Query         gi|254781162|ref|YP_003065575.1| GCN5-related N-acetyltransferase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 192
No_of_seqs    206 out of 1693
Neff          5.8 
Searched_HMMs 39220
Date          Mon May 30 05:40:29 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254781162.hhm -d /home/congqian_1/database/cdd/Cdd.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 COG3153 Predicted acetyltransf 100.0 1.4E-41       0  263.3  15.0  160   32-191     2-166 (171)
  2 PRK03624 putative acetyltransf  99.7 4.1E-17 1.1E-21  120.0  12.8  120   33-156     2-130 (140)
  3 PRK07757 acetyltransferase; Pr  99.7 2.3E-17 5.9E-22  121.5  10.9  123   34-159     2-125 (152)
  4 PRK09491 rimI ribosomal-protei  99.7 6.9E-16 1.8E-20  112.9  12.3  133   35-175     1-144 (144)
  5 PTZ00330 acetyltransferase; Pr  99.6 5.1E-15 1.3E-19  107.8  13.1  126   30-155     3-140 (147)
  6 PRK07922 N-acetylglutamate syn  99.6 1.3E-15 3.3E-20  111.3   9.5  127   30-159     3-131 (170)
  7 PRK10146 aminoalkylphosphonic   99.6 1.1E-14 2.8E-19  105.8  13.2  126   33-160     3-141 (144)
  8 TIGR01575 rimI ribosomal-prote  99.6 8.6E-15 2.2E-19  106.5  11.0  129   41-171     2-140 (140)
  9 PRK10140 putative acetyltransf  99.6 3.1E-14 7.8E-19  103.2  12.5  123   32-156     2-141 (162)
 10 PRK05279 N-acetylglutamate syn  99.5 1.4E-13 3.7E-18   99.3   9.2  123   35-159   296-420 (441)
 11 cd04301 GNAT GCN5-related N-ac  99.5 5.8E-13 1.5E-17   95.8  10.2   76   76-152     2-83  (83)
 12 PRK01346 hypothetical protein;  99.5 8.8E-13 2.2E-17   94.7  10.7  123   32-156     5-136 (411)
 13 COG1246 ArgA N-acetylglutamate  99.4 2.6E-13 6.7E-18   97.8   6.7  120   34-159     1-126 (153)
 14 PRK10975 TDP-fucosamine acetyl  99.4 3.6E-12 9.2E-17   91.1  11.1  120   34-157    83-225 (231)
 15 KOG3139 consensus               99.4 5.6E-12 1.4E-16   90.0  11.3  111   42-156    28-146 (165)
 16 PRK12308 bifunctional arginino  99.4 1.3E-13 3.3E-18   99.5   2.7  121   32-159   462-587 (614)
 17 PRK09831 hypothetical protein;  99.3 4.1E-12   1E-16   90.8   7.8  128   34-174     1-144 (147)
 18 PRK10314 hypothetical protein;  99.3   2E-11 5.1E-16   86.8  10.9  130   41-176    17-151 (153)
 19 pfam00583 Acetyltransf_1 Acety  99.3 1.2E-11   3E-16   88.1   9.2   74   78-152     1-80  (80)
 20 PRK10562 hypothetical protein;  99.3   8E-12   2E-16   89.1   8.0  126   35-172     1-139 (145)
 21 TIGR03448 mycothiol_MshD mycot  99.2 3.6E-10 9.3E-15   79.4  12.9  123   33-156   149-288 (292)
 22 COG0456 RimI Acetyltransferase  99.2 9.1E-11 2.3E-15   82.9   9.0  143   28-172     6-170 (177)
 23 TIGR03103 trio_acet_GNAT GNAT-  99.2   2E-10   5E-15   81.0  10.6  146   27-173    77-234 (547)
 24 PRK10514 hypothetical protein;  99.2   1E-10 2.6E-15   82.7   8.8  115   34-160     2-130 (146)
 25 COG2153 ElaA Predicted acyltra  99.2 1.4E-10 3.5E-15   81.9   8.9   96   76-175    52-152 (155)
 26 COG1247 Sortase and related ac  99.0 1.2E-08 3.2E-13   70.4  13.3  126   33-158     1-145 (169)
 27 KOG3397 consensus               99.0 2.6E-09 6.5E-14   74.4   7.8  117   36-155    20-140 (225)
 28 KOG3216 consensus               98.9 2.2E-08 5.5E-13   69.0  11.6  123   32-156     2-146 (163)
 29 TIGR01890 N-Ac-Glu-synth amino  98.9 1.4E-09 3.6E-14   75.9   3.7  122   33-159   291-417 (439)
 30 pfam08445 FR47 FR47-like prote  98.9 1.4E-08 3.6E-13   70.1   8.8   74   76-156     4-82  (86)
 31 TIGR03448 mycothiol_MshD mycot  98.8 1.3E-07 3.3E-12   64.5  11.6  133   40-178    10-158 (292)
 32 COG4552 Eis Predicted acetyltr  98.7 3.7E-08 9.4E-13   67.6   5.6  120   52-175    21-145 (389)
 33 KOG2488 consensus               98.5   8E-07   2E-11   59.8   8.2   81   76-156    95-182 (202)
 34 KOG4144 consensus               98.5 6.8E-08 1.7E-12   66.1   2.1  124   35-160    13-165 (190)
 35 COG3393 Predicted acetyltransf  98.4 1.4E-06 3.5E-11   58.5   7.8   80   77-159   181-265 (268)
 36 KOG3396 consensus               98.3 3.8E-06 9.7E-11   55.9   8.2   81   74-155    54-143 (150)
 37 TIGR01211 ELP3 histone acetylt  98.3 1.7E-06 4.3E-11   57.9   5.4   98   59-156   441-567 (573)
 38 PRK10809 ribosomal-protein-S5-  98.2 6.8E-05 1.7E-09   48.5  13.3  121   34-155    18-165 (194)
 39 KOG3235 consensus               98.2 8.2E-06 2.1E-10   53.9   7.1  120   34-157     2-136 (193)
 40 COG1444 Predicted P-loop ATPas  98.1 7.3E-06 1.9E-10   54.2   6.4   80  100-180   531-615 (758)
 41 PRK10151 ribosomal-protein-L7/  98.1 4.1E-05 1.1E-09   49.8   9.8  122   32-155     9-154 (179)
 42 TIGR02406 ectoine_EctA L-2,4-d  98.1 1.2E-05   3E-10   53.0   6.6   80   74-154    40-130 (162)
 43 COG1670 RimL Acetyltransferase  98.0 0.00015 3.8E-09   46.6  11.3   86   72-158    65-160 (187)
 44 KOG3234 consensus               98.0   2E-05 5.1E-10   51.6   6.8  142   36-178     4-154 (173)
 45 TIGR03585 PseH pseudaminic aci  98.0 4.2E-05 1.1E-09   49.8   8.0   81   73-156    51-138 (156)
 46 KOG3138 consensus               98.0 1.5E-05 3.7E-10   52.5   5.5  142   34-179    17-176 (187)
 47 COG3981 Predicted acetyltransf  97.9 4.5E-05 1.1E-09   49.6   7.2   76   71-148    66-145 (174)
 48 cd02169 Citrate_lyase_ligase C  97.9 0.00011 2.8E-09   47.3   8.2   69   79-155    12-83  (296)
 49 COG2388 Predicted acetyltransf  97.8   7E-05 1.8E-09   48.5   6.9   67   72-141    14-80  (99)
 50 pfam00765 Autoind_synth Autoin  97.6  0.0021 5.3E-08   39.8  11.0  108   65-175    37-171 (182)
 51 PHA00673 acetyltransferase dom  97.5 0.00051 1.3E-08   43.4   7.3   83   73-155    55-145 (154)
 52 TIGR02382 wecD_rffC TDP-D-fuco  97.5 0.00014 3.6E-09   46.7   4.0  118   34-155    54-194 (201)
 53 COG1243 ELP3 Histone acetyltra  97.4  0.0002 5.2E-09   45.8   4.2   85   72-156   406-509 (515)
 54 COG3053 CitC Citrate lyase syn  97.4  0.0026 6.5E-08   39.3   9.6   76   72-155    35-114 (352)
 55 pfam04958 AstA Arginine N-succ  97.0  0.0061 1.6E-07   37.1   8.1  118   34-151     1-182 (338)
 56 TIGR03245 arg_AOST_alph argini  96.9   0.011 2.7E-07   35.7   9.2  117   35-151     1-180 (336)
 57 PRK13688 hypothetical protein;  96.9 0.00076 1.9E-08   42.4   3.2   77   76-156    48-133 (157)
 58 COG0454 WecD Histone acetyltra  96.9  0.0006 1.5E-08   43.0   2.6   44  106-151    87-130 (156)
 59 PRK00756 acyltransferase NodA;  96.9  0.0066 1.7E-07   36.9   7.6  112   38-150    17-137 (196)
 60 PRK10456 arginine succinyltran  96.7   0.012   3E-07   35.4   7.6  117   34-151     2-181 (344)
 61 PRK13834 putative autoinducer   96.5   0.032 8.2E-07   32.9   9.1  109   72-183    52-191 (207)
 62 TIGR03244 arg_catab_AstA argin  96.5   0.021 5.3E-07   34.0   7.9  116   35-151     1-179 (336)
 63 pfam02474 NodA Nodulation prot  96.4   0.011 2.9E-07   35.5   6.3  113   38-151    17-138 (196)
 64 TIGR03243 arg_catab_AOST argin  96.3   0.029 7.3E-07   33.2   7.6  150   35-187     1-226 (335)
 65 COG3818 Predicted acetyltransf  96.0  0.0053 1.3E-07   37.5   2.7   84   76-159    48-151 (167)
 66 KOG2535 consensus               95.8   0.015 3.7E-07   34.9   4.3   77   80-156   450-547 (554)
 67 PHA01807 hypothetical protein   95.5   0.086 2.2E-06   30.4   7.4   69   71-140    48-118 (145)
 68 COG3375 Uncharacterized conser  95.4   0.089 2.3E-06   30.3   7.1  104   36-142     6-116 (266)
 69 pfam08444 Gly_acyl_tr_C Aralky  95.3   0.042 1.1E-06   32.2   5.2   54  103-156    22-80  (89)
 70 COG2401 ABC-type ATPase fused   95.2   0.015 3.7E-07   34.9   2.7   55  101-155   242-307 (593)
 71 pfam01853 MOZ_SAS MOZ/SAS fami  94.3    0.09 2.3E-06   30.3   4.9   60   72-134    51-114 (189)
 72 COG3916 LasI N-acyl-L-homoseri  93.5    0.59 1.5E-05   25.5  10.3  119   37-155    10-162 (209)
 73 COG5628 Predicted acetyltransf  93.0    0.44 1.1E-05   26.2   6.5   75   76-152    40-119 (143)
 74 KOG3698 consensus               93.0     0.7 1.8E-05   25.1   7.5  149    7-155   653-877 (891)
 75 PTZ00064 histone acetyltransfe  92.8    0.24 6.1E-06   27.8   4.9   59   71-134   268-330 (442)
 76 pfam01233 NMT Myristoyl-CoA:pr  92.7    0.77   2E-05   24.8   7.5  100   39-138    32-148 (162)
 77 pfam09390 DUF1999 Protein of u  92.7    0.39 9.9E-06   26.5   5.9  121   34-155     1-140 (161)
 78 KOG2747 consensus               92.5    0.43 1.1E-05   26.3   5.9   61   71-134   232-294 (396)
 79 KOG4135 consensus               92.2    0.58 1.5E-05   25.5   6.2   94   64-157    57-171 (185)
 80 TIGR01686 FkbH FkbH domain; In  90.8    0.65 1.7E-05   25.2   5.3  124   26-153   190-335 (337)
 81 KOG2779 consensus               90.3    0.54 1.4E-05   25.7   4.5   99   37-135    87-202 (421)
 82 COG3882 FkbH Predicted enzyme   89.9    0.78   2E-05   24.8   5.1  124   28-155   408-549 (574)
 83 COG3138 AstA Arginine/ornithin  89.0     1.1 2.9E-05   23.9   5.3   90   34-124     2-143 (336)
 84 TIGR00124 cit_ly_ligase [citra  87.7     2.2 5.5E-05   22.2   8.3   80   69-156    28-113 (342)
 85 pfam06852 DUF1248 Protein of u  87.6     2.2 5.6E-05   22.1   6.6   90   64-153    37-134 (180)
 86 COG5653 Protein involved in ce  86.4     2.6 6.6E-05   21.7   7.0   84   75-162   274-358 (406)
 87 COG5027 SAS2 Histone acetyltra  85.4    0.51 1.3E-05   25.8   1.9   58   71-131   232-293 (395)
 88 pfam05301 Mec-17 Touch recepto  83.5     1.4 3.5E-05   23.3   3.4   51   82-132    18-78  (120)
 89 KOG2036 consensus               82.4     1.4 3.6E-05   23.3   3.1   77  102-178   616-747 (1011)
 90 KOG2696 consensus               82.2     2.2 5.6E-05   22.1   4.0   41  103-143   220-260 (403)
 91 TIGR03019 pepcterm_femAB FemAB  81.6     4.1 0.00011   20.5   9.4   90   63-156   186-281 (330)
 92 PRK01305 arginyl-tRNA-protein   78.2     5.3 0.00014   19.9   8.2   68   66-139   137-206 (241)
 93 COG5092 NMT1 N-myristoyl trans  77.9     5.5 0.00014   19.8   6.7   80   56-135   112-200 (451)
 94 pfam04377 ATE_C Arginine-tRNA-  75.8     6.3 0.00016   19.5   8.2   65   69-139    35-101 (128)
 95 COG4671 Predicted glycosyl tra  56.2      15 0.00037   17.3   3.4   29  113-141   227-258 (400)
 96 KOG4601 consensus               55.4      13 0.00034   17.6   3.1   49   82-130    81-138 (264)
 97 pfam02388 FemAB FemAB family.   54.2      17 0.00043   16.9  10.1   71  104-178    70-160 (407)
 98 PRK12568 glycogen branching en  52.4      16 0.00042   17.0   3.2   48  119-166   269-318 (730)
 99 TIGR02482 PFKA_ATP 6-phosphofr  52.2      18 0.00046   16.8   3.4   39  123-166    81-126 (302)
100 TIGR00542 hxl6Piso_put hexulos  51.7      15 0.00037   17.3   2.8   37  117-153    91-127 (290)
101 PRK05402 glycogen branching en  48.8      21 0.00053   16.4   3.2   46  118-163   269-316 (730)
102 cd03173 DUF619-like DUF619-lik  47.5      22 0.00056   16.3   5.6   49   78-128    14-62  (99)
103 COG3623 SgaU Putative L-xylulo  46.2      16 0.00042   17.0   2.4   33  118-150    94-126 (287)
104 TIGR02089 TTC tartrate dehydro  45.5      23  0.0006   16.1   3.4   14  114-127    11-24  (355)
105 TIGR00455 apsK adenylylsulfate  42.8      24  0.0006   16.1   2.7   39  116-154    29-71  (187)
106 TIGR02362 dhaK1b probable dihy  40.7      21 0.00053   16.5   2.2   47  106-152   134-189 (328)
107 COG2921 Uncharacterized conser  37.8      31 0.00079   15.4   3.7   43    8-50     36-79  (90)
108 PRK12313 glycogen branching en  36.8      32 0.00082   15.3   3.2   44  119-162   169-214 (632)
109 cd04266 DUF619-NAGS-FABP DUF61  36.1      33 0.00084   15.3   6.7   55   74-128    11-68  (108)
110 TIGR01490 HAD-SF-IB-hyp1 HAD-s  35.3      34 0.00087   15.2   3.7   35  122-156    94-133 (204)
111 PRK09936 hypothetical protein;  34.7      35 0.00089   15.1   3.6   33  118-150    70-103 (294)
112 PRK09331 Sep-tRNA:Cys-tRNA syn  33.8      15 0.00037   17.3   0.5   42  104-145   124-168 (386)
113 PRK13210 putative L-xylulose 5  32.8      20  0.0005   16.6   1.0   32  108-141    84-115 (284)
114 pfam06559 DCD 2'-deoxycytidine  32.1      38 0.00098   14.9   4.4   51   58-117   308-358 (366)
115 PRK07559 2'-deoxycytidine 5'-t  31.8      39   0.001   14.8   4.7   36   79-117   323-358 (366)
116 TIGR02277 PaaX_trns_reg phenyl  31.1      29 0.00073   15.6   1.6   73  100-174    17-94  (287)
117 PRK13876 conjugal transfer cou  30.9      39 0.00099   14.8   2.3   12  107-118   149-160 (662)
118 cd04265 DUF619-NAGS-U DUF619-N  29.0      44  0.0011   14.6   3.4   30  100-129    30-59  (95)
119 COG2243 CobF Precorrin-2 methy  27.8      46  0.0012   14.4   2.7   21  132-152    89-110 (234)
120 cd04736 MDH_FMN Mandelate dehy  27.0      47  0.0012   14.3   2.7   28  120-147   128-155 (361)
121 PRK05576 cobalt-precorrin-2 C(  26.5      48  0.0012   14.3   2.1   11  141-151    99-109 (224)
122 pfam04765 DUF616 Protein of un  25.4      38 0.00096   14.9   1.4   57  121-177   196-252 (306)
123 cd02922 FCB2_FMN Flavocytochro  24.8      52  0.0013   14.1   3.3   38  119-156   130-173 (344)
124 pfam09924 DUF2156 Uncharacteri  23.3      56  0.0014   13.9   8.6   55   75-132   181-235 (250)
125 pfam02457 DisA_N DisA bacteria  22.8      50  0.0013   14.2   1.6   48   76-139    59-106 (122)
126 COG0434 SgcQ Predicted TIM-bar  22.7      46  0.0012   14.4   1.4   19  133-151    47-67  (263)
127 pfam09837 DUF2064 Uncharacteri  22.0      59  0.0015   13.8   3.2   71  103-176    32-107 (121)
128 pfam06849 DUF1246 Protein of u  22.0      59  0.0015   13.8   2.7   29  124-152    11-41  (124)
129 TIGR02665 molyb_mobA molybdopt  21.1      51  0.0013   14.1   1.4   47  118-164    26-78  (202)
130 TIGR02708 L_lactate_ox L-lacta  20.8      63  0.0016   13.6   2.4   45  123-169   149-195 (368)
131 pfam01276 OKR_DC_1 Orn/Lys/Arg  20.3      59  0.0015   13.8   1.6   23  141-163   202-224 (417)

No 1  
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=100.00  E-value=1.4e-41  Score=263.28  Aligned_cols=160  Identities=33%  Similarity=0.576  Sum_probs=152.5

Q ss_pred             CEEEEEECCHHHHHHHH---HHHCCCCCCCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEEC--CCCEEEEEEE
Q ss_conf             20344207989999999---985389872100131103888876078999988989999998776118--8223899767
Q gi|254781162|r   32 AFFLERLEHDSSICAMH---ADSFGPGRFVRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPISIE--KITGHLLGPI  106 (192)
Q Consensus        32 ~~~~~R~e~~~di~ai~---~~~fgpgr~~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~~--~~~~~~Lgpl  106 (192)
                      ++|.||+|+.+|+.+|.   +.+|+++++++.+..+|+...++.+|||||+++|++||||+|||+.++  ...++.||||
T Consensus         2 ~~~~ir~e~~~d~~~i~~~~~~aF~~~~e~~~v~~lR~~~~~~~~LslVA~d~g~vvG~Il~s~v~~~g~~~~~~~LaPL   81 (171)
T COG3153           2 MMMLIRTETPADIPAIEALTREAFGPGREAKLVDKLREGGRPDLTLSLVAEDDGEVVGHILFSPVTVGGEELGWLGLAPL   81 (171)
T ss_pred             CCCEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEEEEEEEEECCCCCCEEEEEEE
T ss_conf             84278746834389999999987404368999999874677655336998209989999998689856864146999767


Q ss_pred             EECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHCCCEECCCCCEECCCCCCHHHEEEEECCCCCCCCCEEE
Q ss_conf             88511138995899999999999613884799840865787429487463653668999956669843577810178167
Q gi|254781162|r  107 VVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGDIAYYSKLGFQAVPWKSLILPAPVDPNRVLFLPLVQNVAQNIKGI  186 (192)
Q Consensus       107 aV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~~~yY~rfGF~~~~~~~l~~p~pv~~~~~l~l~L~~~~l~~~~G~  186 (192)
                      +|+|+|||||||++||+.+++.++.+|+..|+++|+|+||.||||++++..++.+|+|+++++||+++|.++.+++.+|+
T Consensus        82 aV~p~~qg~GIG~~Lvr~~le~a~~~G~~~v~vlGdp~YY~rfGF~~~~~~~l~~p~~~~~~~fl~~~L~~~~l~~~~G~  161 (171)
T COG3153          82 AVDPEYQGQGIGSALVREGLEALRLAGASAVVVLGDPTYYSRFGFEPAAGAKLYAPGPVPDERFLALELGDGALEGPSGT  161 (171)
T ss_pred             EECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCE
T ss_conf             87622157867899999999999977997899906844244547488655531168998974089998458755677633


Q ss_pred             EEEEE
Q ss_conf             79832
Q gi|254781162|r  187 VRCRE  191 (192)
Q Consensus       187 v~~~~  191 (192)
                      |.+.+
T Consensus       162 v~~~~  166 (171)
T COG3153         162 VHYHE  166 (171)
T ss_pred             EEECC
T ss_conf             88553


No 2  
>PRK03624 putative acetyltransferase; Provisional
Probab=99.74  E-value=4.1e-17  Score=120.04  Aligned_cols=120  Identities=23%  Similarity=0.306  Sum_probs=89.8

Q ss_pred             EEEEEECCHHHHHHHHHH---HCCCCCCCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEEEC
Q ss_conf             034420798999999998---53898721001311038888760789999889899999987761188223899767885
Q gi|254781162|r   33 FFLERLEHDSSICAMHAD---SFGPGRFVRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVH  109 (192)
Q Consensus        33 ~~~~R~e~~~di~ai~~~---~fgpgr~~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~  109 (192)
                      .|.||+-+.+|++++.++   ++.+.-...+.............+.|||+.+|+|||++..+.   ++..++ +..++|+
T Consensus         2 ~m~IR~~~~~D~~av~~L~~~~~~~~pw~~~~~~~~~~l~~~~~~~lVae~~g~ivG~~~~~~---~~~~~~-i~~laV~   77 (140)
T PRK03624          2 AMEIRVFRQADFEAVIALWERCDLTRPWNDPEMDIERKLAHDPSLFLVAEVGGRVVGTVMGGY---DGHRGW-LYYLAVH   77 (140)
T ss_pred             CEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCEEEEEEEEEE---ECCEEE-EEEEEEC
T ss_conf             619985999999999999996499999886399999998479978999999999999999998---177899-9998888


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE---C---HHHHHHCCCEECCC
Q ss_conf             11138995899999999999613884799840---8---65787429487463
Q gi|254781162|r  110 PLYQNKGIGRKLISMSVDAAEKKGSQVIVLVG---D---IAYYSKLGFQAVPW  156 (192)
Q Consensus       110 P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g---~---~~yY~rfGF~~~~~  156 (192)
                      |+|||+|||++||+++++.+++.|+..+.|.-   +   ..||+++||+....
T Consensus        78 p~~Rg~GiG~~Ll~~~~~~~~~~G~~~i~L~v~~~N~~A~~fY~~~GF~~~~r  130 (140)
T PRK03624         78 PDFRGRGIGRALLAHAEKKLIARGCPKINLQVREDNDAVLGFYEALGYEEEDR  130 (140)
T ss_pred             HHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCEECCE
T ss_conf             76765389999999999999976999999999088599999999889938328


No 3  
>PRK07757 acetyltransferase; Provisional
Probab=99.74  E-value=2.3e-17  Score=121.51  Aligned_cols=123  Identities=20%  Similarity=0.258  Sum_probs=92.8

Q ss_pred             EEEEECCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCC
Q ss_conf             34420798999999998538987210013110388887607899998898999999877611882238997678851113
Q gi|254781162|r   34 FLERLEHDSSICAMHADSFGPGRFVRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQ  113 (192)
Q Consensus        34 ~~~R~e~~~di~ai~~~~fgpgr~~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~r  113 (192)
                      |.||..+..|+.+|+++.-..-+.....-|-++.-.....--+||+.||+|||++.+.+.   +.+...+..++|+|+||
T Consensus         2 ~~IR~A~~~Dv~~I~~Li~~~~~~g~Ll~Rs~~~i~~~i~~f~Vae~dg~IvGc~aL~~~---~~~~aEi~~l~V~p~~r   78 (152)
T PRK07757          2 MMIRKARLSDVKAIHALINEYAKEGLMLPRSLDELYENIRDFYVAEEDGEIVGCCALHIL---WEDLAEIRSLAVSEEYR   78 (152)
T ss_pred             CEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEEEECCEEEEEEEEEEC---CCCCEEEEEEEECHHHC
T ss_conf             189859788899999999888768945268999999764749999999999999998977---99911067789837662


Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCEEEEEE-CHHHHHHCCCEECCCCCE
Q ss_conf             8995899999999999613884799840-865787429487463653
Q gi|254781162|r  114 NKGIGRKLISMSVDAAEKKGSQVIVLVG-DIAYYSKLGFQAVPWKSL  159 (192)
Q Consensus       114 g~GiG~~Li~~~l~~a~~~g~~~v~l~g-~~~yY~rfGF~~~~~~~l  159 (192)
                      |+|+|++|++++++.|+++|+..++++. .++||.+.||+.++...+
T Consensus        79 g~GiG~~Ll~~l~~~Ar~~G~~~lf~LTt~~~fF~~~GF~~~~~~~l  125 (152)
T PRK07757         79 GKGIGRMLVEACLEEARELGVKRVFALTYQPEFFEKLGFREVDKEAL  125 (152)
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCEECCHHHC
T ss_conf             88889999999999999869999999058667898789988883559


No 4  
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.69  E-value=6.9e-16  Score=112.90  Aligned_cols=133  Identities=20%  Similarity=0.310  Sum_probs=98.2

Q ss_pred             EEEECCHHH---HHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEEECCC
Q ss_conf             442079899---99999985389872100131103888876078999988989999998776118822389976788511
Q gi|254781162|r   35 LERLEHDSS---ICAMHADSFGPGRFVRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPL  111 (192)
Q Consensus        35 ~~R~e~~~d---i~ai~~~~fgpgr~~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~  111 (192)
                      +||+=+.+|   |-+|+..+|.. -.++..+..-.   ....+++|+..+++|||++.++.+.   .++..+ .++|+|+
T Consensus         1 TIr~mt~~Dl~~v~~IE~~~f~~-PWs~~~f~~~~---~~~~~~~~~~~~~~ivGy~~~~~~~---de~~i~-~iaV~p~   72 (144)
T PRK09491          1 TISSLTTTDLPAAYHIEQRAHAF-PWSEKTFASNQ---GERYLNLKLTQNGQMAAFAITQVVL---DEATLF-NIAVDPD   72 (144)
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCC-CCCHHHHHHHH---HCCCEEEEEEECCEEEEEEEEEEEC---CCEEEE-EEEECHH
T ss_conf             93229899999999999986489-99999999775---5691799999899899999999817---918999-9999688


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCEEEEE------ECHHHHHHCCCEECCCCCEECCCC--CCHHHEEEEEC
Q ss_conf             13899589999999999961388479984------086578742948746365366899--99566698435
Q gi|254781162|r  112 YQNKGIGRKLISMSVDAAEKKGSQVIVLV------GDIAYYSKLGFQAVPWKSLILPAP--VDPNRVLFLPL  175 (192)
Q Consensus       112 ~rg~GiG~~Li~~~l~~a~~~g~~~v~l~------g~~~yY~rfGF~~~~~~~l~~p~p--v~~~~~l~l~L  175 (192)
                      |||+|+|++||++.++.++..|...+.|-      .+..+|+++||+.+....=..|.|  -.+.-+|.++|
T Consensus        73 ~r~~G~g~~Ll~~~~~~~~~~g~~~i~LEVr~sN~~A~~lY~k~GF~~~g~R~~YY~~~dg~EDAiiM~l~L  144 (144)
T PRK09491         73 YQRQGLGRALLEHLIDELEKRGVATLWLEVRASNAAAIALYESLGFNEVTIRRNYYPTADGREDAIIMALPL  144 (144)
T ss_pred             HHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCEEECEECCCCCCCCCCCCCEEEECCC
T ss_conf             864897999999999999987997999999578789999999889989178878568978990216886279


