HHsearch alignment for GI: 254781162 and conserved domain: TIGR03244
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=96.48 E-value=0.021 Score=33.99 Aligned_cols=116 Identities=17% Similarity=0.186 Sum_probs=70.1
Q ss_pred EEEECCHHHHHHHHHHHC--CCCCC---------------CCEEEEEECCCCCCCCEEEEEEE--CCEEEEEEEEEEE--
Q ss_conf 442079899999999853--89872---------------10013110388887607899998--8989999998776--
Q gi|254781162|r 35 LERLEHDSSICAMHADSF--GPGRF---------------VRAAVLLREQGMHDLSLSFLCAE--GKRIVGSVRMTPI-- 93 (192)
Q Consensus 35 ~~R~e~~~di~ai~~~~f--gpgr~---------------~~~~~~lR~~~~~~~~lslVA~~--~~~IVG~i~~~pv-- 93 (192)
T Consensus 1 vvRpv~~~Dl~~l~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sf~~-~~~~~~~~YlFVLEd~~~g~vvGts~I~a~vG 79 (336)
T TIGR03244 1 IVRPVETSDLDALYQLAQSTGIGLTSLPANEDLLSARIERAEKTFSG-ELTRAEQGYLFVLEDTETGTVAGVSAIEAAVG 79 (336)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CCCCCCCEEEEEEEECCCCEEEEEEEEEECCC
T ss_conf 94437422099999999973998655999999999999999998658-78877631899998778993999874675225
Q ss_pred --------EEC----------------------C-CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHH---HHCCCCEEEE
Q ss_conf --------118----------------------8-22389976788511138995899999999999---6138847998
Q gi|254781162|r 94 --------SIE----------------------K-ITGHLLGPIVVHPLYQNKGIGRKLISMSVDAA---EKKGSQVIVL 139 (192)
Q Consensus 94 --------~~~----------------------~-~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a---~~~g~~~v~l 139 (192)
T Consensus 80 ~~~Pfy~yr~~~~~~~S~~L~~~~~~~~L~l~~d~tg~sEl~tLfl~p~~R~~~~G~lLS~~RfLFia~~~erF~~~viA 159 (336)
T TIGR03244 80 LEEPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGGNGRLLSKSRFLFIAQFRERFSKKIIA 159 (336)
T ss_pred CCCCCEEEEECCEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 89887889967556624457975311159987377687268999978898278723589999999998717651214220
Q ss_pred --------EECHHHHHHCCC
Q ss_conf --------408657874294
Q gi|254781162|r 140 --------VGDIAYYSKLGF 151 (192)
Q Consensus 140 --------~g~~~yY~rfGF 151 (192)
T Consensus 160 EmRG~~d~~G~SPFW~~lg~ 179 (336)
T TIGR03244 160 EMRGVSDEQGRSPFWNALGR 179 (336)
T ss_pred HHCCCCCCCCCCCCHHHHHC
T ss_conf 20585489999831777624