK01153 nicotinamide-nucleotide adenylyltransferase; Provisional
Probab=33.32 E-value=30 Score=14.08 Aligned_cols=51 Identities=22% Similarity=0.395 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 887888787421038734210568788845420000013566666543211
Q gi|254781161|r 118 LGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKKYMPQVG 168 (457)
Q Consensus 118 ~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m~~~~~~~g 168 (457)
.+|+..+..++...+.-+++.|.--.+.....+++..+|++++..-+...|
T Consensus 14 ~GHl~~i~~al~~~d~vii~Igsa~~~~~~~NPft~~ER~~Mi~~~L~~~~ 64 (170)
T PRK01153 14 KGHLEVIKWILEEVDELIIGIGSAQESHTLKNPFTAGERIMMIRKALEEAG 64 (170)
T ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 789999999997389259995566557778999889999999999999759
No 39
>COG1029 FwdB Formylmethanofuran dehydrogenase subunit B [Energy production and conversion]
Probab=30.85 E-value=33 Score=13.82 Aligned_cols=159 Identities=15% Similarity=0.230 Sum_probs=73.0
Q ss_pred EEEECCCCCCCCHHHHHH-HHHHHHHHHHH--CCCCEEECCCCEECCCCCCCCCCEEECCCCCEEEECCHHHHHHHHHHH
Q ss_conf 387476578487112234-99999975552--488646127841023345688703413542024201101015677888
Q gi|254781161|r 40 FIFSRADHRPLPYDGEKS-IVTILQAIQKK--LAWKEIMDKGNIIGLANPLSKAGISIEPGGQLELSTTTLQNVHQIKGE 116 (457)
Q Consensus 40 flvd~~~~~p~~~~~~~~-i~~~L~~l~~~--~~~~~~~~~~~~~~l~~~~~~~~it~ep~~qlE~s~~~~~~~~e~~~~ 116 (457)
++++...++||.|++-.- +.++|..-..+ |+|....-+...++++. .-+.++.+.-....|+.-.-..-.
T Consensus 53 ~ik~~g~~k~v~~deAie~Aa~ILv~aKrPllyg~s~tscEA~~~giel-------aE~~gaviD~~asvchGp~~~alq 125 (429)
T COG1029 53 MIKDDGELKPVDYDEAIEKAAEILVNAKRPLLYGWSSTSCEAQELGIEL-------AEKLGAVIDSNASVCHGPSVLALQ 125 (429)
T ss_pred EEECCCCEEECCHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHH-------HHHHCCEECCCCCCCCCHHHHHHH
T ss_conf 5822894213249999999999998267852623553218899999999-------987372774787400565788998
Q ss_pred HHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHCCHHHHHHHHHH-HHHHHHHHHHHH---------HHHHCCCEEEEC
Q ss_conf 8887888787421038734210568788845420000013566666-543211267888---------763134047514
Q gi|254781161|r 117 ILGYIQILKEITQNLDLGILGMGFNPKWKLDEMPIMPKSRYVLMKK-YMPQVGTHGLDM---------MFRTCTTQVSLD 186 (457)
Q Consensus 117 ~~~~~~~l~~il~~~~~~~~~~g~~P~~~~~~~~~~~~~Ry~~m~~-~~~~~g~~~~~m---------m~~tas~Qv~id 186 (457)
-.+.-....+-..+..--++..|++|.... +.-..||-.... ++...|.....+ ....|-.|+|+.
T Consensus 126 e~g~p~~TlgevKNraDviVyWGtNP~~sh----PRhmSRYs~f~RG~~~~rGr~dRtvIvVD~RkT~TAklad~~~qi~ 201 (429)
T COG1029 126 EAGKPTATLGEVKNRADVIVYWGTNPMHSH----PRHMSRYSVFPRGFFRPRGREDRTVIVVDPRKTATAKLADNHVQIK 201 (429)
T ss_pred HCCCCCCCHHHHCCCCCEEEEECCCCCCCC----CHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHEEECC
T ss_conf 559866551221256658999578843235----2021002303364224577666449998067672566543217568
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 78988999999999876567888743786558
Q gi|254781161|r 187 FSSEHDMATKLRVSFKLQPLATAIFASSPFAE 218 (457)
Q Consensus 187 ~~~~~d~~~~~n~a~~l~P~llAL~aNSPf~~ 218 (457)
..+.-.++. .++.+|.-+-|.-.
T Consensus 202 p~sDyelis---------Al~~~l~G~~~~~~ 224 (429)
T COG1029 202 PNSDYELIS---------ALRAALHGKEPHRS 224 (429)
T ss_pred CCCCHHHHH---------HHHHHHCCCCCCCC
T ss_conf 998679999---------99998558999872
No 40
>cd04392 RhoGAP_ARHGAP19 RhoGAP_ARHGAP19: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of ArhGAP19-like proteins. The function of ArhGAP19 is unknown. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when GDP-bound. The Rho family of GTPases activates effectors involved in a wide variety of developmental processes, including regulation of cytoskeleton formation, cell proliferation and the JNK signaling pathway. GTPases generally have a low intrinsic GTPase hydrolytic activity but there are family-specific groups of GAPs that enhance the rate of GTP hydrolysis by several orders of magnitude.