No 5  
>PTZ00330 acetyltransferase; Provisional
Probab=99.65  E-value=5.1e-15  Score=107.79  Aligned_cols=126  Identities=23%  Similarity=0.320  Sum_probs=92.3

Q ss_pred             HCCEEEEEECCHHHHHHHHHHH----CCCCC--CCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEE--EE-EECCCCE
Q ss_conf             0120344207989999999985----38987--21001311038888760789999889899999987--76-1188223
Q gi|254781162|r   30 IGAFFLERLEHDSSICAMHADS----FGPGR--FVRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMT--PI-SIEKITG  100 (192)
Q Consensus        30 ~~~~~~~R~e~~~di~ai~~~~----fgpgr--~~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~--pv-~~~~~~~  100 (192)
                      +...|.||.-+.+|+.++.++-    -.|.-  .............+.....+||+.+++|||+..+.  |- .-++.+.
T Consensus         3 m~~tl~IR~a~~~Dl~~il~Ll~~L~~~~~~~~e~~~~~~~~~~~~~~~~~v~Vae~~g~iVg~~~l~i~~~~~~~g~~~   82 (147)
T PTZ00330          3 MSGSLELRDLEEGDLGSVLELLSHLTSAPALSQEELEQIAARRRLAGVVTRVFVHSPTQRIVGTASLFVEPKFTRGGKCV   82 (147)
T ss_pred             CCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEEEEEEEEEEECCCCE
T ss_conf             98878988598889999999999854389978899999999873479943999995299799999999992133179536


Q ss_pred             EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC---HHHHHHCCCEECC
Q ss_conf             899767885111389958999999999996138847998408---6578742948746
Q gi|254781162|r  101 HLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGD---IAYYSKLGFQAVP  155 (192)
Q Consensus       101 ~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~---~~yY~rfGF~~~~  155 (192)
                      ..+..|+|+|+|||+|||++||+++++.|+++|+..++|..+   .+||+++||+...
T Consensus        83 ~~iEdvvV~~~~RG~GiG~~L~~~l~~~a~~~gc~kv~L~~~~~~~~FY~k~Gf~~~~  140 (147)
T PTZ00330         83 GHIEDVVVDPSYRGQGLGRALISDLCEIARSSGCYKVILDCTEDMVAFYKKLGFRACE  140 (147)
T ss_pred             EEEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCEECC
T ss_conf             9998899987765888899999999999998799799994795167999986999742


No 6  
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.64  E-value=1.3e-15  Score=111.32  Aligned_cols=127  Identities=11%  Similarity=0.140  Sum_probs=93.1

Q ss_pred             HCCEEEEEECCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEE-CCEEEEEEEEEEEEECCCCEEEEEEEEE
Q ss_conf             012034420798999999998538987210013110388887607899998-8989999998776118822389976788
Q gi|254781162|r   30 IGAFFLERLEHDSSICAMHADSFGPGRFVRAAVLLREQGMHDLSLSFLCAE-GKRIVGSVRMTPISIEKITGHLLGPIVV  108 (192)
Q Consensus        30 ~~~~~~~R~e~~~di~ai~~~~fgpgr~~~~~~~lR~~~~~~~~lslVA~~-~~~IVG~i~~~pv~~~~~~~~~LgplaV  108 (192)
                      +...+++|..+.+|+.+|+++.-.-...-...-|-++.-.....--+|++. +|+|||++.+.+..   .+...+..++|
T Consensus         3 ~~~~v~IR~A~~~DV~~I~~LI~p~a~~G~LL~Rs~~~L~~~I~~F~Vae~~DG~IvGCaAL~~~~---~dlAEIrsLAV   79 (170)
T PRK07922          3 MAPGIVVRRARTSDVPAIKRLVDTYADGRILLEKNLVTLYEAVQEFWVAEHLDGEVVGCGALHVLW---EDLAEVRTVAV   79 (170)
T ss_pred             CCCCEEEECCCHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHCEEEEEEECCCCEEEEEEEEECC---CCHHHHEEEEE
T ss_conf             788628874967779999999999986895204899999987552899994599689999746456---53213044588


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE-CHHHHHHCCCEECCCCCE
Q ss_conf             511138995899999999999613884799840-865787429487463653
Q gi|254781162|r  109 HPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVG-DIAYYSKLGFQAVPWKSL  159 (192)
Q Consensus       109 ~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g-~~~yY~rfGF~~~~~~~l  159 (192)
                      +|+|||+|+|++|+++.++.|+++|...++++. .++|+.+.||..+.+..+
T Consensus        80 ~p~~rg~G~G~~Lv~~l~~~Ar~lGi~~vFvLT~~~~fF~k~GF~ev~k~~l  131 (170)
T PRK07922         80 DPAMRGHGVGHAIVERLLDVARELGLSRVFVLTFEVEFFARHGFVEIDGTPV  131 (170)
T ss_pred             CHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCEECCCCCC
T ss_conf             7878189849999999999999859986999978368999769987668849


No 7  
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.63  E-value=1.1e-14  Score=105.81  Aligned_cols=126  Identities=15%  Similarity=0.124  Sum_probs=91.0

Q ss_pred             EEEEEECCHHHHHHHHHHH--CCCCCCCCEEEE--EE-CCCCCCCCEEEEEEECCEEEEEEEEEEEE--ECCCCEEEEEE
Q ss_conf             0344207989999999985--389872100131--10-38888760789999889899999987761--18822389976
Q gi|254781162|r   33 FFLERLEHDSSICAMHADS--FGPGRFVRAAVL--LR-EQGMHDLSLSFLCAEGKRIVGSVRMTPIS--IEKITGHLLGP  105 (192)
Q Consensus        33 ~~~~R~e~~~di~ai~~~~--fgpgr~~~~~~~--lR-~~~~~~~~lslVA~~~~~IVG~i~~~pv~--~~~~~~~~Lgp  105 (192)
                      ...||+-+.+|+.|+.++.  .++.......++  .. ...++. ...+||+.+|+|||++.++-..  ..+.....+..
T Consensus         3 ~v~IR~At~~D~~ai~~Ll~eL~~~~~d~~~~~~~~~~~~~~p~-~~~~Vae~dG~vvG~~~l~~~~~l~~~~~~~~I~~   81 (144)
T PRK10146          3 ACELRPATQYDTDAVYALICELKQAEFDHQAFRVGFNANLRDPN-MRYHLALLDGEVVGMIGLHLQFHLHHVNWIGEIQE   81 (144)
T ss_pred             CCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC-CEEEEEEECCEEEEEEEEEEECCCCCCCCEEEEEE
T ss_conf             74405198888999999999864376787999999999854998-48999998997999999999635246883699999


Q ss_pred             EEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC------HHHHHHCCCEECCCCCEE
Q ss_conf             7885111389958999999999996138847998408------657874294874636536
Q gi|254781162|r  106 IVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGD------IAYYSKLGFQAVPWKSLI  160 (192)
Q Consensus       106 laV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~------~~yY~rfGF~~~~~~~l~  160 (192)
                      ++|+|++||+|||++||.++++.|+++|+..+.|..+      ..||+|.||+... ++++
T Consensus        82 l~V~~~~Rg~GiG~~Ll~~a~~~Ar~~G~~~~~L~s~~~r~~Ah~FY~r~Gf~~~~-~~F~  141 (144)
T PRK10146         82 LVVMPQARGLNVGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYLREGYEQSH-FRFT  141 (144)
T ss_pred             EEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCEEEC-CCEE
T ss_conf             99985641769999999999999998699189998499678999999986996335-4168


No 8  
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase; InterPro: IPR006464   Histone acetylation is carried out by a class of enzymes known as histone acetyltransferases (HATs), which catalyse the transfer of an acetyl group from acetyl-CoA to the lysine E-amino groups on the N-terminal tails of histones. Early indication that HATs were involved in transcription came from the observation that in actively transcribed regions of chromatin, histones tend to be hyperacetylated, whereas in transcriptionally silent regions histones are hypoacetylated. The histone acetyltransferases are divided into five families. These include the Gcn5-related acetyltransferases (GNATs); the MYST (for 'MOZ, Ybf2/Sas3, Sas2 and Tip60)-related HATs; p300/CBP HATs; the general transcription factor HATs, which include the TFIID subunit TAF250; and the nuclear hormone-related HATs SRC1 and ACTR (SRC3). The GCN5-related N-acetyltransferase superfamily includes such enzymes as the histone acetyltransferases GCN5 and Hat1, the elongator complex subunit Elp3, the mediator-complex subunit Nut1, and Hpa2 .    Many GNATs share several functional domains, including an N-terminal region of variable length, an acetyltransferase domain that encompasses the conserved sequence motifs described above, a region that interacts with the coactivator Ada2, and a C-terminal bromodomain that is believed to interact with acetyl-lysine residues. Members of the GNAT family are important for the regulation of cell growth and development. In mice, knockouts of Gcn5L are embryonic lethal. Yeast Gcn5 is needed for normal progression through the G2M boundary and mitotic gene expression. The importance of GNATs is probably related to their role in transcription and DNA repair.   Members of this entry belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This entry covers prokaryotes and the archaea. It contains rimI, which catalyses the acetylation of the N-terminal alanine of ribosomal protein S18 .; GO: 0016407 acetyltransferase activity, 0006474 N-terminal protein amino acid acetylation.
Probab=99.61  E-value=8.6e-15  Score=106.48  Aligned_cols=129  Identities=26%  Similarity=0.404  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHHCCCCC-CCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEE-EECCCCEEEEEEEEECCCCCCCCHH
Q ss_conf             8999999998538987-2100131103888876078999988989999998776-1188223899767885111389958
Q gi|254781162|r   41 DSSICAMHADSFGPGR-FVRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPI-SIEKITGHLLGPIVVHPLYQNKGIG  118 (192)
Q Consensus        41 ~~di~ai~~~~fgpgr-~~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv-~~~~~~~~~LgplaV~P~~rg~GiG  118 (192)
                      ..++.+|++.+|.-+. .+++++..-..-..-..+ ++|..|+++||++..+++ .+.-.++..+. +||+|++||+|||
T Consensus         2 ~~~v~~ie~~af~~~~PW~~~~f~~~l~i~~~~~y-l~a~~g~~~~Gy~~~~r~~~~~~~Ea~i~~-iaV~pe~Qg~GiG   79 (140)
T TIGR01575         2 LKAVLEIEKAAFTVDSPWTEAAFAEELAINYYTCY-LLAEIGGKVVGYIGISRIVQIVLDEAHILN-IAVKPEYQGQGIG   79 (140)
T ss_pred             HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEE-EEEEECCEEEEEEEEEEEEEEECCCCEEEE-EEECCCCCCCCHH
T ss_conf             47999998987169999887898865101333014-456628778987765678875437744899-9887120166378


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEE---E---CHHHHHHCCCEECCCCCEECCCCC--CHHHEE
Q ss_conf             9999999999961388479984---0---865787429487463653668999--956669
Q gi|254781162|r  119 RKLISMSVDAAEKKGSQVIVLV---G---DIAYYSKLGFQAVPWKSLILPAPV--DPNRVL  171 (192)
Q Consensus       119 ~~Li~~~l~~a~~~g~~~v~l~---g---~~~yY~rfGF~~~~~~~l~~p~pv--~~~~~l  171 (192)
                      ++|+++.++.++..|...++|-   +   +..+|+|+||+.+....=..|.|.  .+..+|
T Consensus        80 ~~LL~~L~~~~~~~~~~~~~LEVR~SN~~A~~LY~k~GF~~~~~r~~YY~~~~GrEDA~~M  140 (140)
T TIGR01575        80 RALLRELIKEAKGRGVNEIFLEVRVSNVAAQALYKKLGFNEIAIRKNYYPDPEGREDAIVM  140 (140)
T ss_pred             HHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCC
T ss_conf             8999999999851898389984614068999987771850101043568887962223039


No 9  
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.59  E-value=3.1e-14  Score=103.24  Aligned_cols=123  Identities=16%  Similarity=0.156  Sum_probs=86.2

Q ss_pred             CEEEEEECCHHHHHHHHHHHCCCC----C-----CCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEECCCC-EE
Q ss_conf             203442079899999999853898----7-----2100131103888876078999988989999998776118822-38
Q gi|254781162|r   32 AFFLERLEHDSSICAMHADSFGPG----R-----FVRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPISIEKIT-GH  101 (192)
Q Consensus        32 ~~~~~R~e~~~di~ai~~~~fgpg----r-----~~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~~~~~-~~  101 (192)
                      ++++||+-+++|++||.+.--.|.    .     .+.....-|....+ ....|||+.+|+|||++.+......... ..
T Consensus         2 s~i~IR~~~~~D~~ai~~i~~~~~v~~~t~~~p~p~~~~~~~~l~~~~-~~~~lVa~~dg~vvG~~~~~~~~~~r~~h~a   80 (162)
T PRK10140          2 SEIVIRHAETRDYEAIRQIHAQPEVYHNTLQVPHPSDHMWQERLTDRP-GIKQLVACIDGIVVGHLTIDVQQRPRRSHVA   80 (162)
T ss_pred             CCEEEECCCHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHCCC-CCCEEEEEECCEEEEEEEEECCCCCCEEEEE
T ss_conf             956985399789999999984935441606799969999999985288-9847999999999999998726787222699


Q ss_pred             EEEEEEECCCCCCCCHHHHHHHHHHHHHHH-CCCCEEEEE---EC---HHHHHHCCCEECCC
Q ss_conf             997678851113899589999999999961-388479984---08---65787429487463
Q gi|254781162|r  102 LLGPIVVHPLYQNKGIGRKLISMSVDAAEK-KGSQVIVLV---GD---IAYYSKLGFQAVPW  156 (192)
Q Consensus       102 ~LgplaV~P~~rg~GiG~~Li~~~l~~a~~-~g~~~v~l~---g~---~~yY~rfGF~~~~~  156 (192)
                      .+| ++|+|+|||+|||++||+.+++.|.+ .+...+.|.   .+   ...|+|+||+....
T Consensus        81 ~~g-i~V~~~~~g~GiG~~Ll~~~i~~a~~~~~l~ri~l~V~~~N~~Ai~Ly~k~GF~~eG~  141 (162)
T PRK10140         81 DFG-ICVDSRWKNRGVASALMREMIDMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGT  141 (162)
T ss_pred             EEE-EEECHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHCCCEEEEE
T ss_conf             999-9999888698999999999999997316869999999869999999999889989988


No 10 
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.50  E-value=1.4e-13  Score=99.29  Aligned_cols=123  Identities=15%  Similarity=0.162  Sum_probs=95.6

Q ss_pred             EEEECCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCC
Q ss_conf             44207989999999985389872100131103888876078999988989999998776118822389976788511138
Q gi|254781162|r   35 LERLEHDSSICAMHADSFGPGRFVRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQN  114 (192)
Q Consensus        35 ~~R~e~~~di~ai~~~~fgpgr~~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg  114 (192)
                      .+|.-+..|+..|.++.-.-...--...|-|+.-....+--+|.|.||.||||+.+.|..  ......++.++|+|+||+
T Consensus       296 ~iR~A~~~Dv~~Il~Li~Ple~~G~Lv~Rsre~le~eI~~f~V~e~Dg~iigCaALy~~~--~~~~aElaclav~~~y~~  373 (441)
T PRK05279        296 QLRRATIDDVGGILELIRPLEEQGILVRRSREQLEREIDQFTVIERDGVIIGCAALYPFP--EEKMGEMACLAVHPDYRG  373 (441)
T ss_pred             HHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEEEECCCEEEEEEEEECC--CCCEEEEEEEEECHHHCC
T ss_conf             835686767999999978898679700189999997646369999889599999600038--778068888898786618


Q ss_pred             CCHHHHHHHHHHHHHHHCCCCEEEEEEC--HHHHHHCCCEECCCCCE
Q ss_conf             9958999999999996138847998408--65787429487463653
Q gi|254781162|r  115 KGIGRKLISMSVDAAEKKGSQVIVLVGD--IAYYSKLGFQAVPWKSL  159 (192)
Q Consensus       115 ~GiG~~Li~~~l~~a~~~g~~~v~l~g~--~~yY~rfGF~~~~~~~l  159 (192)
                      +|+|.+|++++.+.|+++|...++++..  ..||...||+......+
T Consensus       374 ~g~G~~Ll~~~e~~A~~~g~~~lF~LTTqt~hwF~e~GF~~~~~~~L  420 (441)
T PRK05279        374 SGRGERLLKRIEQRARQQGLSRLFVLTTRTAHWFLERGFVPADVDDL  420 (441)
T ss_pred             CCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCCCHHHC
T ss_conf             98799999999999998699879999656388899759830892769


No 11 
>cd04301 GNAT GCN5-related N-acetyltransferases (GNAT) represent a large superfamily of functionally diverse enzymes that catalyze the transfer of an acetyl group from acetyl-Coenzyme A to the primary amine of a wide range of acceptor substrates. Members of this superfamily include aminoglycoside N-acetyltransferases, serotonin N-acetyltransferase, glucosamine-6-phosphate N-acetyltransferase, the histone acetyltransferases, mycothiol synthase, and the Fem family of amino acyl transferases.
Probab=99.46  E-value=5.8e-13  Score=95.76  Aligned_cols=76  Identities=25%  Similarity=0.455  Sum_probs=65.7

Q ss_pred             EEEEECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC------HHHHHHC
Q ss_conf             9999889899999987761188223899767885111389958999999999996138847998408------6578742
Q gi|254781162|r   76 FLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGD------IAYYSKL  149 (192)
Q Consensus        76 lVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~------~~yY~rf  149 (192)
                      |||+++|+|||++.+.+.... .+...+..++|+|++||+|+|++||+++++.|++.|+..+.+...      ..||+|+
T Consensus         2 ~Vae~~g~ivG~~~~~~~~~~-~~~~~i~~i~V~~~~rg~GiG~~L~~~~~~~a~~~~~~~i~l~v~~~N~~a~~~y~k~   80 (83)
T cd04301           2 LVAEDDGELVGFASFFIYRPA-PREAEIEGLAVDPSYRGQGLGSALLDALIDWALERGARRLYLDTSPDNEAAIAFYEKL   80 (83)
T ss_pred             EEEEECCEEEEEEEEEEECCC-CCEEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHC
T ss_conf             999999989999999997389-9979999999999992999389999999999998799899999928989999999976


Q ss_pred             CCE
Q ss_conf             948
Q gi|254781162|r  150 GFQ  152 (192)
Q Consensus       150 GF~  152 (192)
                      ||+
T Consensus        81 Gft   83 (83)
T cd04301          81 GFT   83 (83)
T ss_pred             CCC
T ss_conf             999


No 12 
>PRK01346 hypothetical protein; Provisional
Probab=99.46  E-value=8.8e-13  Score=94.70  Aligned_cols=123  Identities=14%  Similarity=0.229  Sum_probs=92.3

Q ss_pred             CEEEEEECCHHHHHHHHHH---HCCCCCCCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEE--E-CCC--CEEEE
Q ss_conf             2034420798999999998---53898721001311038888760789999889899999987761--1-882--23899
Q gi|254781162|r   32 AFFLERLEHDSSICAMHAD---SFGPGRFVRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPIS--I-EKI--TGHLL  103 (192)
Q Consensus        32 ~~~~~R~e~~~di~ai~~~---~fgpgr~~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~--~-~~~--~~~~L  103 (192)
                      ..|.+|+-++.|.++..++   +|+.-...+.....|..  ....-.+.+.+++++||.+..+|..  + +|.  +.-++
T Consensus         5 ~~~~iR~l~~~d~~~~~~l~~~aF~~~~~~e~~~~~~~~--~~~~~~~ga~d~~~lVg~~~~~~~~l~vpgG~~vp~agI   82 (411)
T PRK01346          5 DTITIRVLTEDDWPAWFRAAARGFGDSPPDEELEAWRTL--VEPDRTLGAFDGDDVVGTALAFDLELTVPGGAVLPAAAV   82 (411)
T ss_pred             CCCEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHC--CCCCCEEEEEECCEEEEEEEEECEEEEEECCCEEECCCE
T ss_conf             651654099899999999999873999986889988732--686746999999999999996144877308838871617


Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE-CHHHHHHCCCEECCC
Q ss_conf             76788511138995899999999999613884799840-865787429487463
Q gi|254781162|r  104 GPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVG-DIAYYSKLGFQAVPW  156 (192)
Q Consensus       104 gplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g-~~~yY~rfGF~~~~~  156 (192)
                      +.|+|.|+|||+|+.++||++.++.++++|....+|.. ...||+||||..+..
T Consensus        83 t~Vav~PehRrrG~~~~Lm~~~L~~~r~~G~~ls~L~pse~~iY~RfGyg~at~  136 (411)
T PRK01346         83 TAVTVAPTHRRRGLLTALMREQLRRIAERGEPVAALTASEGGIYGRFGYGVATY  136 (411)
T ss_pred             EEEEECHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEE
T ss_conf             899988310678589999999999999779839999506766014654213067


No 13 
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.43  E-value=2.6e-13  Score=97.77  Aligned_cols=120  Identities=20%  Similarity=0.271  Sum_probs=88.9

Q ss_pred             EEEEECCHHHHHHHHHHH--C-CCCC-CCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEEEC
Q ss_conf             344207989999999985--3-8987-21001311038888760789999889899999987761188223899767885
Q gi|254781162|r   34 FLERLEHDSSICAMHADS--F-GPGR-FVRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVH  109 (192)
Q Consensus        34 ~~~R~e~~~di~ai~~~~--f-gpgr-~~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~  109 (192)
                      +.+|--+.+|+.+|.++.  + .+|- -.++...+-+   ....+ .|++.+|.|||++.+.|.  ...+.-.+..|+|+
T Consensus         1 ~~iR~A~~~Di~~I~~Li~~~~~~gil~~rs~~~le~---~i~dF-~i~E~~g~viGCaaL~~~--~~~~~gE~~~laV~   74 (153)
T COG1246           1 EQIRKARISDIPAILELIRPLELQGILLRRSREQLEE---EIDDF-TIIERDGKVIGCAALHPV--LEEDLGELRSLAVH   74 (153)
T ss_pred             CCEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH---HHHHH-EEEEECCCEEEEEECCCC--CCCCEEEEEEEEEC
T ss_conf             9100032024288999999974146420315989999---87655-243227938999840356--75672567777877


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE--CHHHHHHCCCEECCCCCE
Q ss_conf             11138995899999999999613884799840--865787429487463653
Q gi|254781162|r  110 PLYQNKGIGRKLISMSVDAAEKKGSQVIVLVG--DIAYYSKLGFQAVPWKSL  159 (192)
Q Consensus       110 P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g--~~~yY~rfGF~~~~~~~l  159 (192)
                      |+||++|+|..|+++++..|++.|...++++.  .+.|++++||+.+....+
T Consensus        75 pd~r~~G~G~~Ll~~~~~~Ar~~gi~~~f~LTt~~~~~F~~~GF~~vd~~~L  126 (153)
T COG1246          75 PDYRGSGRGERLLERLLADARELGIKELFVLTTRSPEFFAERGFTRVDKDEL  126 (153)
T ss_pred             HHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCEECCCCCC
T ss_conf             8763887089999999999887497013433146688999809866763538


No 14 
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.41  E-value=3.6e-12  Score=91.13  Aligned_cols=120  Identities=18%  Similarity=0.277  Sum_probs=82.9

Q ss_pred             EEEEECCHHHHHHHHHHH---CCCCCCCCEE---------EEEE----CCCCCCCCEEEEEEE-CCEEEEEEEEEEEEEC
Q ss_conf             344207989999999985---3898721001---------3110----388887607899998-8989999998776118
Q gi|254781162|r   34 FLERLEHDSSICAMHADS---FGPGRFVRAA---------VLLR----EQGMHDLSLSFLCAE-GKRIVGSVRMTPISIE   96 (192)
Q Consensus        34 ~~~R~e~~~di~ai~~~~---fgpgr~~~~~---------~~lR----~~~~~~~~lslVA~~-~~~IVG~i~~~pv~~~   96 (192)
                      +..+..++.||.+|..++   |.-.||--+-         |...    -... -...|+|+.. +|+|+|.|.+-....+
T Consensus        83 ~~~~~A~~~Dip~L~~lA~~aF~~SRFr~P~~~~~~~~rfY~~Wie~aV~G~-fD~~cLv~~~~~g~i~GFvtlr~l~~~  161 (231)
T PRK10975         83 IGAEVATETDIPALRQLAAQAFAQSRFRAPWYAPDASGRFYAQWIENAVRGT-FDHQCLILRDATGQIRGFVSLRELNDT  161 (231)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC-CCCEEEEEECCCCCEEEEEEEEECCCC
T ss_conf             7631177757999999998651021257987797898789999999984666-585689998689977899999852798


Q ss_pred             CCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE---EC---HHHHHHCCCEECCCC
Q ss_conf             82238997678851113899589999999999961388479984---08---657874294874636
Q gi|254781162|r   97 KITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLV---GD---IAYYSKLGFQAVPWK  157 (192)
Q Consensus        97 ~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~---g~---~~yY~rfGF~~~~~~  157 (192)
                      .  + -+|-++|+|++||+|||++||++++++|+++|...+.+.   ++   ..+|.|+||+...+.
T Consensus       162 ~--a-~IgLlAV~P~~rG~GiG~~Lm~aa~~wa~~~g~~~l~l~tq~~N~~AirLY~~~GF~ie~t~  225 (231)
T PRK10975        162 D--A-RIGLLAVFPGAQGRGIGAELMQAALNWAQARGLTTLRVATQMGNTAALKLYIQSGANIESTA  225 (231)
T ss_pred             C--C-EEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCEEEEEE
T ss_conf             6--3-78898898301279889999999999999859978999985789999999998698275679


No 15 
>KOG3139 consensus
Probab=99.40  E-value=5.6e-12  Score=90.01  Aligned_cols=111  Identities=20%  Similarity=0.293  Sum_probs=85.4

Q ss_pred             HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEECCE-EEEEEEEE-EEEECCCCEEEEEEEEECCCCCCCCHHH
Q ss_conf             999999998538987210013110388887607899998898-99999987-7611882238997678851113899589
Q gi|254781162|r   42 SSICAMHADSFGPGRFVRAAVLLREQGMHDLSLSFLCAEGKR-IVGSVRMT-PISIEKITGHLLGPIVVHPLYQNKGIGR  119 (192)
Q Consensus        42 ~di~ai~~~~fgpgr~~~~~~~lR~~~~~~~~lslVA~~~~~-IVG~i~~~-pv~~~~~~~~~LgplaV~P~~rg~GiG~  119 (192)
                      .+|-.+.+..+   ....+.+.-|-...+-+.++|+|.+++. -||.+... +...+ .-..-+..+||+++|||+|||+
T Consensus        28 ~~im~Li~k~l---sepyS~~tyrYf~~~wp~~~~~a~d~~~~~VGai~ck~~~~r~-~~rgyi~mLaV~~e~Rg~GIg~  103 (165)
T KOG3139          28 ADIMRLIDKDL---SEPYSIYTYRYFVPNWPCFCFLALDEKGDTVGAIVCKLDTHRN-TLRGYIAMLAVDSEYRGQGIGK  103 (165)
T ss_pred             HHHHHHHHHHC---CCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEECCCCCC-CCEEEEEEEEECHHHCCCCHHH
T ss_conf             88998874014---8566777877502578668999990788668899983445577-6448999999612533456899


