HHsearch alignment for GI: 254781162 and conserved domain: TIGR03245
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=96.94 E-value=0.011 Score=35.70 Aligned_cols=117 Identities=12% Similarity=0.149 Sum_probs=71.1
Q ss_pred EEEECCHHHHHHHHHHHC--CCCCCC---------------CEEEEEECCCCCCCCEEEEEEE--CCEEEEEEEEEEE--
Q ss_conf 442079899999999853--898721---------------0013110388887607899998--8989999998776--
Q gi|254781162|r 35 LERLEHDSSICAMHADSF--GPGRFV---------------RAAVLLREQGMHDLSLSFLCAE--GKRIVGSVRMTPI-- 93 (192)
Q Consensus 35 ~~R~e~~~di~ai~~~~f--gpgr~~---------------~~~~~lR~~~~~~~~lslVA~~--~~~IVG~i~~~pv-- 93 (192)
T Consensus 1 vvRpv~~~Dl~~l~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sf~~~~~~~~~e~YlFVLEd~~tg~vvG~s~I~a~vG 80 (336)
T TIGR03245 1 IVRPSRFADLPAIERLANESAIGVTSLPADRAKLGEKIAQSERSFAAEVSFVGEERYLFVLEDTETGKLLGTSSIVASAG 80 (336)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEC
T ss_conf 94447411199999999973999655999999999999999998635567888740899998568891899874786104
Q ss_pred --------EEC----------------------C-CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHH---HHCCCCEEEE
Q ss_conf --------118----------------------8-22389976788511138995899999999999---6138847998
Q gi|254781162|r 94 --------SIE----------------------K-ITGHLLGPIVVHPLYQNKGIGRKLISMSVDAA---EKKGSQVIVL 139 (192)
Q Consensus 94 --------~~~----------------------~-~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a---~~~g~~~v~l 139 (192)
T Consensus 81 ~~~Pfy~yr~~~~vh~S~~L~~~~~~~~L~l~~d~tG~sEl~tLfL~p~~R~~~~G~LLS~~RfLFmA~~~~rF~~~viA 160 (336)
T TIGR03245 81 YGEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAELLSRARLLFMAAHRERFQSRIIV 160 (336)
T ss_pred CCCCCEEEEECCEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHEE
T ss_conf 89872899926467525035974230059986168887057999978787478605689999999998717661203103
Q ss_pred --------EECHHHHHHCCC
Q ss_conf --------408657874294
Q gi|254781162|r 140 --------VGDIAYYSKLGF 151 (192)
Q Consensus 140 --------~g~~~yY~rfGF 151 (192)
T Consensus 161 EmRG~~d~~G~SPFW~~lg~ 180 (336)
T TIGR03245 161 EIQGVQDDNGDSPFWDAIGR 180 (336)
T ss_pred HHCCCCCCCCCCCCHHHHHC
T ss_conf 00585489999830787635