HHsearch alignment for GI: 254781161 and conserved domain: pfam12224
>pfam12224 Amidoligase_2 Putative amidoligase enzyme. This family of proteins are likely to act as amidoligase enzymes Protein in this family are found in conserved gene neighborhoods encoding a glutamine amidotransferase-like thiol peptidase (in proteobacteria) or an Aig2 family cyclotransferase protein (in firmicutes).
Probab=97.86 E-value=0.00038 Score=43.83 Aligned_cols=56 Identities=11% Similarity=0.203 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC--C--HHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 356666654321126788876313404751478--9--8899999999987656788874378
Q gi|254781161|r 156 RYVLMKKYMPQVGTHGLDMMFRTCTTQVSLDFS--S--EHDMATKLRVSFKLQPLATAIFASS 214 (457)
Q Consensus 156 Ry~~m~~~~~~~g~~~~~mm~~tas~Qv~id~~--~--~~d~~~~~n~a~~l~P~llAL~aNS 214 (457)
T Consensus 89 ~l~~l~~~Lr~~ga~~t---n~scG~hVHin~~~~~~~~~~l~~~~~~~~~~e~~l~~~~~vd 148 (250)
T pfam12224 89 QLQELVRALRRAGAKGT---NASCGFHVHINAEPPDLTAQTLRNLLQAYALLEDWLRKALPVD 148 (250)
T ss_pred HHHHHHHHHHHCCCCCC---CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999998288346---7754777871575678898999999999999999999855877