Q ss_pred             HHHHHHHHHHHHCCCCEEEEEEC------HHHHHHCCCEECCC
Q ss_conf             99999999996138847998408------65787429487463
Q gi|254781162|r  120 KLISMSVDAAEKKGSQVIVLVGD------IAYYSKLGFQAVPW  156 (192)
Q Consensus       120 ~Li~~~l~~a~~~g~~~v~l~g~------~~yY~rfGF~~~~~  156 (192)
                      +|++.+|+.++.+|+..|+|-.+      ..+|+++||+....
T Consensus       104 aLvr~aId~m~~~g~~eVvLeTe~~n~~A~~LY~sLGF~r~~r  146 (165)
T KOG3139         104 ALVRKAIDAMRSRGYSEVVLETEVTNLSALRLYESLGFKRDKR  146 (165)
T ss_pred             HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCEEECC
T ss_conf             9999999999977996899832433418999988549467331


No 16 
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.39  E-value=1.3e-13  Score=99.54  Aligned_cols=121  Identities=16%  Similarity=0.165  Sum_probs=90.7

Q ss_pred             CEEEEEECCHHHHHHHHHHH--CCC-CC-CCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEE
Q ss_conf             20344207989999999985--389-87-210013110388887607899998898999999877611882238997678
Q gi|254781162|r   32 AFFLERLEHDSSICAMHADS--FGP-GR-FVRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPISIEKITGHLLGPIV  107 (192)
Q Consensus        32 ~~~~~R~e~~~di~ai~~~~--fgp-gr-~~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~~~~~~~~Lgpla  107 (192)
                      .-|.||..+-+||++|+.++  |+. |- -+|+.--+-++   ..++ +|||.+|+|+|+..++-...+   -..+-.++
T Consensus       462 ~~i~iR~Arl~Dv~~i~~lv~~~A~~G~~LpR~~~~l~~~---i~~f-~vaE~~g~v~g~~sl~i~~~~---LAEIrsl~  534 (614)
T PRK12308        462 SGVKVRPARLTDIDAIEGMVAYWAGLGENLPRTRNELVRD---IGSF-AVAEHHGEVTGCASLYIYDSG---LAEIRSLG  534 (614)
T ss_pred             CCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHH---HHHH-EEEEECCEEEEEEEEEEEECC---HHHHHHHH
T ss_conf             8736632567738999999999864124588877889998---7664-266557818888789886167---19999861


Q ss_pred             ECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC-HHHHHHCCCEECCCCCE
Q ss_conf             85111389958999999999996138847998408-65787429487463653
Q gi|254781162|r  108 VHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGD-IAYYSKLGFQAVPWKSL  159 (192)
Q Consensus       108 V~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~-~~yY~rfGF~~~~~~~l  159 (192)
                      |.|+||++|+|+.|+++.++.|++.+...|+++.. |+||.+.||..+++..+
T Consensus       535 v~~~~~~~G~G~~lV~~~l~~a~~~~~~rvfvLT~~p~fF~k~gf~~~~k~~l  587 (614)
T PRK12308        535 VEAGWQVQGQGKALVQYLVEKARQMAIKKVFVLTRVPEFFMKQGFSPTSKSLL  587 (614)
T ss_pred             CCHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCEECCHHHC
T ss_conf             67877742832899999999999837875899843718899759820784457


No 17 
>PRK09831 hypothetical protein; Provisional
Probab=99.34  E-value=4.1e-12  Score=90.82  Aligned_cols=128  Identities=13%  Similarity=0.157  Sum_probs=84.6

Q ss_pred             EEEEECCHHHHHHHHHHHC------CCCCCCCEEEEEEC-------CCCCCCCEEEEEEECCEEEEEEEEEEEEECCCCE
Q ss_conf             3442079899999999853------89872100131103-------8888760789999889899999987761188223
Q gi|254781162|r   34 FLERLEHDSSICAMHADSF------GPGRFVRAAVLLRE-------QGMHDLSLSFLCAEGKRIVGSVRMTPISIEKITG  100 (192)
Q Consensus        34 ~~~R~e~~~di~ai~~~~f------gpgr~~~~~~~lR~-------~~~~~~~lslVA~~~~~IVG~i~~~pv~~~~~~~  100 (192)
                      |.||+=+++|..++.++-+      ++..++.....-.-       ...-.....+||+.++++||++.+.    +   .
T Consensus         1 m~IR~~~~~D~~~l~~lf~~aV~~~~~~~Ys~~Q~~aWa~~~~~~w~~~l~~~~~~VA~~~~~ivGF~~~~----~---~   73 (147)
T PRK09831          1 IQIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQIDESRWKEKLAKSQVRVAVINAQPVGFITCI----E---H   73 (147)
T ss_pred             CEEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCEEEEEECCEEEEEEECC----C---C
T ss_conf             97442777779999999999998634012999999988679989999987509569999999988988548----8---8


Q ss_pred             EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE---EECHHHHHHCCCEECCCCCEECCCCCCHHHEEEEE
Q ss_conf             899767885111389958999999999996138847998---40865787429487463653668999956669843
Q gi|254781162|r  101 HLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVL---VGDIAYYSKLGFQAVPWKSLILPAPVDPNRVLFLP  174 (192)
Q Consensus       101 ~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l---~g~~~yY~rfGF~~~~~~~l~~p~pv~~~~~l~l~  174 (192)
                       .|..++|+|+|||+|||++|+++.+..+     ..+.+   ..+-+||+|.||+.+....+..-|-.=+++.|-+.
T Consensus        74 -~id~lfV~p~~~g~Gvg~~Ll~~l~~~~-----~~l~~~aS~~A~pFFe~~Gf~vv~~q~v~~~G~~l~n~~M~K~  144 (147)
T PRK09831         74 -YIDMLFVDPEYTRRGVASALLKPLIKSE-----SELTVDASITAKPFFERYGFQTVKQQRVECRGAWFTNFYMRYK  144 (147)
T ss_pred             -EEEEEEECHHHCCCCHHHHHHHHHHHHC-----CCEEEEHHHHHHHHHHHCCCEEEEEEEEEECCEEECCCEEEEC
T ss_conf             -0899998866538989999999998417-----2058631576388899769799877568569989707042747


No 18 
>PRK10314 hypothetical protein; Provisional
Probab=99.33  E-value=2e-11  Score=86.79  Aligned_cols=130  Identities=11%  Similarity=0.161  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHHCCCCCCCCEEEEEECCCCC-CCCEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHH
Q ss_conf             899999999853898721001311038888-7607899998898999999877611882238997678851113899589
Q gi|254781162|r   41 DSSICAMHADSFGPGRFVRAAVLLREQGMH-DLSLSFLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGR  119 (192)
Q Consensus        41 ~~di~ai~~~~fgpgr~~~~~~~lR~~~~~-~~~lslVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~  119 (192)
                      --+|-.|...+|--.-.  ..+..-++.+. ..++-+++.+++++||+.++.+.... .....+|.|+|++++||+|+|+
T Consensus        17 ly~il~lR~~VFV~EQ~--~p~~d~D~~D~~~~~~H~~~~~~~~~va~~Ri~~~~~~-~~~~~IGRVaV~k~~Rg~glG~   93 (153)
T PRK10314         17 LYALLQLRCAVFVVEQN--CPYQDIDGDDLTGDNRHILGWKNDELVAYARILKSDDD-LEPVVIGRVIVSEALRGEKVGQ   93 (153)
T ss_pred             HHHHHHHHHHHEEECCC--CCCHHHHCCCCCCCCEEEEEEECCEEEEEEEEECCCCC-CCCEEEEEEEECHHHCCCCHHH
T ss_conf             99999988873780179--89432215666676189999959938899987258988-7734787899758784998999


Q ss_pred             HHHHHHHHHHHHCC-CCEEEEEEC---HHHHHHCCCEECCCCCEECCCCCCHHHEEEEECC
Q ss_conf             99999999996138-847998408---6578742948746365366899995666984357
Q gi|254781162|r  120 KLISMSVDAAEKKG-SQVIVLVGD---IAYYSKLGFQAVPWKSLILPAPVDPNRVLFLPLV  176 (192)
Q Consensus       120 ~Li~~~l~~a~~~g-~~~v~l~g~---~~yY~rfGF~~~~~~~l~~p~pv~~~~~l~l~L~  176 (192)
                      +||+.+++.+++.. ...+.+...   .+||++|||+++..  ..+...+| .--|.++|.
T Consensus        94 ~Lm~~~l~~~~~~~~~~~i~l~AQ~~~~~FY~~~GF~~~g~--~f~E~GIp-Hi~M~k~l~  151 (153)
T PRK10314         94 QLMSKTLESCTRHWPDKPLYLGAQAHLQNFYASFGFIPVTD--VYEEDGIP-HIGMAREVI  151 (153)
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCEECCC--CEEECCCC-HHHHHHHHH
T ss_conf             99999999999977999789962899999999879988898--45538985-798877753


No 19 
>pfam00583 Acetyltransf_1 Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.
Probab=99.32  E-value=1.2e-11  Score=88.09  Aligned_cols=74  Identities=32%  Similarity=0.421  Sum_probs=63.1

Q ss_pred             EEECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC------HHHHHHCCC
Q ss_conf             99889899999987761188223899767885111389958999999999996138847998408------657874294
Q gi|254781162|r   78 CAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGD------IAYYSKLGF  151 (192)
Q Consensus        78 A~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~------~~yY~rfGF  151 (192)
                      ++++|+|||++.+++.... .+...+..++|+|+|||+|+|++||+++++.+++.|+..+.+...      ..||+|+||
T Consensus         1 ~~~~g~ivG~~~~~~~~~~-~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~GF   79 (80)
T pfam00583         1 AEEDGELVGFASLSIIDEE-GNVAEIEGLAVDPEYRGKGIGTALLEALEEYARELGLKRIELEVLEDNEAAIALYEKLGF   79 (80)
T ss_pred             CCCCCEEEEEEEEEEECCC-CCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCC
T ss_conf             9678989999999996489-999999999999899599879999999999999879999999992787999999998697


Q ss_pred             E
Q ss_conf             8
Q gi|254781162|r  152 Q  152 (192)
Q Consensus       152 ~  152 (192)
                      +
T Consensus        80 ~   80 (80)
T pfam00583        80 K   80 (80)
T ss_pred             C
T ss_conf             9


No 20 
>PRK10562 hypothetical protein; Provisional
Probab=99.31  E-value=8e-12  Score=89.10  Aligned_cols=126  Identities=17%  Similarity=0.293  Sum_probs=76.5

Q ss_pred             EEEECCHHHHHHHHHHHCC---------CCC-CCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEECCCCEEEEE
Q ss_conf             4420798999999998538---------987-210013110388887607899998898999999877611882238997
Q gi|254781162|r   35 LERLEHDSSICAMHADSFG---------PGR-FVRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPISIEKITGHLLG  104 (192)
Q Consensus        35 ~~R~e~~~di~ai~~~~fg---------pgr-~~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~~~~~~~~Lg  104 (192)
                      +||+-+++|+.+|-++=..         +.. .......+|+.--+.. -.+|++++|+|+|.+.+..   ++    .++
T Consensus         1 mIR~~~~~D~~~l~~IW~~s~~~ah~Fl~~~~~~~~~~~vr~~~lp~~-~~~V~e~~g~ivGFi~~~~---~~----~i~   72 (145)
T PRK10562          1 MIREYQPSDLPAILQLWLESTIWAHPFIKEQYWRESAPLVRDVYLPAA-QTWVWEEDGKLLGFVSILE---GR----FVG   72 (145)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC-EEEEEEECCEEEEEEEECC---CC----EEE
T ss_conf             976387667999999999999866745598999986999998646656-3999996996899999569---99----761


Q ss_pred             EEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC---HHHHHHCCCEECCCCCEECCCCCCHHHEEE
Q ss_conf             67885111389958999999999996138847998408---657874294874636536689999566698
Q gi|254781162|r  105 PIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGD---IAYYSKLGFQAVPWKSLILPAPVDPNRVLF  172 (192)
Q Consensus       105 plaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~---~~yY~rfGF~~~~~~~l~~p~pv~~~~~l~  172 (192)
                      .|+|+|++||+|||++||+++.+...  ...+-+...+   ..||+|.||+.+....-  +..-.|+..|.
T Consensus        73 ~LfV~p~~~g~GiG~~Ll~~a~~~~~--~l~L~v~~~N~~A~~FY~~~GF~~~~~~~~--~~tg~p~~~m~  139 (145)
T PRK10562         73 ALFVAPKAHRRGIGKALMQYVQQRYP--HLSLEVYQKNQRAVNFYHAQGFRIVDCAWQ--EETQHPTWIMS  139 (145)
T ss_pred             EEEECHHHCCCCHHHHHHHHHHHHCC--CEEEEECCCCHHHHHHHHHCCCEEEEEECC--CCCCCCEEEEE
T ss_conf             16887643378899999999996389--349998257978999999889999623368--88899159999


No 21 
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.23  E-value=3.6e-10  Score=79.39  Aligned_cols=123  Identities=21%  Similarity=0.298  Sum_probs=84.9

Q ss_pred             EEEEEE----CCHHHHHHHHHHHCC--C--CCCCCEEEEEECCC-CCCCCEEEEEEE--CCEEEEEEEEEEEEECCCCEE
Q ss_conf             034420----798999999998538--9--87210013110388-887607899998--898999999877611882238
Q gi|254781162|r   33 FFLERL----EHDSSICAMHADSFG--P--GRFVRAAVLLREQG-MHDLSLSFLCAE--GKRIVGSVRMTPISIEKITGH  101 (192)
Q Consensus        33 ~~~~R~----e~~~di~ai~~~~fg--p--gr~~~~~~~lR~~~-~~~~~lslVA~~--~~~IVG~i~~~pv~~~~~~~~  101 (192)
                      -+.+|+    .++.+.-+++|.+|.  |  |+-+...+..|... -+++...|++++  +++|+|++ .+++.-.....-
T Consensus       149 Gv~lr~f~~~~De~~wl~vnn~AFa~HPEqg~wt~~dl~~r~~e~WFdP~g~lla~~~~~g~lvGF~-wtk~h~~~~~~G  227 (292)
T TIGR03448       149 GVTVRAYVGAPDDAEWLRVNNAAFAWHPEQGGWTRADLAERRAEPWFDPAGLFLAFDDAPGELLGFH-WTKVHPDEPALG  227 (292)
T ss_pred             CEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEEE-EEEECCCCCCCC
T ss_conf             8688436787767999999999974598678875678998750777484773899847998399999-998637888852


Q ss_pred             EEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC------HHHHHHCCCEECCC
Q ss_conf             99767885111389958999999999996138847998408------65787429487463
Q gi|254781162|r  102 LLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGD------IAYYSKLGFQAVPW  156 (192)
Q Consensus       102 ~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~------~~yY~rfGF~~~~~  156 (192)
                      .+..+.|+|++||+|+|+.|+..++..++.+|...+.|.-+      ...|+++||.....
T Consensus       228 EvYvvGV~p~~rGrGLG~aL~~~gL~~l~~~G~~~v~LyVd~dN~~A~~lY~~LGF~~~~~  288 (292)
T TIGR03448       228 EVYVVGVDPAAQGRGLGDALTLIGLHHLAARGLPAVMLYVEADNEAAVRTYEKLGFTVAEV  288 (292)
T ss_pred             EEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEEEE
T ss_conf             5999998834247767899999999999987998899983788889999998569958400


No 22 
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.21  E-value=9.1e-11  Score=82.90  Aligned_cols=143  Identities=20%  Similarity=0.317  Sum_probs=89.6

Q ss_pred             HHHCCEEEEEECCHHHHH-----HHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEEC---C----EEEEEEEEEEEEE
Q ss_conf             320120344207989999-----999985389872100131103888876078999988---9----8999999877611
Q gi|254781162|r   28 QKIGAFFLERLEHDSSIC-----AMHADSFGPGRFVRAAVLLREQGMHDLSLSFLCAEG---K----RIVGSVRMTPISI   95 (192)
Q Consensus        28 ~~~~~~~~~R~e~~~di~-----ai~~~~fgpgr~~~~~~~lR~~~~~~~~lslVA~~~---~----~IVG~i~~~pv~~   95 (192)
                      ......+.+|.....|+.     .++..+|..- ...+.............+.+|+..+   +    +++|++..+....
T Consensus         6 ~~~~~~~~ir~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~G~~~~~~~~~   84 (177)
T COG0456           6 ELSEDKVTIREAINKDLLDVALAALEARTFDIR-LPWSREYFEKDLTQAPELLLVAETGGLDGLLDGKVVGFLLVRVVDG   84 (177)
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC-CCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECC
T ss_conf             667555653314076656789988877515767-6430999999860487369999626666654310458999974047


Q ss_pred             CC---CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC-CEEEEEE------CHHHHHHCCCEECCCCCEECCCCC
Q ss_conf             88---2238997678851113899589999999999961388-4799840------865787429487463653668999
Q gi|254781162|r   96 EK---ITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGS-QVIVLVG------DIAYYSKLGFQAVPWKSLILPAPV  165 (192)
Q Consensus        96 ~~---~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~-~~v~l~g------~~~yY~rfGF~~~~~~~l~~p~pv  165 (192)
                      ..   ..++ +..++|+|+|||+|||++|++++++.+++.+. ..+.|.-      +..+|+|+||+......-..+.+.
T Consensus        85 ~~~~~~~~~-i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~~~~~~~~~L~V~~~N~~Ai~lY~~~GF~~~~~~~~yy~~~~  163 (177)
T COG0456          85 RPSADHEGH-IYNLAVDPEYRGRGIGRALLDEALERLRERGLADKIVLEVRESNEAAIGLYRKLGFEVVKIRKNYYADGN  163 (177)
T ss_pred             CCCCCCCEE-EEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCEEEHHHHHHHHCCC
T ss_conf             656676089-9999999787699899999999999998527673699999478699999999869943121375402455


Q ss_pred             CHHHEEE
Q ss_conf             9566698
Q gi|254781162|r  166 DPNRVLF  172 (192)
Q Consensus       166 ~~~~~l~  172 (192)
                      +..+.|.
T Consensus       164 ~~a~~~~  170 (177)
T COG0456         164 GDALLML  170 (177)
T ss_pred             CCHHHHH
T ss_conf             6499998


No 23 
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.21  E-value=2e-10  Score=80.97  Aligned_cols=146  Identities=20%  Similarity=0.269  Sum_probs=104.9

Q ss_pred             HHHHCCEEEEEECCHHHHHHHHHHHCCCC-CCCCEEEEEECCCCCCCCEEEEEEE--CCEEEEEEEEE---EEEECCCCE
Q ss_conf             33201203442079899999999853898-7210013110388887607899998--89899999987---761188223
Q gi|254781162|r   27 WQKIGAFFLERLEHDSSICAMHADSFGPG-RFVRAAVLLREQGMHDLSLSFLCAE--GKRIVGSVRMT---PISIEKITG  100 (192)
Q Consensus        27 ~~~~~~~~~~R~e~~~di~ai~~~~fgpg-r~~~~~~~lR~~~~~~~~lslVA~~--~~~IVG~i~~~---pv~~~~~~~  100 (192)
                      .+....|..-|....+|.+++..+--.-| -.......+..+......+ |||++  .|.|||+++--   ....+.+.+
T Consensus        77 ~~~~~g~~ir~~~~~~d~~~in~iy~~~~Mvp~~~~~~~~~~~~~~~~y-~vA~d~~tg~ivg~v~gvdH~~af~dpe~g  155 (547)
T TIGR03103        77 ARTPRGFTVRRLRGPADVDAINRLYAARGMVPVRVDFVLDHRHSRAITY-LVAEDEASGAIIGTVMGVDHRKAFNDPEHG  155 (547)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCEE-EEEEECCCCCEEEEEECCCHHHHCCCCCCC
T ss_conf             7788974899678766799999999976984799777315566787259-998607999579998654268652897678


Q ss_pred             EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE---EEC---HHHHHHCCCEECCCCCEECCCCCCHHHEEEE
Q ss_conf             899767885111389958999999999996138847998---408---6578742948746365366899995666984
Q gi|254781162|r  101 HLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVL---VGD---IAYYSKLGFQAVPWKSLILPAPVDPNRVLFL  173 (192)
Q Consensus       101 ~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l---~g~---~~yY~rfGF~~~~~~~l~~p~pv~~~~~l~l  173 (192)
                      -.|..|+|+|....-|+|.+|+++..+.-+.+|...+-|   ..+   ..+|+|+||+.+|...+.--.+++..-|..-
T Consensus       156 sSlW~LaVdpqa~~pgvGeaLvr~lae~~~~rg~~~~DLSV~hdN~~Ai~lY~kLgF~~~p~f~vKrkn~iNe~lf~gp  234 (547)
T TIGR03103       156 SSLWCLAVDPQAAHPGVGEALVRALAEHFQSRGCAYMDLSVMHDNEQAIALYEKLGFRRIPVFALKRKNAINERLFSGP  234 (547)
T ss_pred             CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCEECCEEEEECCCCCCCCCCCCC
T ss_conf             3136886668889998129999999999987693105110104868899999971975564578860575674324699


No 24 
>PRK10514 hypothetical protein; Provisional
Probab=99.20  E-value=1e-10  Score=82.65  Aligned_cols=115  Identities=18%  Similarity=0.240  Sum_probs=70.9

Q ss_pred             EEEEECCHHHHHHHHHHH---------CCCCCC-CCEEEEEECCCCCCCCEEEEE-EECCEEEEEEEEEEEEECCCCEEE
Q ss_conf             344207989999999985---------389872-100131103888876078999-988989999998776118822389
Q gi|254781162|r   34 FLERLEHDSSICAMHADS---------FGPGRF-VRAAVLLREQGMHDLSLSFLC-AEGKRIVGSVRMTPISIEKITGHL  102 (192)
Q Consensus        34 ~~~R~e~~~di~ai~~~~---------fgpgr~-~~~~~~lR~~~~~~~~lslVA-~~~~~IVG~i~~~pv~~~~~~~~~  102 (192)
                      |.||.-+.+|.++|.++=         |=+..+ .+.....++ .-+...+ +|| +++|+++|.+.+..       . .
T Consensus         2 ~~IR~~~~~D~~~l~~IW~~s~~~aH~Fl~~~~~~~~~~~v~~-ylp~~~~-~v~~~~~~~~~GFi~l~~-------~-~   71 (146)
T PRK10514          2 ISIRRSRHEEGERLVAIWRRSVDATHDFLSAEDRAEIEELVRS-FLPEAPL-WVAVDERDQPVGFMLLSG-------G-H   71 (146)
T ss_pred             CEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHHCCE-EEEEECCCCEEEEEEECC-------C-E
T ss_conf             2524498566999999999999988614999999999999998-7524859-999966995699999788-------9-8


Q ss_pred             EEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE---ECHHHHHHCCCEECCCCCEE
Q ss_conf             97678851113899589999999999961388479984---08657874294874636536
Q gi|254781162|r  103 LGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLV---GDIAYYSKLGFQAVPWKSLI  160 (192)
Q Consensus       103 LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~---g~~~yY~rfGF~~~~~~~l~  160 (192)
                      |+.|.|+|++||+|||++||+++++....  ...-+..   .+..||+|.||+.+......
T Consensus        72 i~~LFV~p~~~g~GiG~~Ll~~a~~~~~~--l~L~V~~~N~~A~~FY~~~GF~~~gr~~~d  130 (146)
T PRK10514         72 MEALFVDPDVRGCGVGRMLVEHALTLHPE--LTTDVNEQNEQAVGFYKKMGFKVTGRSEVD  130 (146)
T ss_pred             EEEEEECHHHCCCCHHHHHHHHHHHHCCC--CEEEEECCCHHHHHHHHHCCCEEECCCCCC
T ss_conf             87899878773999799999999873854--098500158689999997799897135679


No 25 
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=99.19  E-value=1.4e-10  Score=81.87  Aligned_cols=96  Identities=20%  Similarity=0.342  Sum_probs=75.1

Q ss_pred             EEEEE-CCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECH----HHHHHCC
Q ss_conf             99998-898999999877611882238997678851113899589999999999961388479984086----5787429
Q gi|254781162|r   76 FLCAE-GKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGDI----AYYSKLG  150 (192)
Q Consensus        76 lVA~~-~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~~----~yY~rfG  150 (192)
                      +..++ +|+++++.++-|....... +.+|.|+|.|+.||+|+|++||+++|+.+....-..-+.+++.    +||.+||
T Consensus        52 l~~~~~~g~LvAyaRLlp~~~~~~~-~~iGRV~v~~~~RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQahLq~fYa~~G  130 (155)
T COG2153          52 LLGWTPDGELVAYARLLPPGAEYEE-VSIGRVIVSPAARGQGLGQQLMEKALETAGREWPDKPVYLGAQAHLQDFYASFG  130 (155)
T ss_pred             EEEECCCCEEEEEEECCCCCCCCCC-EEEEEEEECHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHC
T ss_conf             9998699969999860777777575-255469977756224545999999999988628999869841787999999709


Q ss_pred             CEECCCCCEECCCCCCHHHEEEEEC
Q ss_conf             4874636536689999566698435
Q gi|254781162|r  151 FQAVPWKSLILPAPVDPNRVLFLPL  175 (192)
Q Consensus       151 F~~~~~~~l~~p~pv~~~~~l~l~L  175 (192)
                      |.++..  ..+..++| .-=|.++.
T Consensus       131 Fv~~~e--~yledGIp-Hv~M~r~~  152 (155)
T COG2153         131 FVRVGE--EYLEDGIP-HVGMIREV  152 (155)
T ss_pred             CEECCC--HHHCCCCC-CHHHHHCC
T ss_conf             677673--22137997-42344045


No 26 
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.03  E-value=1.2e-08  Score=70.42  Aligned_cols=126  Identities=20%  Similarity=0.234  Sum_probs=84.2

Q ss_pred             EEEEEECCHHHHHHHHHH---HCC--CCCCCCE--EEEEE----CCCCCCCCEEEEEEEC-CEEEEEEEEEEEEEC-CCC
Q ss_conf             034420798999999998---538--9872100--13110----3888876078999988-989999998776118-822
Q gi|254781162|r   33 FFLERLEHDSSICAMHAD---SFG--PGRFVRA--AVLLR----EQGMHDLSLSFLCAEG-KRIVGSVRMTPISIE-KIT   99 (192)
Q Consensus        33 ~~~~R~e~~~di~ai~~~---~fg--pgr~~~~--~~~lR----~~~~~~~~lslVA~~~-~~IVG~i~~~pv~~~-~~~   99 (192)
                      .|.||+-+.+|+++|.+.   ...  ...+.+.  ....|    .....+--.-+|++++ |+++|.+.+.+..-. ...
T Consensus         1 ~~~ir~~~~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~~~g~p~~V~~~~~g~v~G~a~~~~fr~r~ay~   80 (169)
T COG1247           1 EMEIRPATAADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRTRDGYPVVVAEEEDGKVLGYASAGPFRERPAYR   80 (169)
T ss_pred             CCEEECCHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCC
T ss_conf             91783170776799999987765304479851699989999999833668854999974798099999851004755655


Q ss_pred             EEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE-EE-----CHHHHHHCCCEECCCCC
Q ss_conf             3899767885111389958999999999996138847998-40-----86578742948746365
Q gi|254781162|r  100 GHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVL-VG-----DIAYYSKLGFQAVPWKS  158 (192)
Q Consensus       100 ~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l-~g-----~~~yY~rfGF~~~~~~~  158 (192)
                      ...--+++|+|++||+|+|++|++++++.++++|+..++- +.     ...+.+++||+.+....
T Consensus        81 ~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~~g~~~lva~I~~~n~aSi~lh~~~GF~~~G~~~  145 (169)
T COG1247          81 HTVELSIYLDPAARGKGLGKKLLQALITEARALGVRELVAGIESDNLASIALHEKLGFEEVGTFP  145 (169)
T ss_pred             EEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHCCCEEECCCC
T ss_conf             38999999985102466789999999999885884899999737873769999977977736345


No 27 
>KOG3397 consensus
Probab=98.97  E-value=2.6e-09  Score=74.43  Aligned_cols=117  Identities=16%  Similarity=0.245  Sum_probs=81.2