Probab=27.27 E-value=38 Score=13.44 Aligned_cols=30 Identities=20% Similarity=0.396 Sum_probs=24.5
Q ss_pred CCCCCHHHCCHHHHHHHHHHCCCCCCCCEE
Q ss_conf 743311214899999999837987203558
Q gi|254781161|r 4 NPLANTIVTSIDDLVQHIASGIKPQEEFRI 33 (457)
Q Consensus 4 ~~~~~~~~~~~~~l~~~f~~g~k~~~~~~I 33 (457)
.|+++.-++-+.++++|++.|....|.+|+
T Consensus 3 ~~~~~~~~~~i~~~I~~le~~l~~EGIFRv 32 (208)
T cd04392 3 APLTEEGIAQIYQLIEYLEKNLRVEGLFRK 32 (208)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCEEC
T ss_conf 987676899999999999838997284127
No 41
>COG0441 ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=22.25 E-value=47 Score=12.86 Aligned_cols=64 Identities=17% Similarity=0.301 Sum_probs=36.7
Q ss_pred CCHHHHHHHHHHC--CCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHH------HHHHHHHHHHHCCCCEEE
Q ss_conf 4899999999837--987203558677765387476578487112234------999999755524886461
Q gi|254781161|r 12 TSIDDLVQHIASG--IKPQEEFRIGTEHESFIFSRADHRPLPYDGEKS------IVTILQAIQKKLAWKEIM 75 (457)
Q Consensus 12 ~~~~~l~~~f~~g--~k~~~~~~IG~E~E~flvd~~~~~p~~~~~~~~------i~~~L~~l~~~~~~~~~~ 75 (457)
.++.+|..|...- .+.+++.+||-|+++|.++.....=.++.-++| +++.+.......|+.++.
T Consensus 172 ~~~~~l~~~l~~~eea~krdHrklg~el~LF~~~~~~~~G~~~~~pkG~~ir~~le~y~~~~~~~~Gy~~V~ 243 (589)
T COG0441 172 ADKKELEAYLKRLEEAKKRDHRKLGKELDLFSFSPEEGPGLPFWHPKGATIRNLLEDYVRTKLRSYGYQEVK 243 (589)
T ss_pred CCHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCEEEC
T ss_conf 788999999766665027864768776214341444588506987884669999999999898755852712
No 42
>cd01979 Pchlide_reductase_N Pchlide_reductase_N: N protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=20.32 E-value=35 Score=13.63 Aligned_cols=84 Identities=17% Similarity=0.177 Sum_probs=36.9
Q ss_pred CHHHHHHHHHHHHHHHHHCCC----CEEECCCCEECCCCCCCCCCEEECCC-CCEEEECCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 711223499999975552488----64612784102334568870341354-2024201101015677888888788878
Q gi|254781161|r 51 PYDGEKSIVTILQAIQKKLAW----KEIMDKGNIIGLANPLSKAGISIEPG-GQLELSTTTLQNVHQIKGEILGYIQILK 125 (457)
Q Consensus 51 ~~~~~~~i~~~L~~l~~~~~~----~~~~~~~~~~~l~~~~~~~~it~ep~-~qlE~s~~~~~~~~e~~~~~~~~~~~l~ 125 (457)
.+=+.-+|..+..++.|.|+- ..... +.-+-.|.-|..||- +.-++.-.-...+.+.++++ .+.+.
T Consensus 10 ~fc~lt~i~wl~~kI~DaffLVvG~~tCah------~~q~a~GvmifaepRf~ta~leE~Dl~~~~~~~~eL---~r~v~ 80 (396)
T cd01979 10 TFCGLACVAWLYQKIEDSFFLVVGTKTCAH------FLQNALGVMIFAEPRFAMAELEEGDLSALLNDYAEL---DRVVT 80 (396)
T ss_pred CCCCHHHHHHHHHHHCCCCEEEECCCHHHH------HHHHHHCCEEECCCCCCCCCCCCHHHHHCCCCHHHH---HHHHH
T ss_conf 255236399999863310036433750676------766410245435743222304620554236966999---99999
Q ss_pred HHHHHCC-CCEECCCCCCC
Q ss_conf 7421038-73421056878
Q gi|254781161|r 126 EITQNLD-LGILGMGFNPK 143 (457)
Q Consensus 126 ~il~~~~-~~~~~~g~~P~ 143 (457)
++..+.+ ..+.-.|+=|.
T Consensus 81 ~i~~~r~p~~iFlvgtCps 99 (396)
T cd01979 81 QIKRDRNPSVIFLIGSCTT 99 (396)
T ss_pred HHHHHCCCCEEEEECCCCH
T ss_conf 9997489947999725857
Done!