Q ss_pred             EEECCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEE--EEECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCC
Q ss_conf             420798999999998538987210013110388887607899--998898999999877611882238997678851113
Q gi|254781162|r   36 ERLEHDSSICAMHADSFGPGRFVRAAVLLREQGMHDLSLSFL--CAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQ  113 (192)
Q Consensus        36 ~R~e~~~di~ai~~~~fgpgr~~~~~~~lR~~~~~~~~lslV--A~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~r  113 (192)
                      -|+|--.|-.++-|...--.+.+  ..+--+..-....+|++  -|...++|||.+++++. +...+++...|.|+..+|
T Consensus        20 ~rPELlk~~~~LIN~eWPRS~Ts--R~hSL~~ScDs~P~sL~Ll~E~~~~VigH~rLS~i~-n~~~al~VEsVVV~k~~R   96 (225)
T KOG3397          20 DRPELLKESMTLINSEWPRSDTS--REHSLKKSCDSPPMSLLLLNEENDEVLGHSRLSHLP-NRDHALWVESVVVKKDQR   96 (225)
T ss_pred             CCHHHHHHHHHHHHCCCCCCHHH--HHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCCC-CCCCEEEEEEEEEEHHHC
T ss_conf             66789999999874438752257--676665135777615555336652001110014567-888516888888744331


Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCEEEEEEC--HHHHHHCCCEECC
Q ss_conf             89958999999999996138847998408--6578742948746
Q gi|254781162|r  114 NKGIGRKLISMSVDAAEKKGSQVIVLVGD--IAYYSKLGFQAVP  155 (192)
Q Consensus       114 g~GiG~~Li~~~l~~a~~~g~~~v~l~g~--~~yY~rfGF~~~~  155 (192)
                      |+|.|+.||+-+.+++|..|+..+.|..+  ..||+++||+...
T Consensus        97 G~GFGk~lMk~~E~~~R~~gf~~~yLsT~DQ~~FYe~lGYe~c~  140 (225)
T KOG3397          97 GLGFGKFLMKSTEKWMREKGFNEAYLSTDDQCRFYESLGYEKCD  140 (225)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHCCCCCC
T ss_conf             55388999999999999853321464112310166651410248


No 28 
>KOG3216 consensus
Probab=98.94  E-value=2.2e-08  Score=69.02  Aligned_cols=123  Identities=21%  Similarity=0.185  Sum_probs=88.5

Q ss_pred             CEEEEEECCHHHHHHHHHHH-----CC----CCCCCCEEEEEEC--CCCCCCCEEEEEEE---CCEEEEEEEEEEEEE--
Q ss_conf             20344207989999999985-----38----9872100131103--88887607899998---898999999877611--
Q gi|254781162|r   32 AFFLERLEHDSSICAMHADS-----FG----PGRFVRAAVLLRE--QGMHDLSLSFLCAE---GKRIVGSVRMTPISI--   95 (192)
Q Consensus        32 ~~~~~R~e~~~di~ai~~~~-----fg----pgr~~~~~~~lR~--~~~~~~~lslVA~~---~~~IVG~i~~~pv~~--   95 (192)
                      .++.||+-++.|.+.++.+.     |-    |-.-++..  ++.  -.++.--.++|+..   ++.++|.+.|.+...  
T Consensus         2 ~~~~IR~at~~D~~~i~rLikela~Fek~~~~v~~te~~--l~~~~F~d~~~~~~~v~~ie~~~~~~aGf~~yf~~ystW   79 (163)
T KOG3216           2 DNIRIRLATPKDCEDILRLIKELAEFEKLEDQVEATEEN--LARDGFIDPPFKHWLVAAIETSGEVVAGFALYFNNYSTW   79 (163)
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHCHHH--HHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCC
T ss_conf             845999648435789999999998788743612203356--666404688720899999824898146776551156630


Q ss_pred             CCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE------ECHHHHHHCCCEECCC
Q ss_conf             882238997678851113899589999999999961388479984------0865787429487463
Q gi|254781162|r   96 EKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLV------GDIAYYSKLGFQAVPW  156 (192)
Q Consensus        96 ~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~------g~~~yY~rfGF~~~~~  156 (192)
                      .+....-|..++|.|+|||+|+|+.|++..-+.|.+.|+..+-.+      -++.+|++.|.+....
T Consensus        80 ~~k~~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~~G~~rv~w~vldwN~rAi~lY~k~gaq~l~~  146 (163)
T KOG3216          80 LGKQGIYLEDLYVREQYRGKGIGSKLLKFVAEEADKLGTPRVEWVVLDWNHRAILLYEKVGAQDLKE  146 (163)
T ss_pred             CCCCEEEEEEEEECCHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCE
T ss_conf             0344078876472532203576899999999999973997079998124616899999857334340


No 29 
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase; InterPro: IPR010167   This entry represents a clade of amino-acid N-acetyltransferases, or N-acetylglutamate synthase, which is the product of the argA gene and the first enzyme in arginine biosynthesis. This enzyme displays more diversity between bacteria, fungi and mammals than other enzymes in arginine metabolism, and N-acetylglutamate itself can have different roles in different taxonomic groups: in prokaryotes, lower eukaryotes and plants it is the first intermediate in arginine biosynthesis, while in vertebrates it is an allosteric cofactor for the first enzyme in the urea cycle . In bacteria, arginine can regulate ornithine biosynthesis via a feedback inhibition mechanism . This enzyme may also act on aspartate.; GO: 0004042 amino-acid N-acetyltransferase activity, 0006526 arginine biosynthetic process, 0005737 cytoplasm.
Probab=98.88  E-value=1.4e-09  Score=75.94  Aligned_cols=122  Identities=17%  Similarity=0.224  Sum_probs=92.3

Q ss_pred             EEEEEECCHHHHHHHHHHHCCCCCCCCEEEEEECC---CCCCCCEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEEEC
Q ss_conf             03442079899999999853898721001311038---888760789999889899999987761188223899767885
Q gi|254781162|r   33 FFLERLEHDSSICAMHADSFGPGRFVRAAVLLREQ---GMHDLSLSFLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVH  109 (192)
Q Consensus        33 ~~~~R~e~~~di~ai~~~~fgpgr~~~~~~~lR~~---~~~~~~lslVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~  109 (192)
                      +-.+|.-+-.||.-|.++.- | -+.-.-.+-|+|   .+.+..+| |.+.||-|+||..+.|..  ..+.-.|+.|+|+
T Consensus       291 ~e~iR~At~~DvGGi~~LI~-P-LEeqGiLv~RsRe~LE~~I~~FS-v~e~dG~~~GCAALypya--~~~~GE~AClAv~  365 (439)
T TIGR01890       291 FESIREATIDDVGGILELIR-P-LEEQGILVRRSRELLEREIEEFS-VIEHDGLIIGCAALYPYA--EEDVGEMACLAVS  365 (439)
T ss_pred             HHHHHHHCCCCCCHHHHHCC-C-HHHCCEECCHHHHHHHHHHHHCE-EEECCCCCHHHHHCCCCC--CCCCCCEEEEECC
T ss_conf             89875311244100887435-1-34557310044787777530061-440176112121258876--3223301211217


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC--HHHHHHCCCEECCCCCE
Q ss_conf             111389958999999999996138847998408--65787429487463653
Q gi|254781162|r  110 PLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGD--IAYYSKLGFQAVPWKSL  159 (192)
Q Consensus       110 P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~--~~yY~rfGF~~~~~~~l  159 (192)
                      |+||+-|.|..|+.+..++||+.|...++++..  ..||.+.||..+....|
T Consensus       366 P~~~~GG~G~~LL~h~~~~Ar~~Gl~~LFvLtT~t~hWF~erGF~~a~vd~L  417 (439)
T TIGR01890       366 PEYRDGGRGERLLKHIEDRARQMGLSRLFVLTTRTEHWFRERGFQEASVDEL  417 (439)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCHHHHCEECCCCHHHHHHCCCCCCCHHCC
T ss_conf             6788888717899999998642251352000256134786548972664215


No 30 
>pfam08445 FR47 FR47-like protein. The members of this family are similar to the C-terminal region of the D. melanogaster hypothetical protein FR47. This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands.
Probab=98.88  E-value=1.4e-08  Score=70.08  Aligned_cols=74  Identities=20%  Similarity=0.371  Sum_probs=57.9

Q ss_pred             EEEEECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE--EC---HHHHHHCC
Q ss_conf             99998898999999877611882238997678851113899589999999999961388479984--08---65787429
Q gi|254781162|r   76 FLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLV--GD---IAYYSKLG  150 (192)
Q Consensus        76 lVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~--g~---~~yY~rfG  150 (192)
                      +.-.+.|++++.+..++.   +    .|+.+.|+|+|||+|+|+.|+++..+.+.++|......+  .+   ..+|+|+|
T Consensus         4 lf~~~~~el~aW~l~~~~---G----~i~~l~v~Pe~rgrG~G~~L~~~~~~~~~~~G~~~~l~V~~~N~~a~~lYeklG   76 (86)
T pfam08445         4 IYRGDTGELAAWCLRLPG---G----ELGALQTLPEHRRRGLGSRLVAALARGIAERGITPFAVVVAGNTPSRRLYEKLG   76 (86)
T ss_pred             EEECCCCCEEEEEEECCC---C----CEEEEEECHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCC
T ss_conf             787899989999998899---7----689999998983698899999999999997699469999879868999999869


Q ss_pred             CEECCC
Q ss_conf             487463
Q gi|254781162|r  151 FQAVPW  156 (192)
Q Consensus       151 F~~~~~  156 (192)
                      |+.+..
T Consensus        77 F~~v~~   82 (86)
T pfam08445        77 FRKIDE   82 (86)
T ss_pred             CEEEEE
T ss_conf             979146


No 31 
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=98.80  E-value=1.3e-07  Score=64.47  Aligned_cols=133  Identities=26%  Similarity=0.339  Sum_probs=80.8

Q ss_pred             CHHHHHHHHHHHCC-CCCC--CCEE-EEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCC
Q ss_conf             98999999998538-9872--1001-311038888760789999889899999987761188223899767885111389
Q gi|254781162|r   40 HDSSICAMHADSFG-PGRF--VRAA-VLLREQGMHDLSLSFLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNK  115 (192)
Q Consensus        40 ~~~di~ai~~~~fg-pgr~--~~~~-~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~  115 (192)
                      ...++.+|-+.+-. -|..  +|+. ..+|.... ...-.+++.++++|||+..+.+.......   ..-++|+|+||++
T Consensus        10 ~~~~v~~l~~~a~~~DGv~plsE~~ll~Lr~~~~-~~~~hl~~~~~~~~vGya~l~~~~~~~~~---~aElvVhP~~R~r   85 (292)
T TIGR03448        10 LRRDVRELLAAATAVDGVAPVSEQVLRGLREPGA-GHTRHLVAVDSDPIVGYANLVPARGTDPA---MAELVVHPAHRRR   85 (292)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCC-CCCEEEEEECCCEEEEEEEECCCCCCCCC---EEEEEECCCCCCC
T ss_conf             9999999999999842999755799964436888-86017999449868999996257888776---4789989000379


Q ss_pred             CHHHHHHHHHHHHHHHCCCCEEEEEEC----HHHHHHCCCEECCCC--------CEECCCCCCHHHEEEEECCCC
Q ss_conf             958999999999996138847998408----657874294874636--------536689999566698435778
Q gi|254781162|r  116 GIGRKLISMSVDAAEKKGSQVIVLVGD----IAYYSKLGFQAVPWK--------SLILPAPVDPNRVLFLPLVQN  178 (192)
Q Consensus       116 GiG~~Li~~~l~~a~~~g~~~v~l~g~----~~yY~rfGF~~~~~~--------~l~~p~pv~~~~~l~l~L~~~  178 (192)
                      |||++|++++++.+.  +...+...|+    ..+.+++||+++...        .+.+|.|..|+.+-..+..++
T Consensus        86 GiG~aLl~a~~~~~~--~~l~~WahG~~p~A~alA~~~G~~~~R~l~~Mr~~l~~~~~p~p~~p~Gv~lr~f~~~  158 (292)
T TIGR03448        86 GIGRALIRALLAKGG--GRLRVWAHGDLPAARALASRLGLVPTRELLQMRRPLRDLELPEPQVPDGVTVRAYVGA  158 (292)
T ss_pred             CHHHHHHHHHHHHCC--CCCEEEECCCCHHHHHHHHHCCCEEEEHHHHHHCCCCCCCCCCCCCCCCEEEECCCCC
T ss_conf             879999999997438--7732886599889999999779900132344305765567788889998688436787


No 32 
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=98.67  E-value=3.7e-08  Score=67.65  Aligned_cols=120  Identities=18%  Similarity=0.224  Sum_probs=86.4

Q ss_pred             CCCCCCCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEE--CC--CCEEEEEEEEECCCCCCCCHHHHHHHHHHH
Q ss_conf             38987210013110388887607899998898999999877611--88--223899767885111389958999999999
Q gi|254781162|r   52 FGPGRFVRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPISI--EK--ITGHLLGPIVVHPLYQNKGIGRKLISMSVD  127 (192)
Q Consensus        52 fgpgr~~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~--~~--~~~~~LgplaV~P~~rg~GiG~~Li~~~l~  127 (192)
                      +-|--..+..++.+.-+-+   =++|...+.++++.+...|...  ++  .+.-+++-|++.|+|||+|.-++|+.+.+.
T Consensus        21 ~k~~~~~~~~~f~kil~~~---n~~vi~~nqkl~s~L~i~~f~~~f~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sLr   97 (389)
T COG4552          21 WKPLVPTDGAVFVKILAEP---NSYVIYMNQKLASRLHIPPFIFWFGNQVLPTAGIAGVASAPTYRRRGALRALLAHSLR   97 (389)
T ss_pred             CCCCCCCHHHHHHHHCCCC---CCEEEEEHHHHHHCCCCCCHHEEECCEEEECCCEEEEEECHHHCCCCHHHHHHHHHHH
T ss_conf             0755401135664330577---6068863344531033564120167736311534778726523047189999999999


Q ss_pred             HHHHCCCCEEEEEE-CHHHHHHCCCEECCCCCEECCCCCCHHHEEEEEC
Q ss_conf             99613884799840-8657874294874636536689999566698435
Q gi|254781162|r  128 AAEKKGSQVIVLVG-DIAYYSKLGFQAVPWKSLILPAPVDPNRVLFLPL  175 (192)
Q Consensus       128 ~a~~~g~~~v~l~g-~~~yY~rfGF~~~~~~~l~~p~pv~~~~~l~l~L  175 (192)
                      ..+.+|+...+|.- .+.+|+||||+.+... ...+..++-..+.+.+-
T Consensus        98 e~~~kG~p~s~L~P~s~~iYrKfGye~asn~-~~~~~d~~~~~~~a~~p  145 (389)
T COG4552          98 EIARKGYPVSALHPFSGGIYRKFGYEYASNY-HELTFDVRKARFHADEP  145 (389)
T ss_pred             HHHHCCCEEEEECCCCHHHHHHCCCCCCCEE-EEEECCHHHHHHHCCCC
T ss_conf             9987697069963675445765063213348-99505548887612587


No 33 
>KOG2488 consensus
Probab=98.49  E-value=8e-07  Score=59.83  Aligned_cols=81  Identities=20%  Similarity=0.271  Sum_probs=63.7

Q ss_pred             EEEEECC-EEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE------EECHHHHHH
Q ss_conf             9999889-899999987761188223899767885111389958999999999996138847998------408657874
Q gi|254781162|r   76 FLCAEGK-RIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVL------VGDIAYYSK  148 (192)
Q Consensus        76 lVA~~~~-~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l------~g~~~yY~r  148 (192)
                      ++|.+++ .+||+.+|-=...-+.+.+-+--|-|.+.|||+|||+.|++.+...+.......|.|      .+...||.+
T Consensus        95 i~a~~~~~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~~a~~~~~~kVmLTVf~~N~~al~Fy~~  174 (202)
T KOG2488          95 ICAWNNKSKLVGFTMFRFTVDTGDPVLYCYEVQVASAYRGKGIGKFLLDTLEKLADSRHMRKVMLTVFSENIRALGFYHR  174 (202)
T ss_pred             EEEECCCCCEEEEEEEEEECCCCCEEEEEEEEEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHH
T ss_conf             99986888624688999870249869999987645666526858999999999888887665114443146504778997


Q ss_pred             CCCEECCC
Q ss_conf             29487463
Q gi|254781162|r  149 LGFQAVPW  156 (192)
Q Consensus       149 fGF~~~~~  156 (192)
                      +||.+.+.
T Consensus       175 ~gf~~~~~  182 (202)
T KOG2488         175 LGFVVDEE  182 (202)
T ss_pred             CCCCCCCC
T ss_conf             59624788


No 34 
>KOG4144 consensus
Probab=98.46  E-value=6.8e-08  Score=66.11  Aligned_cols=124  Identities=15%  Similarity=0.179  Sum_probs=76.2

Q ss_pred             EEEECCHHHHHHHH---HHHCCCCCCCCEEEEEECCCCCCCCEE--EEEE-------ECCEEEEEEEEEEEEE-------
Q ss_conf             44207989999999---985389872100131103888876078--9999-------8898999999877611-------
Q gi|254781162|r   35 LERLEHDSSICAMH---ADSFGPGRFVRAAVLLREQGMHDLSLS--FLCA-------EGKRIVGSVRMTPISI-------   95 (192)
Q Consensus        35 ~~R~e~~~di~ai~---~~~fgpgr~~~~~~~lR~~~~~~~~ls--lVA~-------~~~~IVG~i~~~pv~~-------   95 (192)
                      -||+--.+|.+.++   +..|-+ ...-+-.+.|++.-..++++  +.++       ..+.+||||.-|....       
T Consensus        13 ~irp~i~e~~q~~~~Lea~~FPe-~erasfeii~~r~i~~pevc~glf~~~~h~~~~~~~tLIghIigs~~~~E~lt~ES   91 (190)
T KOG4144          13 RIRPGIPESCQRRHTLEASEFPE-DERASFEIIRERFISVPEVCPGLFDEIRHFLTLCEGTLIGHIIGSLWDKERLTQES   91 (190)
T ss_pred             CCCCCCHHHHHHHHCCCCCCCCH-HHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHCCCCCEEHHHCCCCCCHHHHHHH
T ss_conf             57988868999874265133985-67778999999983453326113366776454411301000000567601201877


Q ss_pred             ------CCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCC-CCEEEEEE-CH--HHHHHCCCEECCCCCEE
Q ss_conf             ------88223899767885111389958999999999996138-84799840-86--57874294874636536
Q gi|254781162|r   96 ------EKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKG-SQVIVLVG-DI--AYYSKLGFQAVPWKSLI  160 (192)
Q Consensus        96 ------~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g-~~~v~l~g-~~--~yY~rfGF~~~~~~~l~  160 (192)
                            ++.. ..+-.|+|+|+||.+|.|..|+..-++..-.+- ...++|.. +|  +||+||||+.+....++
T Consensus        92 m~kh~s~g~n-i~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~pLvPFYEr~gFk~vgp~~~~  165 (190)
T KOG4144          92 MTKHRSGGHN-IHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHDPLVPFYERFGFKAVGPCAIT  165 (190)
T ss_pred             HHHHHCCCCC-EEEEEEEECHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCEEECCCCCC
T ss_conf             7654058840-3678887459898668631689999998626753121013345775316675074032464222


No 35 
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=98.41  E-value=1.4e-06  Score=58.47  Aligned_cols=80  Identities=18%  Similarity=0.280  Sum_probs=60.4

Q ss_pred             EEEECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE--ECH---HHHHHCCC
Q ss_conf             9998898999999877611882238997678851113899589999999999961388479984--086---57874294
Q gi|254781162|r   77 LCAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLV--GDI---AYYSKLGF  151 (192)
Q Consensus        77 VA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~--g~~---~yY~rfGF  151 (192)
                      --+++|+||......   ..+.....++-++++|+|||+|++++|+...-...-+.|...++.+  -+|   .-|+|.||
T Consensus       181 f~~~d~~iVa~A~t~---a~~~~~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~eGk~~~L~~~~~N~~A~~iY~riGF  257 (268)
T COG3393         181 FLEGDGKIVAKAETA---AENPAYAQINGVYTHPEYRGKGYATALVATLAAKLLAEGKIPCLFVNSDNPVARRIYQRIGF  257 (268)
T ss_pred             EECCCCCEEEEEECC---CCCCCCEEEEEEECCHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHCC
T ss_conf             982688389862005---66886168987871978726548999999999999857981489983478788999998097


Q ss_pred             EECCCCCE
Q ss_conf             87463653
Q gi|254781162|r  152 QAVPWKSL  159 (192)
Q Consensus       152 ~~~~~~~l  159 (192)
                      +.......
T Consensus       258 ~~~g~~~~  265 (268)
T COG3393         258 REIGEFRE  265 (268)
T ss_pred             EECCEEEE
T ss_conf             14241789


No 36 
>KOG3396 consensus
Probab=98.32  E-value=3.8e-06  Score=55.86  Aligned_cols=81  Identities=25%  Similarity=0.441  Sum_probs=63.0

Q ss_pred             EEEEEEE--CCEEEEEEEEEEE--EEC--CCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECH---H
Q ss_conf             7899998--8989999998776--118--82238997678851113899589999999999961388479984086---5
Q gi|254781162|r   74 LSFLCAE--GKRIVGSVRMTPI--SIE--KITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGDI---A  144 (192)
Q Consensus        74 lslVA~~--~~~IVG~i~~~pv--~~~--~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~~---~  144 (192)
                      .-.|.++  .++|||+..+.--  .+.  +..+. +..++|+++|||+++|+.|+...++.++..|+--++|-.+|   .
T Consensus        54 ~i~Vied~~s~~vigtatL~IE~KfIh~~g~rGh-iEDVVV~~~~rgk~LGkllv~~Lv~l~k~lgcYKi~LdC~~~nv~  132 (150)
T KOG3396          54 YIVVIEDKESEKVIGTATLFIERKFIHGCGSRGH-IEDVVVDSEYRGKQLGKLLVETLVDLAKSLGCYKIILDCDPKNVK  132 (150)
T ss_pred             EEEEEEECCCCEEEEEEEEEEEHHHHHCCCCCCC-EEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHH
T ss_conf             9999996786727888777776666650444575-147986754515678699999999998742827999963621014


Q ss_pred             HHHHCCCEECC
Q ss_conf             78742948746
Q gi|254781162|r  145 YYSKLGFQAVP  155 (192)
Q Consensus       145 yY~rfGF~~~~  155 (192)
                      ||+++||...+
T Consensus       133 FYeKcG~s~~~  143 (150)
T KOG3396         133 FYEKCGYSNAG  143 (150)
T ss_pred             HHHHCCCCCCC
T ss_conf             89973965542


No 37 
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family; InterPro: IPR005910   Histone acetylation is carried out by a class of enzymes known as histone acetyltransferases (HATs), which catalyse the transfer of an acetyl group from acetyl-CoA to the lysine E-amino groups on the N-terminal tails of histones . Early indication that HATs were involved in transcription came from the observation that in actively transcribed regions of chromatin, histones tend to be hyperacetylated, whereas in transcriptionally silent regions histones are hypoacetylated. The histone acetyltransferases are divided into five families. These include the Gcn5-related acetyltransferases (GNATs); the MYST (for 'MOZ, Ybf2/Sas3, Sas2 and Tip60)-related HATs; p300/CBP HATs; the general transcription factor HATs, which include the TFIID subunit TAF250; and the nuclear hormone-related HATs SRC1 and ACTR (SRC3). The GCN5-related N-acetyltransferase superfamily includes such enzymes as the histone acetyltransferases GCN5 and Hat1, the elongator complex subunit Elp3, the mediator-complex subunit Nut1, and Hpa2 .    Many GNATs share several functional domains, including an N-terminal region of variable length, an acetyltransferase domain that encompasses the conserved sequence motifs described above, a region that interacts with the coactivator Ada2, and a C-terminal bromodomain that is believed to interact with acetyl-lysine residues. Members of the GNAT family are important for the regulation of cell growth and development. In mice, knockouts of Gcn5L are embryonic lethal. Yeast Gcn5 is needed for normal progression through the G2M boundary and mitotic gene expression. The importance of GNATs is probably related to their role in transcription and DNA repair.   The yeast GCN5 (yGCN5) transcriptional coactivator functions as a histone acetyltransferase (HAT) to promote transcriptional activation. The crystal structure of the yeast histone acetyltransferase Hat1-acetyl coenzyme A (AcCoA) shows that Hat1 has an elongated, curved structure, and the AcCoA molecule is bound in a cleft on the concave surface of the protein, marking the active site of the enzyme. A channel of variable width and depth that runs across the protein is probably the binding site for the histone substrate . The central protein core associated with AcCoA binding that appears to be structurally conserved among a superfamily of N-acetyltransferases, including yeast histone acetyltransferase 1 and Serratia marcescens aminoglycoside 3-N-acetyltransferase .   The Saccharomyces cerevisiae member YPL086C has been characterised in vitro as an N-terminal acetyltransferase (2.3.1.48 from EC) for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases. In vivo, ELP3 gene deletion confers typical ELP phenotypes such as slow growth adaptation, slow gene activation, and temperature sensitivity. This suggests a role for the proteins as novel, tightly RNAPII-associated histone acetyltransferases in transcription of DNA packaged in chromatin ..
Probab=98.26  E-value=1.7e-06  Score=57.93  Aligned_cols=98  Identities=28%  Similarity=0.516  Sum_probs=70.2

Q ss_pred             CEEEEEECC----CCCCCCEEEEEEECCEEEEEEEEE----E-EE---ECC-CCE-----EEEE---EEEE---CCCCCC
Q ss_conf             001311038----888760789999889899999987----7-61---188-223-----8997---6788---511138
Q gi|254781162|r   59 RAAVLLREQ----GMHDLSLSFLCAEGKRIVGSVRMT----P-IS---IEK-ITG-----HLLG---PIVV---HPLYQN  114 (192)
Q Consensus        59 ~~~~~lR~~----~~~~~~lslVA~~~~~IVG~i~~~----p-v~---~~~-~~~-----~~Lg---plaV---~P~~rg  114 (192)
                      ++...+|+.    .-....|||.-.++|.|||.+++-    | ..   .+. .++     +..|   ||.=   .-+||.
T Consensus       441 e~v~L~ve~Y~A~GG~E~FlS~Ed~~~D~LiGFlRLR~P~e~ya~r~e~d~~~TAlvRELHVYG~~vP~g~D~~~~~~QH  520 (573)
T TIGR01211       441 ENVELIVEEYAASGGREIFLSYEDPKNDILIGFLRLRFPSEPYAHRKEVDAQRTALVRELHVYGSEVPIGEDRGEDEWQH  520 (573)
T ss_pred             CCEEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             01377763101488568987731100040021000068887213455430576103210321057212567787776444


Q ss_pred             CCHHHHHHHHHHHHHHHC-CCCEEEEE---ECHHHHHH-CCCEECCC
Q ss_conf             995899999999999613-88479984---08657874-29487463
Q gi|254781162|r  115 KGIGRKLISMSVDAAEKK-GSQVIVLV---GDIAYYSK-LGFQAVPW  156 (192)
Q Consensus       115 ~GiG~~Li~~~l~~a~~~-g~~~v~l~---g~~~yY~r-fGF~~~~~  156 (192)
                      ||+|++||+.|...|++. |...|.|+   |.=+||.| |||+....
T Consensus       521 rGyG~~Ll~EAEriA~EefG~~KIlVISGiGVReYYrKqlGY~~~GP  567 (573)
T TIGR01211       521 RGYGRRLLEEAERIAKEEFGLEKILVISGIGVREYYRKQLGYEKDGP  567 (573)
T ss_pred             CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHCCCCCCCC
T ss_conf             42557899999998563069701678514101000022326321377


No 38 
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=98.24  E-value=6.8e-05  Score=48.53  Aligned_cols=121  Identities=16%  Similarity=0.183  Sum_probs=80.9

Q ss_pred             EEEEECCHHHHHHHHHHH------C---CCCCCC----CEEEEE-----ECCCCCCCCEEEEEE--ECCEEEEEEEEEEE
Q ss_conf             344207989999999985------3---898721----001311-----038888760789999--88989999998776
Q gi|254781162|r   34 FLERLEHDSSICAMHADS------F---GPGRFV----RAAVLL-----REQGMHDLSLSFLCA--EGKRIVGSVRMTPI   93 (192)
Q Consensus        34 ~~~R~e~~~di~ai~~~~------f---gpgr~~----~~~~~l-----R~~~~~~~~lslVA~--~~~~IVG~i~~~pv   93 (192)
                      +.+|+=+++|.+++.+..      +   -|.+..    ......     .+.......+.|+..  ++++|||.|.++.+
T Consensus        18 L~LR~~~~~Da~~l~~~~~~~r~~l~~w~p~~d~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~k~~~~liG~i~l~~i   97 (194)
T PRK10809         18 LVVRLVHERDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFGLLDPEEKEIIGVANFSNV   97 (194)
T ss_pred             EEEECCCHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEEEEC
T ss_conf             89978998999999999971875554847667702158899999999999998669817999999899979999998742


Q ss_pred             EECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHH-HCCCCEEEEEECH------HHHHHCCCEECC
Q ss_conf             1188223899767885111389958999999999996-1388479984086------578742948746
Q gi|254781162|r   94 SIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAE-KKGSQVIVLVGDI------AYYSKLGFQAVP  155 (192)
Q Consensus        94 ~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~-~~g~~~v~l~g~~------~yY~rfGF~~~~  155 (192)
                      ..+......+| -.++|+|||+|+++.-++.+++.+- ..+...|...-+|      ...+|.||+...
T Consensus        98 ~~~~~~~~eIG-Y~l~~~~~GkGyatEA~~ali~~aF~~l~lhRIea~~~~~N~~S~rvleklGF~~EG  165 (194)
T PRK10809         98 VRGSFHACYLG-YSIGQKWQGQGLMFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLGFEKEG  165 (194)
T ss_pred             CCCCCCEEEEE-EEECHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHCCCEEEE
T ss_conf             57765168899-999888948888999999999999873795389564322287753999987996888


No 39 
>KOG3235 consensus
Probab=98.16  E-value=8.2e-06  Score=53.92  Aligned_cols=120  Identities=21%  Similarity=0.327  Sum_probs=74.5

Q ss_pred             EEEEECCHHHHHHHHHHHC--CCCCCCCEEEEEECCCCCCCCEEEEEE-ECCEEEEEEEEEEEEE--CCCC--EEEEEEE
Q ss_conf             3442079899999999853--898721001311038888760789999-8898999999877611--8822--3899767
Q gi|254781162|r   34 FLERLEHDSSICAMHADSF--GPGRFVRAAVLLREQGMHDLSLSFLCA-EGKRIVGSVRMTPISI--EKIT--GHLLGPI  106 (192)
Q Consensus        34 ~~~R~e~~~di~ai~~~~f--gpgr~~~~~~~lR~~~~~~~~lslVA~-~~~~IVG~i~~~pv~~--~~~~--~~~Lgpl  106 (192)
                      |-||.-+..|+-...+...  -|..+--..+.  -....-+.+||||+ .+|+|||++.- .+..  +..+  +. +-++
T Consensus         2 m~iR~ar~~DL~~mQ~~Nl~~lpENyqmkyyl--yh~lswp~lSyVA~D~~gkiVGYvlA-kmee~p~~~~~hGh-ItSl   77 (193)
T KOG3235           2 MNIRRARPDDLLEMQHCNLLNLPENYQMKYYL--YHGLSWPQLSYVAEDENGKIVGYVLA-KMEEDPDDEPPHGH-ITSL   77 (193)
T ss_pred             CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH--HHHCCCCCCEEEEECCCCCEEEEEEE-EHHHCCCCCCCCCE-EEEE
T ss_conf             56345888888776643433682777478899--86226655347877589968987601-12306567898870-6876


Q ss_pred             EECCCCCCCCHHHHHHHHHHHHHHH-CCCCEEEEE---E---CHHHHH-HCCCEECCCC
Q ss_conf             8851113899589999999999961-388479984---0---865787-4294874636
Q gi|254781162|r  107 VVHPLYQNKGIGRKLISMSVDAAEK-KGSQVIVLV---G---DIAYYS-KLGFQAVPWK  157 (192)
Q Consensus       107 aV~P~~rg~GiG~~Li~~~l~~a~~-~g~~~v~l~---g---~~~yY~-rfGF~~~~~~  157 (192)
                      +|.-+||+.||+++||..+..+..+ .+...+.|.   +   +..+|. .+||+.....
T Consensus        78 aV~rs~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~LY~~tl~F~v~eve  136 (193)
T KOG3235          78 AVKRSYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALHLYKNTLGFVVCEVE  136 (193)
T ss_pred             EEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHHCCCEEEEECC
T ss_conf             53246887618999999999999986353388886411068888766613141886136


No 40 
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=98.13  E-value=7.3e-06  Score=54.21  Aligned_cols=80  Identities=25%  Similarity=0.418  Sum_probs=58.2

Q ss_pred             EEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEE-EEEEC----HHHHHHCCCEECCCCCEECCCCCCHHHEEEEE
Q ss_conf             38997678851113899589999999999961388479-98408----65787429487463653668999956669843
Q gi|254781162|r  100 GHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVI-VLVGD----IAYYSKLGFQAVPWKSLILPAPVDPNRVLFLP  174 (192)
Q Consensus       100 ~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v-~l~g~----~~yY~rfGF~~~~~~~l~~p~pv~~~~~l~l~  174 (192)
                      ++=+-.+||||++|++|||++|++..++.++ ++++.+ +-+|.    ..|+.|-||.++.-....-+.--.-..+|.+|
T Consensus       531 G~RIvRIAvhPe~q~~GiGsrlL~~l~~~a~-~~~DwlgvsFG~t~~L~rFW~rnGF~pVhls~~rn~~SGeys~i~lkp  609 (758)
T COG1444         531 GWRIVRIAVHPELQRMGIGSRLLALLIEEAR-KGLDWLGVSFGYTEELLRFWLRNGFVPVHLSPTRNASSGEYTAIVLKP  609 (758)
T ss_pred             CEEEEEEEECHHHHHCCHHHHHHHHHHHHHH-CCCCEEEECCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEEEC
T ss_conf             1268888708878635888999999999984-589889745678889999999759079873686676778646898854


Q ss_pred             CCCCCC
Q ss_conf             577810
Q gi|254781162|r  175 LVQNVA  180 (192)
Q Consensus       175 L~~~~l  180 (192)
                      |.+.+-
T Consensus       610 Ls~~~~  615 (758)
T COG1444         610 LSDAGK  615 (758)
T ss_pred             CCHHHH
T ss_conf             887799


No 41 
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=98.10  E-value=4.1e-05  Score=49.80  Aligned_cols=122  Identities=12%  Similarity=0.057  Sum_probs=79.5

Q ss_pred             CEEEEEECCHHHHHHHHHHH------CCC------CCC----CCEEEE-EECCCCCCCCEEEEEEECCEEEEEEEEEEEE
Q ss_conf             20344207989999999985------389------872----100131-1038888760789999889899999987761
Q gi|254781162|r   32 AFFLERLEHDSSICAMHADS------FGP------GRF----VRAAVL-LREQGMHDLSLSFLCAEGKRIVGSVRMTPIS   94 (192)
Q Consensus        32 ~~~~~R~e~~~di~ai~~~~------fgp------gr~----~~~~~~-lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~   94 (192)
                      -.+..|+=+.+|.++++++.      +.+      ...    ++..+. ..........+.|+...++++||.|.+..+.
T Consensus         9 erl~LR~~~~~Da~~L~~li~~nr~~L~~wlpW~~~~~s~~d~~~~i~~~~~~~~~g~~~~f~I~~~~~liG~i~l~~i~   88 (179)
T PRK10151          9 ESLELHAVDESHVTPLHQLVCKNKTWLQQSLNWPQYVQSEEDTRKTVQGNVMLHQRGYAKMFLIFKEDELIGVLSFNRIE   88 (179)
T ss_pred             CCEEEEECCHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEEEEEE
T ss_conf             99799808888999999999967898637899999889999999999999999971867489999999899999999970


Q ss_pred             ECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHH-HCCCCEEEEEE---C---HHHHHHCCCEECC
Q ss_conf             188223899767885111389958999999999996-13884799840---8---6578742948746
Q gi|254781162|r   95 IEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAE-KKGSQVIVLVG---D---IAYYSKLGFQAVP  155 (192)
Q Consensus        95 ~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~-~~g~~~v~l~g---~---~~yY~rfGF~~~~  155 (192)
                      .. .....+| ..+.|+|||+|++++-++..++.+- +.+...+....   +   ....+|.||+...
T Consensus        89 ~~-~~~aeiG-Ywl~~~~~GkG~~tea~~~li~~~f~~l~l~Ri~~~~~~~N~~S~~v~ek~Gf~~EG  154 (179)
T PRK10151         89 PL-NKTAYIG-YWLDESHQGQGIISQSLQALIHHYAQSGELRRFVIKCRVDNPASNQVALRNGFILEG  154 (179)
T ss_pred             CC-CCEEEEE-EEECHHHCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHCCCEEEE
T ss_conf             56-6769999-998877748968999999999999972891799999918998999999988999999


No 42 
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase; InterPro: IPR012772    This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analogous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.; GO: 0008415 acyltransferase activity, 0019491 ectoine biosynthetic process.
Probab=98.08  E-value=1.2e-05  Score=53.02  Aligned_cols=80  Identities=19%  Similarity=0.233  Sum_probs=56.2

Q ss_pred             EEEEEEE-CCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCE--EEEE-----EC---
Q ss_conf             7899998-89899999987761188223899767885111389958999999999996138847--9984-----08---
Q gi|254781162|r   74 LSFLCAE-GKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQV--IVLV-----GD---  142 (192)
Q Consensus        74 lslVA~~-~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~--v~l~-----g~---  142 (192)
                      =|.||+. ||+|+|.|.-.- .-+..+.+.+..|||++..||+|++++|+++.+++-.......  -.|-     ++   
T Consensus        40 TsiVae~egg~i~GFV~GY~-~P~~Pd~LFVWQVAV~~~~RG~GLA~rll~all~R~~~~~v~~~I~~~EtTiTPdN~AS  118 (162)
T TIGR02406        40 TSIVAEEEGGEIVGFVSGYL-KPDRPDVLFVWQVAVDPKARGKGLASRLLEALLERVALERVRHCIQAVETTITPDNEAS  118 (162)
T ss_pred             CEEEEECCCCEEEEEEEEEE-CCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH
T ss_conf             22765379990335886212-67999788898754271314316899999997610333137982104662107666689


Q ss_pred             HHHHHHCCCEEC
Q ss_conf             657874294874
Q gi|254781162|r  143 IAYYSKLGFQAV  154 (192)
Q Consensus       143 ~~yY~rfGF~~~  154 (192)
                      -.++++++=+.-
T Consensus       119 ~aLF~~La~~~~  130 (162)
T TIGR02406       119 RALFKKLARRRG  130 (162)
T ss_pred             HHHHHHHHHHCC
T ss_conf             999998765428


No 43 
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=98.02  E-value=0.00015  Score=46.56  Aligned_cols=86  Identities=21%  Similarity=0.230  Sum_probs=61.3

Q ss_pred             CCEEEEEEEC--CEEEEEEEEEEEEE-CCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH-CCCCEEEEEEC-----
Q ss_conf             6078999988--98999999877611-882238997678851113899589999999999961-38847998408-----
Q gi|254781162|r   72 LSLSFLCAEG--KRIVGSVRMTPISI-EKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEK-KGSQVIVLVGD-----  142 (192)
Q Consensus        72 ~~lslVA~~~--~~IVG~i~~~pv~~-~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~-~g~~~v~l~g~-----  142 (192)
                      ..+.++...+  +++||.+.++.... .......+| ....|+|+|+|+|+..++..++.+-. .+...+...-+     
T Consensus        65 ~~~~~~~~~~~~~~~iG~~~~~~~~~~~~~~~~~ig-~~l~~~~~g~G~~tea~~~~l~~~f~~~~~~rv~~~~~~~N~~  143 (187)
T COG1670          65 GAFAIELKATGDGELIGVIGLSDIDRAANGDLAEIG-YWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEA  143 (187)
T ss_pred             CEEEEEEECCCCCCEEEEEEEEECCCCCCCCCEEEE-EEECHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH
T ss_conf             459999802788708999997863465678857999-9999666389269999999999975007965899998889999


Q ss_pred             -HHHHHHCCCEECCCCC
Q ss_conf             -6578742948746365
Q gi|254781162|r  143 -IAYYSKLGFQAVPWKS  158 (192)
Q Consensus       143 -~~yY~rfGF~~~~~~~  158 (192)
                       ...|+|.||+......
T Consensus       144 S~rv~ek~Gf~~~g~~~  160 (187)
T COG1670         144 SIRVYEKLGFRLEGELR  160 (187)
T ss_pred             HHHHHHHCCCEEECEEE
T ss_conf             99999987999925241


No 44 
>KOG3234 consensus
Probab=98.02  E-value=2e-05  Score=51.65  Aligned_cols=142  Identities=15%  Similarity=0.118  Sum_probs=85.3

Q ss_pred             EEECCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEE-CCEEEEEEEEEEEEECCCCEEE-EEEEEECCCCC
Q ss_conf             420798999999998538987210013110388887607899998-8989999998776118822389-97678851113
Q gi|254781162|r   36 ERLEHDSSICAMHADSFGPGRFVRAAVLLREQGMHDLSLSFLCAE-GKRIVGSVRMTPISIEKITGHL-LGPIVVHPLYQ  113 (192)
Q Consensus        36 ~R~e~~~di~ai~~~~fgpgr~~~~~~~lR~~~~~~~~lslVA~~-~~~IVG~i~~~pv~~~~~~~~~-LgplaV~P~~r  113 (192)
                      +|+=...|+....+..+-|-.++-.--..-.--..-++++.||+. +++|-|+|+- ++.-....+++ ...|+|.|+||
T Consensus         4 ~r~f~~~Dlf~fNninLDpltEt~~~~Fyl~yl~~~pe~~~~a~~p~~~imgyimg-k~Eg~~~~wh~HvTAltVap~~R   82 (173)
T KOG3234           4 IRPFTPQDLFKFNNINLDPLTETFPISFYLIYLAIWPEDFIVAEAPTGEIMGYIMG-KVEGKDTEWHGHVTALTVAPDYR   82 (173)
T ss_pred             CCCCCHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHCHHHHEECCCCCCCEEEEEEE-ECCCCCCCEEEEEEEEEECHHHH
T ss_conf             55366788775356214634134660005999875758727311799846899854-20466751366789887354688


Q ss_pred             CCCHHHHHHHHHHHHHHHCCCCEEEE---EEC---HHHHHHCCCEECCCC-CEECCCCCCHHHEEEEECCCC
Q ss_conf             89958999999999996138847998---408---657874294874636-536689999566698435778
Q gi|254781162|r  114 NKGIGRKLISMSVDAAEKKGSQVIVL---VGD---IAYYSKLGFQAVPWK-SLILPAPVDPNRVLFLPLVQN  178 (192)
Q Consensus       114 g~GiG~~Li~~~l~~a~~~g~~~v~l---~g~---~~yY~rfGF~~~~~~-~l~~p~pv~~~~~l~l~L~~~  178 (192)
                      +.|+|+.||....+-....+.-.+-|   .++   +++|+++|+..-.+- +...-||-++.+=|.++|.-.
T Consensus        83 rl~la~~lm~~led~~d~~~a~fvDLfVr~sN~iAI~mYkkLGY~~YR~Vi~YY~~g~deda~dMRKalSrD  154 (173)
T KOG3234          83 RLGLAAKLMDTLEDVSDVDNAYFVDLFVRVSNQIAIDMYKKLGYSVYRTVIEYYSVGPDEDAYDMRKALSRD  154 (173)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHCCCEEEEEEEEEECCCCCCCHHHHHHHHCCC
T ss_conf             877999999999998875321231032000654589999852936887654665038873067666555037


No 45 
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=97.99  E-value=4.2e-05  Score=49.75  Aligned_cols=81  Identities=22%  Similarity=0.410  Sum_probs=60.7

Q ss_pred             CEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHH-HHCCCCEEEEE---EC---HHH
Q ss_conf             078999988989999998776118822389976788511138995899999999999-61388479984---08---657
Q gi|254781162|r   73 SLSFLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAA-EKKGSQVIVLV---GD---IAY  145 (192)
Q Consensus        73 ~lslVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a-~~~g~~~v~l~---g~---~~y  145 (192)
                      ..-|+.+.+++.||.|.++.+..... ...+| +...| ++++|+|+.++..+++.| ...+...+.+.   .+   ..+
T Consensus        51 ~~~~ii~~~~~~IG~i~l~~id~~~~-~ae~g-i~~~~-~~~~G~g~~~~~~~l~~aF~~l~l~rl~~~v~~~N~~si~l  127 (156)
T TIGR03585        51 RRYWIVCQESRPIGVISFTDINLVHK-SAFWG-IYANP-FCKPGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKL  127 (156)
T ss_pred             CEEEEEEECCCEEEEEEEEECCCCCC-EEEEE-EEECH-HHCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCHHHHHH
T ss_conf             38999997992899998874030039-89999-98222-10257799999999999987569269999962568999999


Q ss_pred             HHHCCCEECCC
Q ss_conf             87429487463
Q gi|254781162|r  146 YSKLGFQAVPW  156 (192)
Q Consensus       146 Y~rfGF~~~~~  156 (192)
                      |+++||+....
T Consensus       128 ~ek~GF~~EG~  138 (156)
T TIGR03585       128 YEKFGFEREGV  138 (156)
T ss_pred             HHHCCCEEEEE
T ss_conf             99789999999


No 46 
>KOG3138 consensus
Probab=97.98  E-value=1.5e-05  Score=52.46  Aligned_cols=142  Identities=21%  Similarity=0.201  Sum_probs=81.3

Q ss_pred             EEEEECCHHHHHHH---HHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEECCC-------CEEEE
Q ss_conf             34420798999999---998538987210013110388887607899998898999999877611882-------23899
Q gi|254781162|r   34 FLERLEHDSSICAM---HADSFGPGRFVRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPISIEKI-------TGHLL  103 (192)
Q Consensus        34 ~~~R~e~~~di~ai---~~~~fgpgr~~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~~~~-------~~~~L  103 (192)
                      +.+|.-++.++..+   +..+|- -.+...-+..-..+.   .+.=.|.-++..||-++.-.......       +...+
T Consensus        17 ~~l~~it~~nl~~~~~l~~~~fP-~~y~~kfy~~~~~~~---~~~~~A~~~~~~v~a~~~k~~~~~~~~~r~~~~~~~yi   92 (187)
T KOG3138          17 IELRLITPNNLKQLKQLNEDIFP-ISYVDKFYPDVLSNG---DLTQLAYYNEIAVGAVACKLIKFVQNAKRLFGNRVIYI   92 (187)
T ss_pred             EEECCCCCCHHHHHHHHHCCCCC-CCHHHHHHHHHHHCC---CHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHCCCEEEE
T ss_conf             35436783067899887202167-635777778887157---77774111014530013310122456665403321477


Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHHHCC-CCEEEEE----E--CHHHHHHCCCEECCCCC-EECCCCCCHHHEEEEEC
Q ss_conf             767885111389958999999999996138-8479984----0--86578742948746365-36689999566698435
Q gi|254781162|r  104 GPIVVHPLYQNKGIGRKLISMSVDAAEKKG-SQVIVLV----G--DIAYYSKLGFQAVPWKS-LILPAPVDPNRVLFLPL  175 (192)
Q Consensus       104 gplaV~P~~rg~GiG~~Li~~~l~~a~~~g-~~~v~l~----g--~~~yY~rfGF~~~~~~~-l~~p~pv~~~~~l~l~L  175 (192)
                      -.+.|+|.||.+|||+.|+..+.+.+.... +..+.+.    +  ...||+++||+.+..-. ...+.-..+..+|.++|
T Consensus        93 ~~Lgvl~~yR~~gIGs~Ll~~~~~~~~~~~~~~~v~lHv~~~n~~ai~~Y~~~gF~~~~~~~~~y~~~~~~~~~~l~~~~  172 (187)
T KOG3138          93 LSLGVLPRYRNKGIGSKLLEFVKKYCSEAHQCRRVYLHVQAVNESAIEFYEKRGFEIVERLKNYYSILGPPDDSFLRKLL  172 (187)
T ss_pred             EEECCCHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHE
T ss_conf             76224387774254878899999887505645517999971797388998834956740254421036672055653220


Q ss_pred             CCCC
Q ss_conf             7781
Q gi|254781162|r  176 VQNV  179 (192)
Q Consensus       176 ~~~~  179 (192)
                      .-+.
T Consensus       173 ~~~~  176 (187)
T KOG3138         173 IHGS  176 (187)
T ss_pred             ECCC
T ss_conf             1488


No 47 
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=97.93  E-value=4.5e-05  Score=49.60  Aligned_cols=76  Identities=16%  Similarity=0.362  Sum_probs=56.6

Q ss_pred             CCCEEEEEEE-CCEEEEEEEEEEEEECCC---CEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHH
Q ss_conf             7607899998-898999999877611882---238997678851113899589999999999961388479984086578
Q gi|254781162|r   71 DLSLSFLCAE-GKRIVGSVRMTPISIEKI---TGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGDIAYY  146 (192)
Q Consensus        71 ~~~lslVA~~-~~~IVG~i~~~pv~~~~~---~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~~~yY  146 (192)
                      .+...+.|.. ++++||.|.+-.. .+..   .+=-+| -+|.|+.||+|+++++++.+++.|++.|..-|+++.|.+.-
T Consensus        66 V~~~~y~~v~~d~~ivG~i~lRh~-Ln~~ll~~gGHIG-Y~VrPseR~KGYA~emLkl~L~~ar~lgi~~Vlvtcd~dN~  143 (174)
T COG3981          66 VPASTYWAVDEDGQIVGFINLRHQ-LNDFLLEEGGHIG-YSVRPSERRKGYAKEMLKLALEKARELGIKKVLVTCDKDNI  143 (174)
T ss_pred             EECEEEEEEECCCCEEEEEEEEEE-CCHHHHHCCCCCC-CEECHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
T ss_conf             303368999338808999986210-0568886278564-11476352467899999999999998499769998479981


Q ss_pred             HH
Q ss_conf             74
Q gi|254781162|r  147 SK  148 (192)
Q Consensus       147 ~r  148 (192)
                      ..
T Consensus       144 AS  145 (174)
T COG3981         144 AS  145 (174)
T ss_pred             HH
T ss_conf             11


No 48 
>cd02169 Citrate_lyase_ligase Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=97.86  E-value=0.00011  Score=47.34  Aligned_cols=69  Identities=23%  Similarity=0.473  Sum_probs=58.8

Q ss_pred             EECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECH---HHHHHCCCEECC
Q ss_conf             98898999999877611882238997678851113899589999999999961388479984086---578742948746
Q gi|254781162|r   79 AEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGDI---AYYSKLGFQAVP  155 (192)
Q Consensus        79 ~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~~---~yY~rfGF~~~~  155 (192)
                      .++++|||+-.+.        +-.|-.+||+|++||.|+..+|+.+.++.+.++|..-.+++..|   .+++..||..+.
T Consensus        12 d~~~~lvatGs~~--------gnvlKcvAV~~~~qg~gl~~~lvs~L~~~~~~~G~~h~FvfTKp~~~~~F~~lGF~~ia   83 (296)
T cd02169          12 DDAGNLIATGSLA--------GNILKCVAVSPKYQGEGLLLKLVSELINRAFERGIFHLFVFTKPENVKFFSSLGFKELA   83 (296)
T ss_pred             ECCCCEEEEEECC--------CCEEEEEEECHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCEEEE
T ss_conf             0799789973021--------47879999872105864799999999999997699648999371057778758977988


No 49 
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=97.84  E-value=7e-05  Score=48.45  Aligned_cols=67  Identities=15%  Similarity=0.251  Sum_probs=55.1

Q ss_pred             CCEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             6078999988989999998776118822389976788511138995899999999999613884799840
Q gi|254781162|r   72 LSLSFLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVG  141 (192)
Q Consensus        72 ~~lslVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g  141 (192)
                      ....++...+|..+|.+.+++.   +.+..-+---.|.+++||||+|++|++++++.||+.|+..+=+-.
T Consensus        14 ~~~~y~~~~~G~~~~e~~y~~~---~~~~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~~g~kiiP~Cs   80 (99)
T COG2388          14 ENGRYVLTDEGEVIGEATYYDR---GENLIIIDHTYVPDELRGQGIAQKLVEKALEEAREAGLKIIPLCS   80 (99)
T ss_pred             CCEEEEEECCCCEEEEEEEECC---CCCEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHCCCEECCCCH
T ss_conf             7518999049938878888417---998799853768988858747999999999999981985733663


No 50 
>pfam00765 Autoind_synth Autoinducer synthetase.
Probab=97.55  E-value=0.0021  Score=39.85  Aligned_cols=108  Identities=16%  Similarity=0.051  Sum_probs=74.3

Q ss_pred             ECCCCCCCCEEEEEEECCEEEEEEEEEEEEE------------C------CCCEEEEEEEEECCCCCCC-C-----HHHH
Q ss_conf             0388887607899998898999999877611------------8------8223899767885111389-9-----5899
Q gi|254781162|r   65 REQGMHDLSLSFLCAEGKRIVGSVRMTPISI------------E------KITGHLLGPIVVHPLYQNK-G-----IGRK  120 (192)
Q Consensus        65 R~~~~~~~~lslVA~~~~~IVG~i~~~pv~~------------~------~~~~~~LgplaV~P~~rg~-G-----iG~~  120 (192)
                      +++-+.....-+++.++|+++|+.++.|..-            .      +.+.+.+..++|+++.... +     +...
T Consensus        37 ~DqyD~~~~~Yll~~~~g~v~g~~RLlpTt~p~ML~d~Fp~ll~~~~~P~~~~iwE~SRf~Vd~~~~~~~~~~~~~~~~~  116 (182)
T pfam00765        37 FDEYDNLNTTYLLGIKDGRVVCSVRFIETKYPNMITGTFSSYFDDISLPESGNYIESSRFFVDKARARGLLGNLAPISLM  116 (182)
T ss_pred             CCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCHHHCCCHHHCCCCCCCCCCCEEEECEEEECCCCCCCCCCCCCHHHHH
T ss_conf             55789999869999989989999813788995524210176628999999999899740379675554444452779999


Q ss_pred             HHHHHHHHHHHCCCCEEEEEECH---HHHHHCCCEECCCCCEECCCCCCHHHEEEEEC
Q ss_conf             99999999961388479984086---57874294874636536689999566698435
Q gi|254781162|r  121 LISMSVDAAEKKGSQVIVLVGDI---AYYSKLGFQAVPWKSLILPAPVDPNRVLFLPL  175 (192)
Q Consensus       121 Li~~~l~~a~~~g~~~v~l~g~~---~yY~rfGF~~~~~~~l~~p~pv~~~~~l~l~L  175 (192)
                      |+...++.|...|...++.+.++   ..|.|.||...+   +..|-.+..+...++-+
T Consensus       117 L~~~~~~~a~~~Gi~~~v~V~~~~~~rilrr~G~~~~~---lG~p~~~~g~~~vA~~i  171 (182)
T pfam00765       117 LFLSMINYARASGYDGIYTIVSHPMLRILKRSGWPISV---LGEGLSEKNERIYLLHL  171 (182)
T ss_pred             HHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCEEE---CCCCEEECCEEEEEEEE
T ss_conf             99999999998799889999768999999986995598---88886679848999997


No 51 
>PHA00673 acetyltransferase domain containing protein
Probab=97.50  E-value=0.00051  Score=43.44  Aligned_cols=83  Identities=17%  Similarity=0.258  Sum_probs=61.2

Q ss_pred             CEEEEEEECCEEEEEEEEEEEEECCCCEEE---EEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECH-----H
Q ss_conf             078999988989999998776118822389---97678851113899589999999999961388479984086-----5
Q gi|254781162|r   73 SLSFLCAEGKRIVGSVRMTPISIEKITGHL---LGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGDI-----A  144 (192)
Q Consensus        73 ~lslVA~~~~~IVG~i~~~pv~~~~~~~~~---LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~~-----~  144 (192)
                      -.-|-|.+|+++||++.+.-....-..+..   -..+.|+++||+-|.|-+|++++.+.+++.|+..+.+.+.+     .
T Consensus        55 ~~~l~a~q~d~LIGf~~llVT~~pHy~g~~i~t~es~fV~~eHR~ggaGlkLlr~te~~A~~LGa~~ll~sa~~~~~Ls~  134 (154)
T PHA00673         55 AHFLGVFRGEELVGFACLLVTPVPHFKGQLIGTTESIFVAAAHRPGGAGMALLRATEALARDLGATGLYVSGPTEGRLVQ  134 (154)
T ss_pred             EEEEEECCCCEEEEEEEEECCCCCCCCCCEEECCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHH
T ss_conf             37875212871466544421367632477751000257746443886168999999999986087369995699981412


Q ss_pred             HHHHCCCEECC
Q ss_conf             78742948746
Q gi|254781162|r  145 YYSKLGFQAVP  155 (192)
Q Consensus       145 yY~rfGF~~~~  155 (192)
                      .-.+.||.+..
T Consensus       135 ~Lp~~~y~~tN  145 (154)
T PHA00673        135 LLPAAGYRETN  145 (154)
T ss_pred             CCCCCCCCCCC
T ss_conf             12534776466


No 52 
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase; InterPro: IPR012752    This entry represents the WecD protein (formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetyltransferases..
Probab=97.46  E-value=0.00014  Score=46.68  Aligned_cols=118  Identities=19%  Similarity=0.323  Sum_probs=80.8

Q ss_pred             EEEEECCHHHHHHHHHHH---CCCCCCC------------CEEEE-EECCCCCCCCEEEEEEE-CCEEEEEEEEEEEEEC
Q ss_conf             344207989999999985---3898721------------00131-10388887607899998-8989999998776118
Q gi|254781162|r   34 FLERLEHDSSICAMHADS---FGPGRFV------------RAAVL-LREQGMHDLSLSFLCAE-GKRIVGSVRMTPISIE   96 (192)
Q Consensus        34 ~~~R~e~~~di~ai~~~~---fgpgr~~------------~~~~~-lR~~~~~~~~lslVA~~-~~~IVG~i~~~pv~~~   96 (192)
                      ...|.-++.||-+|.+++   |+--||.            ++..+ .--...+|-. ||+.++ .|.+.|+|.+-.....
T Consensus        54 y~~rvAte~DIPaLR~~As~aFAlSRFRaPWY~p~dSgRFYA~WvEnAV~GTFDHq-CL~~~da~g~p~G~VtLR~L~d~  132 (201)
T TIGR02382        54 YSLRVATEADIPALRDVASAAFALSRFRAPWYDPEDSGRFYAQWVENAVLGTFDHQ-CLLLRDAAGDPRGYVTLRELDDS  132 (201)
T ss_pred             CHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCH-HHHHHCCCCCCEEEEEEEECCCC
T ss_conf             02000033030689999999986410588888824232138888886505676401-35222447794046874004787


Q ss_pred             CCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE---EEC---HHHHHHCCCEECC
Q ss_conf             8223899767885111389958999999999996138847998---408---6578742948746
Q gi|254781162|r   97 KITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVL---VGD---IAYYSKLGFQAVP  155 (192)
Q Consensus        97 ~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l---~g~---~~yY~rfGF~~~~  155 (192)
                      ...   +|=|+|-|--+-||||.+||+.+.++|+.+|...+-+   +|+   ...|=|-|=..-+
T Consensus       133 dAR---IGLLav~PG~~~rGiG~~LM~~A~~Wc~~~Gl~rLRVATQ~gN~AALrlYirsGA~iES  194 (201)
T TIGR02382       133 DAR---IGLLAVFPGVTIRGIGARLMALAKAWCRRRGLIRLRVATQMGNVAALRLYIRSGASIES  194 (201)
T ss_pred             CCC---EECCCCCCCCCEECHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCCEEC
T ss_conf             653---30100378741204568999999999987598244033324679999999863897000


No 53 
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=97.40  E-value=0.0002  Score=45.76  Aligned_cols=85  Identities=27%  Similarity=0.443  Sum_probs=58.9

Q ss_pred             CCEEEEEEECCEEEEEEEEEEEEE-------CCCC-----EEEEEE---EEE-CCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf             607899998898999999877611-------8822-----389976---788-511138995899999999999613884
Q gi|254781162|r   72 LSLSFLCAEGKRIVGSVRMTPISI-------EKIT-----GHLLGP---IVV-HPLYQNKGIGRKLISMSVDAAEKKGSQ  135 (192)
Q Consensus        72 ~~lslVA~~~~~IVG~i~~~pv~~-------~~~~-----~~~Lgp---laV-~P~~rg~GiG~~Li~~~l~~a~~~g~~  135 (192)
                      ..+|+.-.+++-+||.+++-....       .+..     ....|+   +.= .-.||.+|+|+.||+.|...|++.+..
T Consensus       406 ~Fls~ed~~~d~lig~lrlR~p~e~~~r~e~~~~~aivrelhvyg~~vpig~~~~~~QH~G~G~~L~~~AE~ia~ee~~~  485 (515)
T COG1243         406 IFLSYEDPKNDILIGFLRLREPSEGAHREEIDDKTAIVRELHVYGSEVPIGKREDEWQHRGYGRELLEEAERIAREEGAK  485 (515)
T ss_pred             EEEECCCCHHHHHHHEEEECCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCC
T ss_conf             87652462231133123532445300101026631355432020210256667430100547899999999998761356


Q ss_pred             EEEEE---ECHHHHHHCCCEECCC
Q ss_conf             79984---0865787429487463
Q gi|254781162|r  136 VIVLV---GDIAYYSKLGFQAVPW  156 (192)
Q Consensus       136 ~v~l~---g~~~yY~rfGF~~~~~  156 (192)
                      .+.++   |.-+||.|+||+....
T Consensus       486 ki~viSgiG~ReYy~k~GY~~~gp  509 (515)
T COG1243         486 KILVISGIGVREYYRKLGYELDGP  509 (515)
T ss_pred             CEEEEECCCHHHHHHHHCCCCCCC
T ss_conf             179983332899999738633477


No 54 
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=97.37  E-value=0.0026  Score=39.31  Aligned_cols=76  Identities=16%  Similarity=0.336  Sum_probs=60.7

Q ss_pred             CCEEEEEE-ECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHH---HHH
Q ss_conf             60789999-88989999998776118822389976788511138995899999999999613884799840865---787
Q gi|254781162|r   72 LSLSFLCA-EGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGDIA---YYS  147 (192)
Q Consensus        72 ~~lslVA~-~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~~~---yY~  147 (192)
                      .+...++. ++++||++-        +..+-.|-.+||+|.+||.|+.-+|+.+.++.+-++|..-++++..|.   +++
T Consensus        35 ve~~v~~~~~~~~iiacG--------siaGnvikcvAvs~s~qGeGl~lkl~TeLin~ay~~g~~hLFiyTKp~~~~lFk  106 (352)
T COG3053          35 VEYFVAIYRDNEEIIACG--------SIAGNVIKCVAVSESLQGEGLALKLVTELINLAYERGRTHLFIYTKPEYAALFK  106 (352)
T ss_pred             CEEEEEEECCCCCEEEEC--------CCCCCEEEEEEECHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHH
T ss_conf             208999981788689953--------401356689996420156308999999999999974982699994666799887


Q ss_pred             HCCCEECC
Q ss_conf             42948746
Q gi|254781162|r  148 KLGFQAVP  155 (192)
Q Consensus       148 rfGF~~~~  155 (192)
                      ..||..+.
T Consensus       107 ~~GF~~i~  114 (352)
T COG3053         107 QCGFSEIA  114 (352)
T ss_pred             HCCCEEEE
T ss_conf             38966864


No 55 
>pfam04958 AstA Arginine N-succinyltransferase beta subunit. Arginine N-succinyltransferase EC:2.3.1.109 catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism by the arginine succinyltransferase pathway.
Probab=96.96  E-value=0.0061  Score=37.10  Aligned_cols=118  Identities=18%  Similarity=0.213  Sum_probs=70.9

Q ss_pred             EEEEECCHHHHHHHHHHHC--CCCCC---------------CCEEEEEECC-CCCCCCEEEEEEE--CCEEEEEEEEEEE
Q ss_conf             3442079899999999853--89872---------------1001311038-8887607899998--8989999998776
Q gi|254781162|r   34 FLERLEHDSSICAMHADSF--GPGRF---------------VRAAVLLREQ-GMHDLSLSFLCAE--GKRIVGSVRMTPI   93 (192)
Q Consensus        34 ~~~R~e~~~di~ai~~~~f--gpgr~---------------~~~~~~lR~~-~~~~~~lslVA~~--~~~IVG~i~~~pv   93 (192)
                      |.+|+-+.+|+.+|..++-  |+|-.               ++.++.-... ...+..+-||.|+  .|+|||+......
T Consensus         1 lviRpv~~~Dl~~L~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~Sf~~~~~~~~~~~~YlFVLEd~~tg~vvGts~I~a~   80 (338)
T pfam04958         1 LVIRPARASDLPALYRLAKESGHGFTSLPADRELLRAKIARSEASFAGEEVDQPGDEGYLFVLEDTETGEVVGTSGIEAA   80 (338)
T ss_pred             CEEEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEC
T ss_conf             95721751039999999998099865599999999999999999864677799775217999971578848888766643


Q ss_pred             ----------EEC----------------------C-CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHH---HHCCCCEE
Q ss_conf             ----------118----------------------8-22389976788511138995899999999999---61388479
Q gi|254781162|r   94 ----------SIE----------------------K-ITGHLLGPIVVHPLYQNKGIGRKLISMSVDAA---EKKGSQVI  137 (192)
Q Consensus        94 ----------~~~----------------------~-~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a---~~~g~~~v  137 (192)
                                ++.                      . ...-.|+.+.++|+||+.|.|+.|-+.-.-.+   +++=...+
T Consensus        81 vG~~~Pfy~yr~~~~~h~S~~L~v~~~~~~L~l~~d~tg~sEl~tLfl~p~~R~~~~G~lLS~~RfLfma~~~~rF~~~v  160 (338)
T pfam04958        81 VGLDEPFYSYRLSTLVHASRELGVHNRVEVLTLCNDLTGCSELCTLFLDPEYRKGGNGRLLSRSRFLFIAAHRERFAERV  160 (338)
T ss_pred             CCCCCCCEEEEECCEEECCCCCCCCCCEEEEEEECCCCCCEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             46787867899322332161248520101588750677870368887488881776315789999999876266643556


Q ss_pred             EE--------EECHHHHHHCCC
Q ss_conf             98--------408657874294
Q gi|254781162|r  138 VL--------VGDIAYYSKLGF  151 (192)
Q Consensus       138 ~l--------~g~~~yY~rfGF  151 (192)
                      +.        -|..+||..+|=
T Consensus       161 iAEmRG~~De~G~SPFW~~lg~  182 (338)
T pfam04958       161 IAEMRGVSDEDGRSPFWDALGR  182 (338)
T ss_pred             HHHHCCCCCCCCCCCHHHHHHH
T ss_conf             6451586188999823787632


No 56 
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=96.94  E-value=0.011  Score=35.70  Aligned_cols=117  Identities=12%  Similarity=0.149  Sum_probs=71.1

Q ss_pred             EEEECCHHHHHHHHHHHC--CCCCCC---------------CEEEEEECCCCCCCCEEEEEEE--CCEEEEEEEEEEE--
Q ss_conf             442079899999999853--898721---------------0013110388887607899998--8989999998776--
Q gi|254781162|r   35 LERLEHDSSICAMHADSF--GPGRFV---------------RAAVLLREQGMHDLSLSFLCAE--GKRIVGSVRMTPI--   93 (192)
Q Consensus        35 ~~R~e~~~di~ai~~~~f--gpgr~~---------------~~~~~lR~~~~~~~~lslVA~~--~~~IVG~i~~~pv--   93 (192)
                      .+|+-+.+|..+|..++-  |+|-.+               +.++.-....+....+-||.|+  .|+|||+......  
T Consensus         1 vvRpv~~~Dl~~l~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sf~~~~~~~~~e~YlFVLEd~~tg~vvG~s~I~a~vG   80 (336)
T TIGR03245         1 IVRPSRFADLPAIERLANESAIGVTSLPADRAKLGEKIAQSERSFAAEVSFVGEERYLFVLEDTETGKLLGTSSIVASAG   80 (336)
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEC
T ss_conf             94447411199999999973999655999999999999999998635567888740899998568891899874786104


Q ss_pred             --------EEC----------------------C-CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHH---HHCCCCEEEE
Q ss_conf             --------118----------------------8-22389976788511138995899999999999---6138847998
Q gi|254781162|r   94 --------SIE----------------------K-ITGHLLGPIVVHPLYQNKGIGRKLISMSVDAA---EKKGSQVIVL  139 (192)
Q Consensus        94 --------~~~----------------------~-~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a---~~~g~~~v~l  139 (192)
                              ++.                      . ...-.|+.+.++|+||+.|.|+.|-+.-.-.+   +++=...++.
T Consensus        81 ~~~Pfy~yr~~~~vh~S~~L~~~~~~~~L~l~~d~tG~sEl~tLfL~p~~R~~~~G~LLS~~RfLFmA~~~~rF~~~viA  160 (336)
T TIGR03245        81 YGEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAELLSRARLLFMAAHRERFQSRIIV  160 (336)
T ss_pred             CCCCCEEEEECCEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHEE
T ss_conf             89872899926467525035974230059986168887057999978787478605689999999998717661203103


Q ss_pred             --------EECHHHHHHCCC
Q ss_conf             --------408657874294
Q gi|254781162|r  140 --------VGDIAYYSKLGF  151 (192)
Q Consensus       140 --------~g~~~yY~rfGF  151 (192)
                              -|..+||..+|=
T Consensus       161 EmRG~~d~~G~SPFW~~lg~  180 (336)
T TIGR03245       161 EIQGVQDDNGDSPFWDAIGR  180 (336)
T ss_pred             HHCCCCCCCCCCCCHHHHHC
T ss_conf             00585489999830787635


No 57 
>PRK13688 hypothetical protein; Provisional
Probab=96.92  E-value=0.00076  Score=42.39  Aligned_cols=77  Identities=23%  Similarity=0.233  Sum_probs=54.2

Q ss_pred             EEEEECCEEEEEEEEEEEEE-------CCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCC--EEEEEECHHHH
Q ss_conf             99998898999999877611-------8822389976788511138995899999999999613884--79984086578
Q gi|254781162|r   76 FLCAEGKRIVGSVRMTPISI-------EKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQ--VIVLVGDIAYY  146 (192)
Q Consensus        76 lVA~~~~~IVG~i~~~pv~~-------~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~--~v~l~g~~~yY  146 (192)
                      +-..-|+++|+-..+.....       ...+-+.|..|-|+|.||++|+|++|+.    .|+..+.+  .+.-....+|+
T Consensus        48 YGIy~G~kLvARMsLy~~~~~~~~yF~~~~dYleLWKLEVLp~yQ~~GyG~~LVd----fAKsf~lPIKt~aR~~S~~Fw  123 (157)
T PRK13688         48 YGIYYGDSLVARMSLYKKGDVEEPYFPIFGDYLELWKLEVLPKYQNRGYGEMLVD----FAKSFNMPIKTIARNDSKDFW  123 (157)
T ss_pred             EEEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHH----HHHHCCCCEEECCCCCHHHHH
T ss_conf             2588764088888888607865456798415767644210622023665799999----998769970410121407799


Q ss_pred             HHCCCEECCC
Q ss_conf             7429487463
Q gi|254781162|r  147 SKLGFQAVPW  156 (192)
Q Consensus       147 ~rfGF~~~~~  156 (192)
                      .+.||+.+..
T Consensus       124 ~k~gF~~v~~  133 (157)
T PRK13688        124 DKLGFTPVEA  133 (157)
T ss_pred             HHCCCEECCC
T ss_conf             9749954223


No 58 
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=96.91  E-value=0.0006  Score=43.00  Aligned_cols=44  Identities=34%  Similarity=0.570  Sum_probs=35.9

Q ss_pred             EEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHCCC
Q ss_conf             7885111389958999999999996138847998408657874294
Q gi|254781162|r  106 IVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGDIAYYSKLGF  151 (192)
Q Consensus       106 laV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~~~yY~rfGF  151 (192)
                      ++|+|++||+|+|++|++++++.++..|..  .......+|.++||
T Consensus        87 l~v~~~~rg~Gig~~Ll~~~~~~~~~~~~~--~~~~~~~~~~~~~~  130 (156)
T COG0454          87 LYVLPEYRGKGIGSALLEAALEWARKRGIS--LNRLALEVYEKNGF  130 (156)
T ss_pred             EEECHHHHCCCCHHHHHHHHHHHHHHCCCC--HHHHHHHHHHHHCC
T ss_conf             788698855892899999999999980950--67888989987510


No 59 
>PRK00756 acyltransferase NodA; Provisional
Probab=96.87  E-value=0.0066  Score=36.92  Aligned_cols=112  Identities=15%  Similarity=0.189  Sum_probs=78.8

Q ss_pred             ECCHHHHHHHHHHHCCC-CCC-CCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEE--EEECCCCE--EEEEEEEECCC
Q ss_conf             07989999999985389-872-10013110388887607899998898999999877--61188223--89976788511
Q gi|254781162|r   38 LEHDSSICAMHADSFGP-GRF-VRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTP--ISIEKITG--HLLGPIVVHPL  111 (192)
Q Consensus        38 ~e~~~di~ai~~~~fgp-gr~-~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~p--v~~~~~~~--~~LgplaV~P~  111 (192)
                      .++..+....+..+||| |-| ++.-+--|.=...-+++-.++++..-|..|+-+.+  ++++..+.  ..||-.+|.|+
T Consensus        17 l~dH~eLaeFfrktYgptGafnakpFeG~RSWAGARPE~R~IgyD~~GVaAH~G~LRRFIkVg~vdlLVaElGLygVRpD   96 (196)
T PRK00756         17 LSDHAELAEFFRKTYGPTGAFNAKPFEGGRSWAGARPELRAIAYDSHGVAAHMGLLRRFIKVGEVDLLVAELGLYGVRPD   96 (196)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHEEECCEEEEEEEEEEEEECCC
T ss_conf             01279999999983288764246456777565667873378865673088887777530255664057773024787577


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCEEEEEECH---HHHHHCC
Q ss_conf             13899589999999999961388479984086---5787429
Q gi|254781162|r  112 YQNKGIGRKLISMSVDAAEKKGSQVIVLVGDI---AYYSKLG  150 (192)
Q Consensus       112 ~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~~---~yY~rfG  150 (192)
                      ..|.||+.. |+...-.+++.|..+-+-.-.+   +.++||+
T Consensus        97 lEGlGi~~s-~~~m~PvLq~LgVPF~FGtVR~al~~Hv~R~~  137 (196)
T PRK00756         97 LEGLGIAHS-IRAMYPVLQELGVPFAFGTVRHALRNHVERLC  137 (196)
T ss_pred             CCCCCHHHH-HHHHHHHHHHCCCCEECCCCHHHHHHHHHHHH
T ss_conf             443551355-88887888863997342342598999999997


No 60 
>PRK10456 arginine succinyltransferase; Provisional
Probab=96.65  E-value=0.012  Score=35.43  Aligned_cols=117  Identities=15%  Similarity=0.138  Sum_probs=70.2

Q ss_pred             EEEEECCHHHHHHHHHHHCC--CCCCC---------------CEEEEEECCCCCCCCEEEEEEE--CCEEEEEEEEEEE-
Q ss_conf             34420798999999998538--98721---------------0013110388887607899998--8989999998776-
Q gi|254781162|r   34 FLERLEHDSSICAMHADSFG--PGRFV---------------RAAVLLREQGMHDLSLSFLCAE--GKRIVGSVRMTPI-   93 (192)
Q Consensus        34 ~~~R~e~~~di~ai~~~~fg--pgr~~---------------~~~~~lR~~~~~~~~lslVA~~--~~~IVG~i~~~pv-   93 (192)
                      |.+|+-+.+|..+|..++-.  +|-.+               +.++. .+-...+..+-||.|+  .|+|||+...... 
T Consensus         2 livRpv~~~Dl~~l~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sf~-~~~~~~~~~YlFVLED~~tg~vvGts~I~a~v   80 (344)
T PRK10456          2 MVIRPVERSDLAALMQLAGKTGGGLTSLPANEATLAARIERALKTWQ-GELPKSEQGYVFVLEDSETGTVAGICAIEVAV   80 (344)
T ss_pred             EEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCEEEEEEEECCCCEEEEEEEEEECC
T ss_conf             48973760049999999997099976599999999999999999864-78997643179999855788088887578503


Q ss_pred             ---------EEC----------------------C-CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHH---HHCCCCEEE
Q ss_conf             ---------118----------------------8-22389976788511138995899999999999---613884799
Q gi|254781162|r   94 ---------SIE----------------------K-ITGHLLGPIVVHPLYQNKGIGRKLISMSVDAA---EKKGSQVIV  138 (192)
Q Consensus        94 ---------~~~----------------------~-~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a---~~~g~~~v~  138 (192)
                               ++.                      . ...-.|+.+.++|+||+.|.|+.|-+.-.-.+   +++-...++
T Consensus        81 G~~~Pfy~yr~~~~~h~S~~L~~~~~~~~L~l~~d~tG~sEl~tLfL~p~~R~~~~G~lLS~~RfLFia~~~~rF~~~vi  160 (344)
T PRK10456         81 GLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKFNDKVV  160 (344)
T ss_pred             CCCCCCEEEEECCEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEEECHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             57878478882224530523485201015887616778703688875788816764047889899999871766534455


Q ss_pred             E--------EECHHHHHHCCC
Q ss_conf             8--------408657874294
Q gi|254781162|r  139 L--------VGDIAYYSKLGF  151 (192)
Q Consensus       139 l--------~g~~~yY~rfGF  151 (192)
                      .        -|..+||..+|=
T Consensus       161 AEmRG~~D~~G~SPFW~~lg~  181 (344)
T PRK10456        161 AEMRGVIDEHGYSPFWQSLGK  181 (344)
T ss_pred             HHHCCCCCCCCCCCHHHHHHC
T ss_conf             441586189999822787632


No 61 
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=96.52  E-value=0.032  Score=32.88  Aligned_cols=109  Identities=14%  Similarity=0.143  Sum_probs=70.3

Q ss_pred             CCEEEEEE-ECCEEEEEEEEEEEEEC------------------CCCEEEEEEEEECCCCCC---CC----HHHHHHHHH
Q ss_conf             60789999-88989999998776118------------------822389976788511138---99----589999999
Q gi|254781162|r   72 LSLSFLCA-EGKRIVGSVRMTPISIE------------------KITGHLLGPIVVHPLYQN---KG----IGRKLISMS  125 (192)
Q Consensus        72 ~~lslVA~-~~~~IVG~i~~~pv~~~------------------~~~~~~LgplaV~P~~rg---~G----iG~~Li~~~  125 (192)
                      ...-+++. ++|+|+|++++.|..-.                  +.....+...+|++....   .+    +...|+..+
T Consensus        52 ~~~Yll~~~~~g~v~G~~RLlpTt~p~ML~~~Fp~ll~~~~~p~~~~i~E~SRF~Vd~~~~~~~~~~~~~~~t~~L~~a~  131 (207)
T PRK13834         52 KPTYILAISDSGRVAGCARLLPALGPTMLADVFPQLLPDGRLNAHPAMIESSRFCVDTTLAEGRGGGSLHEATLTMFAGI  131 (207)
T ss_pred             CCEEEEEECCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             98699999089848989963378997633470577638999999999899783489776665556887277899999999


Q ss_pred             HHHHHHCCCCEEEEEECHH---HHHHCCCEECCCCCEECCCCCCHHHEEEEEC--CCCCCCCC
Q ss_conf             9999613884799840865---7874294874636536689999566698435--77810178
Q gi|254781162|r  126 VDAAEKKGSQVIVLVGDIA---YYSKLGFQAVPWKSLILPAPVDPNRVLFLPL--VQNVAQNI  183 (192)
Q Consensus       126 l~~a~~~g~~~v~l~g~~~---yY~rfGF~~~~~~~l~~p~pv~~~~~l~l~L--~~~~l~~~  183 (192)
                      ++.+...|+..++.+.++.   .+.|.||...+   +-.|-++.....++..+  .+..++.+
T Consensus       132 ve~a~~~Gi~~ivtV~~~~~eRiL~R~G~~~~r---LG~p~~ig~~~~vA~~l~vd~~tl~~l  191 (207)
T PRK13834        132 IEWSMANGYTEIVTATDLRFERILARAGWPMQR---LGEPKAIGNTMAVAGTLPADADSFERV  191 (207)
T ss_pred             HHHHHHCCCCEEEEEECHHHHHHHHHCCCCEEE---CCCCEEECCEEEEEEEEECCHHHHHHH
T ss_conf             999998799889999438999999985995596---768877788799999987699999872


No 62 
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=96.48  E-value=0.021  Score=33.99  Aligned_cols=116  Identities=17%  Similarity=0.186  Sum_probs=70.1

Q ss_pred             EEEECCHHHHHHHHHHHC--CCCCC---------------CCEEEEEECCCCCCCCEEEEEEE--CCEEEEEEEEEEE--
Q ss_conf             442079899999999853--89872---------------10013110388887607899998--8989999998776--
Q gi|254781162|r   35 LERLEHDSSICAMHADSF--GPGRF---------------VRAAVLLREQGMHDLSLSFLCAE--GKRIVGSVRMTPI--   93 (192)
Q Consensus        35 ~~R~e~~~di~ai~~~~f--gpgr~---------------~~~~~~lR~~~~~~~~lslVA~~--~~~IVG~i~~~pv--   93 (192)
                      .+|+-+.+|..+|..++-  |+|-.               ++.++.- +..+....+-||.|+  .|+|||+......  
T Consensus         1 vvRpv~~~Dl~~l~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sf~~-~~~~~~~~YlFVLEd~~~g~vvGts~I~a~vG   79 (336)
T TIGR03244         1 IVRPVETSDLDALYQLAQSTGIGLTSLPANEDLLSARIERAEKTFSG-ELTRAEQGYLFVLEDTETGTVAGVSAIEAAVG   79 (336)
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CCCCCCCEEEEEEEECCCCEEEEEEEEEECCC
T ss_conf             94437422099999999973998655999999999999999998658-78877631899998778993999874675225


Q ss_pred             --------EEC----------------------C-CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHH---HHCCCCEEEE
Q ss_conf             --------118----------------------8-22389976788511138995899999999999---6138847998
Q gi|254781162|r   94 --------SIE----------------------K-ITGHLLGPIVVHPLYQNKGIGRKLISMSVDAA---EKKGSQVIVL  139 (192)
Q Consensus        94 --------~~~----------------------~-~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a---~~~g~~~v~l  139 (192)
                              ++.                      . ...-.|+.+.++|+||+.|.|+.|-+.-.-.+   +++=...++.
T Consensus        80 ~~~Pfy~yr~~~~~~~S~~L~~~~~~~~L~l~~d~tg~sEl~tLfl~p~~R~~~~G~lLS~~RfLFia~~~erF~~~viA  159 (336)
T TIGR03244        80 LEEPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGGNGRLLSKSRFLFIAQFRERFSKKIIA  159 (336)
T ss_pred             CCCCCEEEEECCEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf             89887889967556624457975311159987377687268999978898278723589999999998717651214220


Q ss_pred             --------EECHHHHHHCCC
Q ss_conf             --------408657874294
Q gi|254781162|r  140 --------VGDIAYYSKLGF  151 (192)
Q Consensus       140 --------~g~~~yY~rfGF  151 (192)
                              -|..+||..+|=
T Consensus       160 EmRG~~d~~G~SPFW~~lg~  179 (336)
T TIGR03244       160 EMRGVSDEQGRSPFWNALGR  179 (336)
T ss_pred             HHCCCCCCCCCCCCHHHHHC
T ss_conf             20585489999831777624


No 63 
>pfam02474 NodA Nodulation protein A (NodA). Rhizobia nodulation (nod) genes control the biosynthesis of Nod factors required for infection and nodulation of their legume hosts. Nodulation protein A (NodA) is a N-acetyltransferase involved in production of Nod factors that stimulate mitosis in various plant protoplasts.
Probab=96.43  E-value=0.011  Score=35.54  Aligned_cols=113  Identities=14%  Similarity=0.175  Sum_probs=78.9

Q ss_pred             ECCHHHHHHHHHHHCCC-CCC-CCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEE--EEECCCCE--EEEEEEEECCC
Q ss_conf             07989999999985389-872-10013110388887607899998898999999877--61188223--89976788511
Q gi|254781162|r   38 LEHDSSICAMHADSFGP-GRF-VRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTP--ISIEKITG--HLLGPIVVHPL  111 (192)
Q Consensus        38 ~e~~~di~ai~~~~fgp-gr~-~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~p--v~~~~~~~--~~LgplaV~P~  111 (192)
                      ..+..++...+..+||| |.| ++.-+=-|.=...-+++-.++++..-|..|+-+.+  +++++.+.  ..||-.+|.|+
T Consensus        17 l~dH~eLaeFfrktYgptgafnakpFeG~RSWAGARPElR~IgyD~~GVaAH~G~LRRFIkVg~vDlLVaELGLygVRpD   96 (196)
T pfam02474        17 LADHIELSEFFRKTYGPTGAFNAKPFEGGRSWAGARPELRAIAYDSRGVAAHMGLLRRFIKVGEVDLLVAELGLYGVRPD   96 (196)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHEECCEEEEEEEEEEEEECCC
T ss_conf             11169999999984288764346656777564557851378876573088988888775124761013443001476565


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCEEEEEECH---HHHHHCCC
Q ss_conf             13899589999999999961388479984086---57874294
Q gi|254781162|r  112 YQNKGIGRKLISMSVDAAEKKGSQVIVLVGDI---AYYSKLGF  151 (192)
Q Consensus       112 ~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~~---~yY~rfGF  151 (192)
                      .+|.||+.. |+...-.+++.|.++-+-.-.+   +.++|||-
T Consensus        97 lEGlGi~~s-~~~m~PvLq~LgVPF~FGtVR~al~~Hv~R~~r  138 (196)
T pfam02474        97 LEGLGISHS-MRVMYPVLQELGVPFAFGTVRHALRKHVERLCR  138 (196)
T ss_pred             CCCCCHHHH-HHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHC
T ss_conf             133534677-989988888629974523525989999999821


No 64 
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=96.25  E-value=0.029  Score=33.17  Aligned_cols=150  Identities=19%  Similarity=0.271  Sum_probs=82.6

Q ss_pred             EEEECCHHHHHHHHHHHC--CCCCC---------------CCEEEEEECCCCCCCCEEEEEEE--CCEEEEEEEEEEE--
Q ss_conf             442079899999999853--89872---------------10013110388887607899998--8989999998776--
Q gi|254781162|r   35 LERLEHDSSICAMHADSF--GPGRF---------------VRAAVLLREQGMHDLSLSFLCAE--GKRIVGSVRMTPI--   93 (192)
Q Consensus        35 ~~R~e~~~di~ai~~~~f--gpgr~---------------~~~~~~lR~~~~~~~~lslVA~~--~~~IVG~i~~~pv--   93 (192)
                      .+|+-+.+|..+|..++-  |+|-.               ++.++.- +..+.+..+-||.|+  .|+|||+......  
T Consensus         1 viRpv~~~Dl~~l~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sf~~-~~~~~~~~YlFVLED~~tg~vvG~s~I~a~vG   79 (335)
T TIGR03243         1 IVRPVRTSDLDALMQLARESGIGLTSLPADRAALGSRIARSEKSFAG-ESTRGEEGYLFVLEDTETGTVAGVSAIEAAVG   79 (335)
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CCCCCCCEEEEEEEECCCCCEEEEEEEEECCC
T ss_conf             94437323099999999973998655999999999999999998648-77888734899998778991899874676145


Q ss_pred             --------EEC----------------------C-CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHH---HHCCCCEEEE
Q ss_conf             --------118----------------------8-22389976788511138995899999999999---6138847998
Q gi|254781162|r   94 --------SIE----------------------K-ITGHLLGPIVVHPLYQNKGIGRKLISMSVDAA---EKKGSQVIVL  139 (192)
Q Consensus        94 --------~~~----------------------~-~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a---~~~g~~~v~l  139 (192)
                              ++.                      . ...-.|+.+.++|+||+.|.|+.|-+.-.-.+   +++=...++.
T Consensus        80 ~~~Pfy~yr~~~~~h~S~~L~~~~~~~~L~l~~d~tg~sEl~tLfl~p~~R~~~~G~lLS~~RflFma~~~~rF~~~viA  159 (335)
T TIGR03243        80 LDEPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKGGNGRLLSRSRFLFIAAFRERFGDKIIA  159 (335)
T ss_pred             CCCCCEEEEECCEEEECCCCCCCCCCCEEEEECCCCCCEEEEEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             88874799917556506346872121169976278787057999987787378724589999999998737664367885


Q ss_pred             --------EECHHHHHHCCCE-------ECCC------CCEECCCCCCHHHEEEEECCCCCCCCCEEEE
Q ss_conf             --------4086578742948-------7463------6536689999566698435778101781677
Q gi|254781162|r  140 --------VGDIAYYSKLGFQ-------AVPW------KSLILPAPVDPNRVLFLPLVQNVAQNIKGIV  187 (192)
Q Consensus       140 --------~g~~~yY~rfGF~-------~~~~------~~l~~p~pv~~~~~l~l~L~~~~l~~~~G~v  187 (192)
                              -|..+||..+|=.       .+-.      ..+...  .=|.+-...+|-+...+.+-|.|
T Consensus       160 EmRG~~d~~G~SPFW~~lg~~Ff~mdF~~AD~ls~~~~k~FIae--LmP~~PIYv~lLp~~Aq~vIG~v  226 (335)
T TIGR03243       160 EMRGVSDEQGRSPFWEALGRHFFSMDFAQADYLSGIGSKTFIAE--LMPKYPIYVPLLPEEAQDVIGQV  226 (335)
T ss_pred             HCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCHHHHH--HCCCCCEEEECCCHHHHHHHCCC
T ss_conf             41787389999830787634235998778778872687244887--68899754205998999972984


No 65 
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=95.97  E-value=0.0053  Score=37.49  Aligned_cols=84  Identities=19%  Similarity=0.218  Sum_probs=61.7

Q ss_pred             EEEEECCEEEEEEEEEEEEE--CC----------CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE--EE
Q ss_conf             99998898999999877611--88----------223899767885111389958999999999996138847998--40
Q gi|254781162|r   76 FLCAEGKRIVGSVRMTPISI--EK----------ITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVL--VG  141 (192)
Q Consensus        76 lVA~~~~~IVG~i~~~pv~~--~~----------~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l--~g  141 (192)
                      |||+.+|.+-|.++-.-...  ++          .+...+-.+.|....||+|+|++|-+...+.|+..|+..+.-  ..
T Consensus        48 F~ArR~G~l~afl~tFd~~a~ydSpNFlWFrErYe~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~agy~~~tCEVn~  127 (167)
T COG3818          48 FVARRDGNLAAFLVTFDSSARYDSPNFLWFRERYENFFYVDRVVVASRARGRGVARALYADLFSYAELAGYPYLTCEVNL  127 (167)
T ss_pred             HHHHHCCCHHHHEEECCCCCCCCCCCEEEHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf             88863244444035336655679986023565377427998999974134664389999999999986588569998607


Q ss_pred             CH------HHHHHCCCEECCCCCE
Q ss_conf             86------5787429487463653
Q gi|254781162|r  142 DI------AYYSKLGFQAVPWKSL  159 (192)
Q Consensus       142 ~~------~yY~rfGF~~~~~~~l  159 (192)
                      ||      .|-..+||.++.+..+
T Consensus       128 DppnpasdaFHaalGF~eVG~a~i  151 (167)
T COG3818         128 DPPNPASDAFHAALGFHEVGQATI  151 (167)
T ss_pred             CCCCHHHHHHHHHCCCEECCCEEE
T ss_conf             999827788766508647562478


No 66 
>KOG2535 consensus
Probab=95.76  E-value=0.015  Score=34.88  Aligned_cols=77  Identities=29%  Similarity=0.473  Sum_probs=50.2

Q ss_pred             ECCEEEEEEEEEEEEECC--------C----CEEEEEE-EEEC----CCCCCCCHHHHHHHHHHHHHH-HCCCCEEEE--
Q ss_conf             889899999987761188--------2----2389976-7885----111389958999999999996-138847998--
Q gi|254781162|r   80 EGKRIVGSVRMTPISIEK--------I----TGHLLGP-IVVH----PLYQNKGIGRKLISMSVDAAE-KKGSQVIVL--  139 (192)
Q Consensus        80 ~~~~IVG~i~~~pv~~~~--------~----~~~~Lgp-laV~----P~~rg~GiG~~Li~~~l~~a~-~~g~~~v~l--  139 (192)
                      ..+-+||-.++.++....        .    +.+..|+ +.|+    ..+|.||.|+.||+++...|+ +.|...+.+  
T Consensus       450 kqDILiGLLRLRkcs~~~~~~el~g~~SivRELHVYGs~vpv~~rDp~KfQHQG~GtLLmeEAERIAr~EHgS~KiavIS  529 (554)
T KOG2535         450 KQDILIGLLRLRKCSKKTTRPELFGSQSIVRELHVYGSVVPVHSRDPTKFQHQGFGTLLMEEAERIAREEHGSGKIAVIS  529 (554)
T ss_pred             CHHHHHHHHHHHHCCCCCCCHHHCCCHHHHEEEEECCEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             32378888988642654346001475001101112102532246883343213434789999999988750786368994


Q ss_pred             -EECHHHHHHCCCEECCC
Q ss_conf             -40865787429487463
Q gi|254781162|r  140 -VGDIAYYSKLGFQAVPW  156 (192)
Q Consensus       140 -~g~~~yY~rfGF~~~~~  156 (192)
                       +|.-+||.|+||+-...
T Consensus       530 GVGtR~YY~klGY~LdGP  547 (554)
T KOG2535         530 GVGTRNYYRKLGYELDGP  547 (554)
T ss_pred             CCCHHHHHHHHCCEECCC
T ss_conf             353488898718042370


No 67 
>PHA01807 hypothetical protein
Probab=95.51  E-value=0.086  Score=30.39  Aligned_cols=69  Identities=14%  Similarity=0.125  Sum_probs=51.6

Q ss_pred             CCCEEEEEEECCEEEEEEEEEEEEECCC--CEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             7607899998898999999877611882--238997678851113899589999999999961388479984
Q gi|254781162|r   71 DLSLSFLCAEGKRIVGSVRMTPISIEKI--TGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLV  140 (192)
Q Consensus        71 ~~~lslVA~~~~~IVG~i~~~pv~~~~~--~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~  140 (192)
                      ...+-+.+..||+++|.....- ..+..  +.+...--+|.|+|+..|+..++++.++..|...+++.+.-.
T Consensus        48 ~dr~e~Lv~rdG~laG~Av~~~-dDD~HVG~cl~vQWqyVlPe~rnaGv~~~f~R~l~~lA~~~n~p~va~t  118 (145)
T PHA01807         48 NDRTELLVFRDGQLAGGAVIVF-DDDPHVGPCLTVQWQYVLPEYRNAGVAREFIRELHRLAGWGNIPLVAWT  118 (145)
T ss_pred             CCCEEEEEEECCEEEEEEEEEE-CCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEE
T ss_conf             7725899997788632389984-5998743315788888523445664249999999997503687258987


No 68 
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=95.35  E-value=0.089  Score=30.29  Aligned_cols=104  Identities=15%  Similarity=0.025  Sum_probs=68.1

Q ss_pred             EEECCHHHHHHHHHHHCCC-C-CCC----CEEEEEECCCCCCCCEEEEEEECC-EEEEEEEEEEEEECCCCEEEEEEEEE
Q ss_conf             4207989999999985389-8-721----001311038888760789999889-89999998776118822389976788
Q gi|254781162|r   36 ERLEHDSSICAMHADSFGP-G-RFV----RAAVLLREQGMHDLSLSFLCAEGK-RIVGSVRMTPISIEKITGHLLGPIVV  108 (192)
Q Consensus        36 ~R~e~~~di~ai~~~~fgp-g-r~~----~~~~~lR~~~~~~~~lslVA~~~~-~IVG~i~~~pv~~~~~~~~~LgplaV  108 (192)
                      -|..++.++.+.+++.+.. | +..    +..++   .-...-.|-+-|..++ ++||..--+|..-++.-.+---.++|
T Consensus         6 rrl~dp~el~~~~dV~~~aWg~~d~~~~~~d~i~---al~~~GGlvlgAf~~dg~lVGls~G~pg~r~g~~y~ySH~~gV   82 (266)
T COG3375           6 RRLTDPAELDEAEDVQASAWGSEDRDGAPADTIR---ALRYHGGLVLGAFSADGRLVGLSYGYPGGRGGSLYLYSHMLGV   82 (266)
T ss_pred             EECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH---HHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEHHC
T ss_conf             7537989988888899987176533544388999---9986188699987389837878852577678755655300214


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             5111389958999999999996138847998408
Q gi|254781162|r  109 HPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGD  142 (192)
Q Consensus       109 ~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~  142 (192)
                      .|+++++|+|-+|-..--+.+.++|+..+--.=|
T Consensus        83 ~e~~k~sglg~aLK~~Qre~a~~~G~tli~WTfD  116 (266)
T COG3375          83 REEVKGSGLGVALKMKQRERALSMGYTLIAWTFD  116 (266)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECC
T ss_conf             5010346655655777788998658036787606


No 69 
>pfam08444 Gly_acyl_tr_C Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region. This family features the C-terminal region of several mammalian specific aralkyl acyl-CoA:amino acid N-acyltransferase (glycine N-acyltransferase) proteins EC:2.3.1.13.
Probab=95.28  E-value=0.042  Score=32.21  Aligned_cols=54  Identities=24%  Similarity=0.275  Sum_probs=45.4

Q ss_pred             EEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC-----HHHHHHCCCEECCC
Q ss_conf             9767885111389958999999999996138847998408-----65787429487463
Q gi|254781162|r  103 LGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGD-----IAYYSKLGFQAVPW  156 (192)
Q Consensus       103 LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~-----~~yY~rfGF~~~~~  156 (192)
                      ++--+..|+||++|+.+.++...+..+.++|++.-.-+-+     ...-.++||...|-
T Consensus        22 ~rmgyTlPeyR~kG~~~~~~~~~~~~L~~~g~P~Y~hv~~~N~~~~k~~~~lg~~~~pc   80 (89)
T pfam08444        22 LRMAGTLPKYRRQGLMSHVIYHQAQYLEKLGFPVYSHVDKANEISQKMSGNLGHVPMPC   80 (89)
T ss_pred             EEECCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEHHCCHHHHHHHHHCCCEECCC
T ss_conf             10013377787558699999999999986799946864115788999999779825798


No 70 
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=95.20  E-value=0.015  Score=34.87  Aligned_cols=55  Identities=18%  Similarity=0.364  Sum_probs=43.3

Q ss_pred             EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE-------E----ECHHHHHHCCCEECC
Q ss_conf             899767885111389958999999999996138847998-------4----086578742948746
Q gi|254781162|r  101 HLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVL-------V----GDIAYYSKLGFQAVP  155 (192)
Q Consensus       101 ~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l-------~----g~~~yY~rfGF~~~~  155 (192)
                      .-++.+.|||+||+.|+|..-|..++++..++-.+-..-       .    ..-+|+++.||+..-
T Consensus       242 ariarvvvhpdyr~dglg~~sv~~a~ewI~eRriPEmr~rkHlvetiaqmarynpffe~~gfkylw  307 (593)
T COG2401         242 ARIARVVVHPDYRADGLGQLSVIAALEWIIERRIPEMRPRKHLVETIAQMARYNPFFEKVGFKYLW  307 (593)
T ss_pred             HHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHHHCEEEEE
T ss_conf             430678856654567610637999999999851802324565999999987507455430303665


No 71 
>pfam01853 MOZ_SAS MOZ/SAS family. This region of these proteins has been suggested to be homologous to acetyltransferases.
Probab=94.33  E-value=0.09  Score=30.26  Aligned_cols=60  Identities=32%  Similarity=0.428  Sum_probs=41.8

Q ss_pred             CCEEEEEEE----CCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             607899998----898999999877611882238997678851113899589999999999961388
Q gi|254781162|r   72 LSLSFLCAE----GKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGS  134 (192)
Q Consensus        72 ~~lslVA~~----~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~  134 (192)
                      +-+-+|..+    |-.+||+  ||+-.. ..+.+-|+-+-|.|.||++|+|+-||.-+-..++..|.
T Consensus        51 ~FlFYVl~e~d~~g~h~vGy--FSKEk~-s~~~~NLaCIltlP~~QrkGyG~~LI~fSY~LSr~E~~  114 (189)
T pfam01853        51 PFLFYILTETDETGCHIVGY--FSKEKE-SSENYNLACILTLPPYQRKGYGKLLIDFSYELSRKEGK  114 (189)
T ss_pred             CEEEEEEEEECCCCCEEEEE--ECHHHC-CCCCCCEEEEEECCHHHHCCHHHHHHHHHHHHHHHCCC
T ss_conf             55999999855998588766--311003-55567347899638788525233226555026565388


No 72 
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.47  E-value=0.59  Score=25.48  Aligned_cols=119  Identities=22%  Similarity=0.189  Sum_probs=75.3

Q ss_pred             EECCHHHHHHHHHH---HCCC--C-CCCCEEEEEECCCCCCCCEEEEE-EECCEEEEEEEEEEEEE------------C-
Q ss_conf             20798999999998---5389--8-72100131103888876078999-98898999999877611------------8-
Q gi|254781162|r   37 RLEHDSSICAMHAD---SFGP--G-RFVRAAVLLREQGMHDLSLSFLC-AEGKRIVGSVRMTPISI------------E-   96 (192)
Q Consensus        37 R~e~~~di~ai~~~---~fgp--g-r~~~~~~~lR~~~~~~~~lslVA-~~~~~IVG~i~~~pv~~------------~-   96 (192)
                      +.+.+..+++++.+   +|.-  + .-.-...--.++-++..+.-+++ -.+|+|+|++++-|..-            + 
T Consensus        10 ~~~~~~~l~em~rlR~~vF~erL~W~v~~~~g~E~DqyD~~~t~Yll~~~~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~   89 (209)
T COG3916          10 RELFPKALEEMHRLRYQVFKERLGWDVVCIDGFEIDQYDNLDTVYLLALTSDGRIVGCVRLLPTTGPYMLTDVFPALLEG   89 (209)
T ss_pred             CHHCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHCC
T ss_conf             20157999999888999988754771031688440146788852899985899689899863677852555056898469


Q ss_pred             C-----CCEEEEEEEEECC--CCCCCC----HHHHHHHHHHHHHHHCCCCEEEEEECH---HHHHHCCCEECC
Q ss_conf             8-----2238997678851--113899----589999999999961388479984086---578742948746
Q gi|254781162|r   97 K-----ITGHLLGPIVVHP--LYQNKG----IGRKLISMSVDAAEKKGSQVIVLVGDI---AYYSKLGFQAVP  155 (192)
Q Consensus        97 ~-----~~~~~LgplaV~P--~~rg~G----iG~~Li~~~l~~a~~~g~~~v~l~g~~---~yY~rfGF~~~~  155 (192)
                      +     .....+...+|++  .-+..|    ++..|+.-.++.+.+.|+..++.+.+.   ....|.||....
T Consensus        90 ~~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~~G~~~IvtVt~~~meril~r~Gw~~~r  162 (209)
T COG3916          90 GPPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALARGITGIVTVTDTGMERILRRAGWPLTR  162 (209)
T ss_pred             CCCCCCCCEEEEEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCEEE
T ss_conf             9999998827876455156425334289548899999999999997699659999700899999984997087


No 73 
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=93.02  E-value=0.44  Score=26.24  Aligned_cols=75  Identities=15%  Similarity=0.192  Sum_probs=50.8

Q ss_pred             EEEEECCEEEEEEEEEEE-EECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE--EC--HHHHHHCC
Q ss_conf             999988989999998776-11882238997678851113899589999999999961388479984--08--65787429
Q gi|254781162|r   76 FLCAEGKRIVGSVRMTPI-SIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLV--GD--IAYYSKLG  150 (192)
Q Consensus        76 lVA~~~~~IVG~i~~~pv-~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~--g~--~~yY~rfG  150 (192)
                      +....||.+||.+.+..- -....--..++...+...||++|+|++-.++.-..+  +|...|..+  ..  .++++++-
T Consensus        40 ~~~~~~~~~igf~l~L~~~~~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~--~g~w~Va~i~EN~PA~~fwK~~~  117 (143)
T COG5628          40 WLFRIGGLPVGFALVLDLAHSPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSA--WGVWQVATVRENTPARAFWKRVA  117 (143)
T ss_pred             EEEEECCCCEEEEEEECCCCCCCCCCCCCCEEEEEEHHHCCCHHHHHHHHHHHHH--HCEEEEEEECCCCCHHHHHHHCC
T ss_conf             5999889414553443256888743236200687604304665399999999876--14589999527880688998620


Q ss_pred             CE
Q ss_conf             48
Q gi|254781162|r  151 FQ  152 (192)
Q Consensus       151 F~  152 (192)
                      ..
T Consensus       118 ~t  119 (143)
T COG5628         118 ET  119 (143)
T ss_pred             CC
T ss_conf             22


No 74 
>KOG3698 consensus
Probab=93.00  E-value=0.7  Score=25.05  Aligned_cols=149  Identities=15%  Similarity=0.073  Sum_probs=93.0

Q ss_pred             HHHHHCCCCCEEEEEEECCCHHHHCCEEEEEECCHHHHHHHHHHHCC----CCCC--CC--EEEEEECCC----CCCCCE
Q ss_conf             24311034322467642150332012034420798999999998538----9872--10--013110388----887607
Q gi|254781162|r    7 ELRKFLSIAFFEFICWRRSRWQKIGAFFLERLEHDSSICAMHADSFG----PGRF--VR--AAVLLREQG----MHDLSL   74 (192)
Q Consensus         7 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~R~e~~~di~ai~~~~fg----pgr~--~~--~~~~lR~~~----~~~~~l   74 (192)
                      |.-|.++.|..-=+++.+....-..+++.||+=..+|-+.+..++-.    -|+.  -+  +.+..+--.    .-.+.|
T Consensus       653 e~qRllpvd~~ndlf~~~~p~~Pt~~~y~iRPy~~~De~~v~~~ct~my~d~g~~lpf~n~pn~~~d~liggllsls~~l  732 (891)
T KOG3698         653 ETQRLLPVDDDNDLFLSNKPFLPTCMFYDIRPYTIADEEYVSGMCTVMYTDNGELLPFRNAPNFADDNLIGGLLSLSEHL  732 (891)
T ss_pred             HHHHCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHEECCCCEECCCCCCCCCCCCCCHHHEECCCHHH
T ss_conf             66440345787630322787786310576216766458999756661342586033578887500135422112257556


Q ss_pred             EEEEEE-CCEEEEEEEEE----EEE----E-----------------C-C-------------------CCEEEEEE---
Q ss_conf             899998-89899999987----761----1-----------------8-8-------------------22389976---
Q gi|254781162|r   75 SFLCAE-GKRIVGSVRMT----PIS----I-----------------E-K-------------------ITGHLLGP---  105 (192)
Q Consensus        75 slVA~~-~~~IVG~i~~~----pv~----~-----------------~-~-------------------~~~~~Lgp---  105 (192)
                      |+|+.+ +++|||+..-+    +..    +                 + +                   ..++---|   
T Consensus       733 C~v~~de~~~i~gYa~a~~Dvt~F~rn~~i~w~~~l~EKY~~~i~p~~~g~~~~~~~e~i~~S~h~~~~~~~~~~~P~~~  812 (891)
T KOG3698         733 CEVVDDEGHKIVGYASAHFDVTLFSRNFLITWKEKLKEKYRGLIEPIGSGKLTDEYIEFIQNSQHPMDIEEWYPKIPDQI  812 (891)
T ss_pred             EEEEECCCCCEEEEEEEECCCCHHHHCEEEEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCHHH
T ss_conf             36552479966677642001221000315654798899864455666786007999999987058430000131380888


Q ss_pred             ---------EEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC------HHHHHHCCCEECC
Q ss_conf             ---------7885111389958999999999996138847998408------6578742948746
Q gi|254781162|r  106 ---------IVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGD------IAYYSKLGFQAVP  155 (192)
Q Consensus       106 ---------laV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~------~~yY~rfGF~~~~  155 (192)
                               ...+-+.-..++.+++|+-.+..+++.|....++.-.      ..||.++||..+.
T Consensus       813 ~~nfPa~v~~~~~~~a~D~~~~k~m~~vll~tL~aNGsrGaf~~V~~dD~~~~~fys~lG~~d~~  877 (891)
T KOG3698         813 FENFPAWVETYFGMDASDAHPMKKMIQVLLVTLAANGSRGAFLTVAIDDIERQKFYSELGLTDLG  877 (891)
T ss_pred             HHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCHHHHH
T ss_conf             70370877321353445650789999999999873587511587551378999999871558776


No 75 
>PTZ00064 histone acetyltransferase; Provisional
Probab=92.80  E-value=0.24  Score=27.79  Aligned_cols=59  Identities=25%  Similarity=0.343  Sum_probs=41.5

Q ss_pred             CCCEEEEEEE----CCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             7607899998----898999999877611882238997678851113899589999999999961388
Q gi|254781162|r   71 DLSLSFLCAE----GKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGS  134 (192)
Q Consensus        71 ~~~lslVA~~----~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~  134 (192)
                      ++.|-+|..+    |-.+||+  ||+-..   ..+-|+.+-+.|.||++|+|+.||.-+-..++..|.
T Consensus       268 epFlFYVl~e~D~~G~HivGY--FSKEK~---s~~NlaCIltLP~yQrkGyGklLI~fSYeLSk~Egk  330 (442)
T PTZ00064        268 ELFIFYVMTEVDENGYHITGY--FSKEKH---SHNNVSCILSLPQHQRKGYGKLLTAFSYLLSLKEGK  330 (442)
T ss_pred             CCEEEEEEEEECCCCCEEEEE--ECHHHC---CCCCEEEEEECCHHHHCCCCHHHHHHHHHHHHCCCC
T ss_conf             755799998855998468888--444323---566625889547788515001124446456431576


No 76 
>pfam01233 NMT Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold.
Probab=92.73  E-value=0.77  Score=24.82  Aligned_cols=100  Identities=12%  Similarity=0.111  Sum_probs=64.0

Q ss_pred             CCHHHHHHHHHHH---C-----CCCCCCCEEEEEE--CCCCC-CCCEE--EEEEECCEEEEEEEEEEEEE--CC--CCEE
Q ss_conf             7989999999985---3-----8987210013110--38888-76078--99998898999999877611--88--2238
Q gi|254781162|r   39 EHDSSICAMHADS---F-----GPGRFVRAAVLLR--EQGMH-DLSLS--FLCAEGKRIVGSVRMTPISI--EK--ITGH  101 (192)
Q Consensus        39 e~~~di~ai~~~~---f-----gpgr~~~~~~~lR--~~~~~-~~~ls--lVA~~~~~IVG~i~~~pv~~--~~--~~~~  101 (192)
                      +.+.+.+.++++-   |     +..||..+...++  +..+. ..+..  .-...++++||+|.-.|+.+  .+  ....
T Consensus        32 ~d~~~l~Evy~lL~~nYVEDdd~~FRF~YS~efL~Wal~~Pg~~~~whvGVR~~~s~kLvgfIs~iP~~irv~~~~~~~~  111 (162)
T pfam01233        32 DDEEQLKELYVLLNENYVEDDDAMFRFNYSPEFLNWALKPPGWRPDWHCGVRVKSTGKLVAFISAIPATIRVRDKTVKMV  111 (162)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEECCEEEEEEECCEEEEE
T ss_conf             99899999999998615148776598867999998763498988645899998779909999704148999926484578


Q ss_pred             EEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEE
Q ss_conf             9976788511138995899999999999613884799
Q gi|254781162|r  102 LLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIV  138 (192)
Q Consensus       102 ~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~  138 (192)
                      .+.-|+||+.+|.+++.--|+++.-.++..+|....+
T Consensus       112 eINFLCVhkklRskrLAPvLIkEItRRvn~~gIwQAv  148 (162)
T pfam01233       112 EINFLCVHKKLRSKRLAPVLIKEITRRVNLTGIWQAL  148 (162)
T ss_pred             EEEEEEECHHHHHCCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf             8999887044553577438999988872006756999


No 77 
>pfam09390 DUF1999 Protein of unknown function (DUF1999). This family contains a putative Fe-S binding reductase whose structure adopts an alpha and beta fold.
Probab=92.70  E-value=0.39  Score=26.55  Aligned_cols=121  Identities=14%  Similarity=0.030  Sum_probs=77.2

Q ss_pred             EEEEECCHHHHHHHHHHHCCCCC-----CCCEEEEEECC----------CCCCCCEEEEEE-ECCEEEEEEEEEEEEECC
Q ss_conf             34420798999999998538987-----21001311038----------888760789999-889899999987761188
Q gi|254781162|r   34 FLERLEHDSSICAMHADSFGPGR-----FVRAAVLLREQ----------GMHDLSLSFLCA-EGKRIVGSVRMTPISIEK   97 (192)
Q Consensus        34 ~~~R~e~~~di~ai~~~~fgpgr-----~~~~~~~lR~~----------~~~~~~lslVA~-~~~~IVG~i~~~pv~~~~   97 (192)
                      |..|+=.+.|.+++.++-.+.-|     |.-.-.+-|++          .-.-+..||||+ +++.+.|++.-.++..+.
T Consensus         1 MryR~F~e~D~~~lqaldla~qr~~~P~yd~lPere~~grl~~SL~alrfyeRsgHSF~Ae~e~e~~~Gf~lAQavWqGd   80 (161)
T pfam09390         1 MRYRPFTEPDLERLQALDLAEQRRTAPEYDVLPEREQAGRLSVSLGALRFYERSGHSFVAEGEGEEPMGFALAQAVWQGD   80 (161)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCEEEECCCCCEEEEEEHHHHHCCC
T ss_conf             97555675009999987888742479633446114541645554245543431476035446887645564313565488


Q ss_pred             CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHH---HHHCCCEECC
Q ss_conf             223899767885111389958999999999996138847998408657---8742948746
Q gi|254781162|r   98 ITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGDIAY---YSKLGFQAVP  155 (192)
Q Consensus        98 ~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~~~y---Y~rfGF~~~~  155 (192)
                      .+..++-.+.. .+-+..+.-+.|+++..+-|-..+.--+-+.=+|+.   -..-||...+
T Consensus        81 rptVl~~~ivl-~~~~~e~~~~gLL~AvvKSAYDaaVYEvhlpl~P~L~~Aa~~e~a~l~g  140 (161)
T pfam09390        81 RPTVLVRAIVL-DEGRSEDALRGLLRAVVKSAYDAAVYEVHLPLDPELEAAARAEEAALTG  140 (161)
T ss_pred             CCEEEEEEEEC-CCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCCC
T ss_conf             73599998742-7898689999999999987521225787425898999999850234365


No 78 
>KOG2747 consensus
Probab=92.46  E-value=0.43  Score=26.27  Aligned_cols=61  Identities=30%  Similarity=0.411  Sum_probs=43.3

Q ss_pred             CCCEEEEEEECC--EEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             760789999889--8999999877611882238997678851113899589999999999961388
Q gi|254781162|r   71 DLSLSFLCAEGK--RIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGS  134 (192)
Q Consensus        71 ~~~lslVA~~~~--~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~  134 (192)
                      ++.|-+|..+.+  ..||+  ||+ .....+.+-|+-+-|.|.||++|+|+.||+-.-...|..|.
T Consensus       232 dpFlFYVLte~d~~G~VGY--FSK-EK~s~~~yNlaCILtLPpyQRkGYGklLIdFSYeLSr~E~~  294 (396)
T KOG2747         232 DPFLFYVLTECDSYGCVGY--FSK-EKESSENYNLACILTLPPYQRKGYGKLLIDFSYELSRREGK  294 (396)
T ss_pred             CCEEEEEEEECCCCEEEEE--ECC-CCCCCCCCCEEEEEECCHHHHCCCCHHHHHHHHHHHHCCCC
T ss_conf             7638999996288406677--224-55674456447899557466255112189888798733476


No 79 
>KOG4135 consensus
Probab=92.19  E-value=0.58  Score=25.55  Aligned_cols=94  Identities=17%  Similarity=0.231  Sum_probs=54.3

Q ss_pred             EECCCCCCCCEEEEEEEC-------CEEEEEEEEEEEEE----CCCCEEEEEE---EEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf             103888876078999988-------98999999877611----8822389976---788511138995899999999999
Q gi|254781162|r   64 LREQGMHDLSLSFLCAEG-------KRIVGSVRMTPISI----EKITGHLLGP---IVVHPLYQNKGIGRKLISMSVDAA  129 (192)
Q Consensus        64 lR~~~~~~~~lslVA~~~-------~~IVG~i~~~pv~~----~~~~~~~Lgp---laV~P~~rg~GiG~~Li~~~l~~a  129 (192)
                      +|+..+....+.+-|+.+       +..||-+.+.-...    +..+.+..|-   +.-.|.-||+|+|+.-+...+.++
T Consensus        57 W~~DeDKlTFIVLdaE~~ea~~~ev~~MvGDvNlFlt~~~~~~n~s~~~~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~  136 (185)
T KOG4135          57 WREDEDKLTFIVLDAEMNEAGEDEVDHMVGDVNLFLTTSPDTENPSDDVITGEVEVMIAEPRGRGKGIGTEAVRAMLAYA  136 (185)
T ss_pred             HCCCCCCEEEEEEECHHCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHH
T ss_conf             20477614899983020235750576641330368752777688643425455899980555567773188999999999


Q ss_pred             HHC-CCCEE-EEE--EC---HHHHHHCCCEECCCC
Q ss_conf             613-88479-984--08---657874294874636
Q gi|254781162|r  130 EKK-GSQVI-VLV--GD---IAYYSKLGFQAVPWK  157 (192)
Q Consensus       130 ~~~-g~~~v-~l~--g~---~~yY~rfGF~~~~~~  157 (192)
                      ... +..-- +-+  ++   ..+|.+|+|..+...
T Consensus       137 ~s~l~l~Ky~vkig~~nk~sl~lFkk~~f~q~~~n  171 (185)
T KOG4135         137 YSVLKLDKYEVKIGMDNKPSLRLFKKFLFTQVFYN  171 (185)
T ss_pred             HHHHHHHEEEEEECCCCCHHHHHHHHHHHEEEEEE
T ss_conf             98740204899725888627899997534045320


No 80 
>TIGR01686 FkbH FkbH domain; InterPro: IPR010037   This entry describes a domain of unknown function. One of proteins with this domain is a modular polyketide synthase, which is 4800 amino acids in length from Streptomyces avermilitis, where the domain is the C-terminal segment. By contrast, the FkbH protein from Streptomyces hygroscopicus (Q84G18 from SWISSPROT) apparently contains only this domain. The remaining members of the family all contain an additional N-terminal domain of between 200 and 275 amino acids, which show less than 20 0dentity to one another. It seems likely then that these proteins are involved in disparate functions, probably the biosynthesis of different natural products. For instance, the FkbH gene is found in a gene cluster believed to be responsible for the biosynthesis of unusual 'PKS extender units' in the ascomycin pathway . This domain is composed of two parts, the first of which is a member of subfamily IIIC of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. All of the characterised enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases  are present in this domain. The C-terminal portion of this domain is unique to this family (by BLAST)..
Probab=90.81  E-value=0.65  Score=25.24  Aligned_cols=124  Identities=15%  Similarity=0.222  Sum_probs=83.8

Q ss_pred             CHHHHCCEEEEEECCHHHHHHHHHHHCCCCCCC-------CEEEE-EECCCCCCCCEEEEEEE---CCEEEEEEEEEEEE
Q ss_conf             033201203442079899999999853898721-------00131-10388887607899998---89899999987761
Q gi|254781162|r   26 RWQKIGAFFLERLEHDSSICAMHADSFGPGRFV-------RAAVL-LREQGMHDLSLSFLCAE---GKRIVGSVRMTPIS   94 (192)
Q Consensus        26 ~~~~~~~~~~~R~e~~~di~ai~~~~fgpgr~~-------~~~~~-lR~~~~~~~~lslVA~~---~~~IVG~i~~~pv~   94 (192)
                      ..+.+.+.|.++.-...+|..++.++-.-.-|.       ..... .+.......-+++-+.+   +.-+||.+.+.+  
T Consensus       190 yL~~Lel~l~~~~~~~~~v~Rv~~L~~rTnQf~~~~~~~~~~dl~~~~~~~s~~~v~~~~~~DrfgD~G~vG~~~~~~--  267 (337)
T TIGR01686       190 YLKKLELSLDISKLKEEEVQRVEELVRRTNQFNLTAERLDEEDLKQTMEEESAEEVLTVAMSDRFGDSGLVGILLLEK--  267 (337)
T ss_pred             HHHHHCCEEEHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEEEEEC--
T ss_conf             874010054210136213604888731133231210136777899984489853899998641458876089999852--


Q ss_pred             ECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHH---HCCCCEEEEEEC--------HHHHHHCCCEE
Q ss_conf             188223899767885111389958999999999996---138847998408--------65787429487
Q gi|254781162|r   95 IEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAE---KKGSQVIVLVGD--------IAYYSKLGFQA  153 (192)
Q Consensus        95 ~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~---~~g~~~v~l~g~--------~~yY~rfGF~~  153 (192)
                        +...+.+--+++.=--=++|++..+++.+.++|.   ..|...+.+.-.        ..+|+..||.-
T Consensus       268 --~e~~l~i~~l~~SCR~l~r~~e~~~L~~l~d~A~hff~~g~~~~~~~y~~T~rN~~~~~~~~~~g~~~  335 (337)
T TIGR01686       268 --KEGQLVIKDLVMSCRVLGRGVEERLLRWLVDQAKHFFELGAHKVRLIYRRTERNVPVESFYEELGFED  335 (337)
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHCCCC
T ss_conf             --87515287676640141011679999999998899998413540310068987768999999853123


No 81 
>KOG2779 consensus
Probab=90.31  E-value=0.54  Score=25.71  Aligned_cols=99  Identities=13%  Similarity=0.096  Sum_probs=63.9

Q ss_pred             EECCHHHHHHHHHHH---C-----CCCCCCCEEEEEECCCCC---CCCEEEEE--EECCEEEEEEEEEEEEEC--C--CC
Q ss_conf             207989999999985---3-----898721001311038888---76078999--988989999998776118--8--22
Q gi|254781162|r   37 RLEHDSSICAMHADS---F-----GPGRFVRAAVLLREQGMH---DLSLSFLC--AEGKRIVGSVRMTPISIE--K--IT   99 (192)
Q Consensus        37 R~e~~~di~ai~~~~---f-----gpgr~~~~~~~lR~~~~~---~~~lslVA--~~~~~IVG~i~~~pv~~~--~--~~   99 (192)
                      -.++..|++.+.++-   +     .--||..+.+.++=...+   ..+.....  ....++||.|.--|..+.  +  ..
T Consensus        87 dv~~~~~l~el~~lL~enyVEd~~~m~rf~Ys~eFl~Wal~~pg~~~~WHiGVRv~~s~kLVaFIsaiP~~irvrdk~vk  166 (421)
T KOG2779          87 DVSDFKDLEELYNLLNENYVEDDDSMFRFDYSPEFLKWALQPPGWKKEWHIGVRVKSSKKLVAFISAIPATIRVRDKVVK  166 (421)
T ss_pred             CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEECCCCEEEECCCEEE
T ss_conf             77507679999865214777766321122045898876404999762137999970377258998525317887142655


Q ss_pred             EEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf             389976788511138995899999999999613884
Q gi|254781162|r  100 GHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQ  135 (192)
Q Consensus       100 ~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~  135 (192)
                      .+.+.-|+||...|++++.--|+++.-.++...|..
T Consensus       167 ~veINFLCVHKkLRSKRlaPvLIrEITRRvnl~gIf  202 (421)
T KOG2779         167 MVEINFLCVHKKLRSKRLAPVLIREITRRVNLEGIF  202 (421)
T ss_pred             EEEEEEEEEEHHHHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             645788997333301665307788887774044266


No 82 
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=89.94  E-value=0.78  Score=24.77  Aligned_cols=124  Identities=13%  Similarity=0.150  Sum_probs=71.7

Q ss_pred             HHHCCEEEEEECCHHHHHHHHHHH-----CC--CCCCCCEEEEEECCCCCCCCEEEEEEE---CCEEEEEEEEEEEEECC
Q ss_conf             320120344207989999999985-----38--987210013110388887607899998---89899999987761188
Q gi|254781162|r   28 QKIGAFFLERLEHDSSICAMHADS-----FG--PGRFVRAAVLLREQGMHDLSLSFLCAE---GKRIVGSVRMTPISIEK   97 (192)
Q Consensus        28 ~~~~~~~~~R~e~~~di~ai~~~~-----fg--pgr~~~~~~~lR~~~~~~~~lslVA~~---~~~IVG~i~~~pv~~~~   97 (192)
                      +.+.+-+..+.-+..+|..|-.++     |.  .-|+++...+.--.......+|+-..+   ++-|||.+-+..-   .
T Consensus       408 K~Lem~l~vs~~de~~i~RIsQLtqkTNQFnlTtkRy~e~dV~~~~~~~~~li~sv~l~DKfgDnGiigvviv~kk---~  484 (574)
T COG3882         408 KNLEMRLTVSKFDEVNIPRISQLTQKTNQFNLTTKRYNEEDVRQMQEDPNFLIFSVSLKDKFGDNGIIGVVIVEKK---E  484 (574)
T ss_pred             HHHEEEEEEEECCCCCCHHHHHHHHHCCCEEECHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEEEEEEC---C
T ss_conf             7233799984145558488999862043005225441488899873187717999986123467855899999931---8


Q ss_pred             CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC--------HHHHHHCCCEECC
Q ss_conf             223899767885111389958999999999996138847998408--------6578742948746
Q gi|254781162|r   98 ITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGD--------IAYYSKLGFQAVP  155 (192)
Q Consensus        98 ~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~--------~~yY~rfGF~~~~  155 (192)
                      ..+ .+--+...=-.-|+++-.+||..+.+.|...|...+...=.        .+||++.||+-..
T Consensus       485 ~~w-~IDt~lmSCRVlgRkvE~~l~~~~~e~A~~~gi~tir~~Y~pt~kN~pv~~FyE~mgf~l~~  549 (574)
T COG3882         485 SEW-FIDTFLMSCRVLGRKVEQRLMNSLEEQALSEGINTIRGYYIPTEKNAPVSDFYERMGFKLKG  549 (574)
T ss_pred             CEE-EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHCHHHCC
T ss_conf             727-76788998999866789999999999998646322235864643578389999873500013


No 83 
>COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism]
Probab=88.97  E-value=1.1  Score=23.86  Aligned_cols=90  Identities=16%  Similarity=0.198  Sum_probs=57.7

Q ss_pred             EEEEECCHHHHHHHHHHHCCC--C------CC---------CCEEEEEECCCCCCCCEEEEEEE--CCEEEEEEEEE---
Q ss_conf             344207989999999985389--8------72---------10013110388887607899998--89899999987---
Q gi|254781162|r   34 FLERLEHDSSICAMHADSFGP--G------RF---------VRAAVLLREQGMHDLSLSFLCAE--GKRIVGSVRMT---   91 (192)
Q Consensus        34 ~~~R~e~~~di~ai~~~~fgp--g------r~---------~~~~~~lR~~~~~~~~lslVA~~--~~~IVG~i~~~---   91 (192)
                      +.+|+-..+|++++..++-..  |      ..         ++.++.- +-.++...+-||.|+  .|+++|....-   
T Consensus         2 lvvRP~~~aDl~al~~LA~~sg~G~TsLP~de~~L~~Ri~~se~sf~~-~~~~ge~~Y~fVLEDsetG~VvG~saI~a~v   80 (336)
T COG3138           2 LVVRPVERADLEALMELAVKTGVGLTSLPADEATLRARIERSEKSFQG-ELPPGEAGYLFVLEDSETGTVVGISAIEAAV   80 (336)
T ss_pred             CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC-CCCCCCCCEEEEEEECCCCEEEEEEEEEEEC
T ss_conf             613223203789999999865998535877789999999988887735-5678776289999845777287677788740


Q ss_pred             -------EEEE-------------CCCC----------EEEEEEEEECCCCCCCCHHHHHHHH
Q ss_conf             -------7611-------------8822----------3899767885111389958999999
Q gi|254781162|r   92 -------PISI-------------EKIT----------GHLLGPIVVHPLYQNKGIGRKLISM  124 (192)
Q Consensus        92 -------pv~~-------------~~~~----------~~~LgplaV~P~~rg~GiG~~Li~~  124 (192)
                             ..++             +..+          .-.++.+.++|+||.-+.|+.|-+.
T Consensus        81 Gl~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~sLFl~pd~Rkg~nG~Llsr~  143 (336)
T COG3138          81 GLNDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELCTLFLDPDWRKGGNGRLLSKS  143 (336)
T ss_pred             CCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHEEECHHHHCCCCHHHHHHH
T ss_conf             357765111453335327433641021179985266684245411506767335450024430


No 84 
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase; InterPro: IPR005216   [Citrate (pro-3S)-lyase] ligase (6.2.1.22 from EC), also known as citrate lyase ligase, is responsible for acetylation of the prosthetic group (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase converting the inactive thiol form of the enzyme to the active form. ; GO: 0008771 [citrate (pro-3S)-lyase] ligase activity.
Probab=87.71  E-value=2.2  Score=22.20  Aligned_cols=80  Identities=15%  Similarity=0.280  Sum_probs=64.5

Q ss_pred             CCCCCEEEEEEEC-CEEEEEEEEEEEEECCCCEEEEEEEEECCCCC-CCC-HHHHHHHHHHHHHHHCCCCEEEEEECHH-
Q ss_conf             8876078999988-98999999877611882238997678851113-899-5899999999999613884799840865-
Q gi|254781162|r   69 MHDLSLSFLCAEG-KRIVGSVRMTPISIEKITGHLLGPIVVHPLYQ-NKG-IGRKLISMSVDAAEKKGSQVIVLVGDIA-  144 (192)
Q Consensus        69 ~~~~~lslVA~~~-~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~r-g~G-iG~~Li~~~l~~a~~~g~~~v~l~g~~~-  144 (192)
                      ....++..++..+ .+++|+-.+        .+-.+-.+++.+..+ |.| +...|+...+..+...+..-.++...|. 
T Consensus        28 ~~~~~~~~~~~~~~~~~~~~g~~--------~g~~~~~~~~~~~~~~g~g~~~~~l~~~l~~~~~~~~~~~~~~~~~p~~   99 (342)
T TIGR00124        28 DAPLEVFIVVYEDNEELVGCGGI--------AGNVIKCVAIDESLRSGEGTLALQLLTELLNLAYELGRPHLFLFTKPEY   99 (342)
T ss_pred             CCCCEEEEEEEECCCEEEEECCC--------CCCCEEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECHHH
T ss_conf             55412688875057504650320--------0000001230300103421578999999998877515630356512256


Q ss_pred             --HHHHCCCEECCC
Q ss_conf             --787429487463
Q gi|254781162|r  145 --YYSKLGFQAVPW  156 (192)
Q Consensus       145 --yY~rfGF~~~~~  156 (192)
                        .|...||.....
T Consensus       100 ~~~~~~~g~~~~~~  113 (342)
T TIGR00124       100 AALFEGCGFWTLAE  113 (342)
T ss_pred             HHHHHHCCCCEECC
T ss_conf             77764326400103


No 85 
>pfam06852 DUF1248 Protein of unknown function (DUF1248). This family represents a conserved region within a number of proteins of unknown function that seem to be specific to C. elegans. Note that some family members contain more than one copy of this region.
Probab=87.58  E-value=2.2  Score=22.15  Aligned_cols=90  Identities=17%  Similarity=0.332  Sum_probs=58.2

Q ss_pred             EECCCCCCCCEEEEEEEC-CEEEE---EEEEEEEEEC-CCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEE-
Q ss_conf             103888876078999988-98999---9998776118-82238997678851113899589999999999961388479-
Q gi|254781162|r   64 LREQGMHDLSLSFLCAEG-KRIVG---SVRMTPISIE-KITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVI-  137 (192)
Q Consensus        64 lR~~~~~~~~lslVA~~~-~~IVG---~i~~~pv~~~-~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v-  137 (192)
                      +++.-..+-.|-|++..| ++||.   +|-|.|+... +.+...+|-.-++|+|||+.+....-..+.+..+..+-..+ 
T Consensus        37 wk~sf~d~Y~l~l~clKgT~rvi~~~h~i~f~pL~~~~d~~~~f~G~~Wi~PdyR~~~~~~l~~~~~~~~~~~~~~N~~~  116 (180)
T pfam06852        37 WKDSFPDDYRLKLTCLKGTNRVIATFHTITFRPLPSSKDKPFVFLGFGWIDPDYRGKDIMKLTDDIAKEEERRKSDNAVA  116 (180)
T ss_pred             HHHHCCCCCEEEEEEECCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             99856756079999976998078874079853677789986289860346855464168998999998763375555313


Q ss_pred             -EEEECHHHHHH-CCCEE
Q ss_conf             -98408657874-29487
Q gi|254781162|r  138 -VLVGDIAYYSK-LGFQA  153 (192)
Q Consensus       138 -~l~g~~~yY~r-fGF~~  153 (192)
                       ...-...||.+ .|...
T Consensus       117 ~~~~~~~~fW~k~~G~~d  134 (180)
T pfam06852       117 QNNPPSMNFWKKLTGHSD  134 (180)
T ss_pred             CCCHHHHHHHHHHHCCCC
T ss_conf             268489999999509876


No 86 
>COG5653 Protein involved in cellulose biosynthesis (CelD) [Cell envelope biogenesis, outer membrane]
Probab=86.35  E-value=2.6  Score=21.74  Aligned_cols=84  Identities=19%  Similarity=0.103  Sum_probs=60.9

Q ss_pred             EEEEEECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEE-EEEECHHHHHHCCCEE
Q ss_conf             899998898999999877611882238997678851113899589999999999961388479-9840865787429487
Q gi|254781162|r   75 SFLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVI-VLVGDIAYYSKLGFQA  153 (192)
Q Consensus        75 slVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v-~l~g~~~yY~rfGF~~  153 (192)
                      -+..+.+|+||+.--.+.    +...+..--.+.+|++-.--=|..|+-..|+++..+|+... +.+|+..|=..+|=+.
T Consensus       274 l~gL~~G~~lvAV~~~lr----~~~t~h~~l~a~dpe~~~~SPG~~lf~d~i~~~~~~g~~~~DfgvG~q~YKR~~~~~~  349 (406)
T COG5653         274 LFGLHAGGRLVAVHGLLR----QGGTYHAWLGAIDPEFARASPGMLLFLDLIEWACGQGLARFDFGVGDQSYKRHWGDQS  349 (406)
T ss_pred             EEEEEECCEEEEEEEEEC----CCCEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHH
T ss_conf             998742777899886312----5877999750348778636954789999999986489717863589747877640378


Q ss_pred             CCCCCEECC
Q ss_conf             463653668
Q gi|254781162|r  154 VPWKSLILP  162 (192)
Q Consensus       154 ~~~~~l~~p  162 (192)
                      .-..++..|
T Consensus       350 tvl~~~~~~  358 (406)
T COG5653         350 TVLFGLLGA  358 (406)
T ss_pred             HHHHHHHCC
T ss_conf             899876415


No 87 
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=85.43  E-value=0.51  Score=25.84  Aligned_cols=58  Identities=29%  Similarity=0.374  Sum_probs=37.2

Q ss_pred             CCCEEEEEEECC----EEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             760789999889----8999999877611882238997678851113899589999999999961
Q gi|254781162|r   71 DLSLSFLCAEGK----RIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEK  131 (192)
Q Consensus        71 ~~~lslVA~~~~----~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~  131 (192)
                      ++-+-+|..+.|    .+||+  ||+-. .+...+-|+.+-+.|.||++|+|..||+-.-...+.
T Consensus       232 DpflFYvl~~~~~~~~h~vGy--FSKEK-~S~~~yNLaCILtLP~yQRrGYG~lLIdFSY~Ls~~  293 (395)
T COG5027         232 DPFLFYVLTERGDTGCHLVGY--FSKEK-ESEQDYNLACILTLPPYQRRGYGKLLIDFSYLLSQK  293 (395)
T ss_pred             CCEEEEEEEECCCCCEEEEEE--ECHHH-CCCCCCCEEEEEECCHHHHCCCCEEEEEEEEECCCC
T ss_conf             655999999738754035666--33211-354567557999657567066445755542201014


No 88 
>pfam05301 Mec-17 Touch receptor neuron protein Mec-17. Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor. This family is conserved to higher eukaryotes.
Probab=83.48  E-value=1.4  Score=23.34  Aligned_cols=51  Identities=18%  Similarity=0.157  Sum_probs=32.4

Q ss_pred             CEEEEEEEEEEEE----E-CC-----CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             9899999987761----1-88-----22389976788511138995899999999999613
Q gi|254781162|r   82 KRIVGSVRMTPIS----I-EK-----ITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKK  132 (192)
Q Consensus        82 ~~IVG~i~~~pv~----~-~~-----~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~  132 (192)
                      +.|+|-.....=.    . .+     .+++-+=..+|+++.|++|+|.+|.++.+..-.-.
T Consensus        18 g~v~G~LKvG~K~Lfl~d~~g~~~e~~~~~CvLDFYVhes~QR~G~Gk~Lf~~ML~~e~~~   78 (120)
T pfam05301        18 SALKGLLKVGYKKLFLFDNEGNTYEVEQTPCILDFYVHESRQRSGNGKKLFDEMLKKENVE   78 (120)
T ss_pred             CEEEEEEEEEEEEEEEECCCCCEEEECCCCEEEEEEECHHHHCCCCHHHHHHHHHHHCCCC
T ss_conf             1699999874035889989999888516758999998024624575799999999871998


No 89 
>KOG2036 consensus
Probab=82.42  E-value=1.4  Score=23.25  Aligned_cols=77  Identities=23%  Similarity=0.345  Sum_probs=46.1

Q ss_pred             EEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEE----------------------------------EE--------
Q ss_conf             997678851113899589999999999961388479----------------------------------98--------
Q gi|254781162|r  102 LLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVI----------------------------------VL--------  139 (192)
Q Consensus       102 ~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v----------------------------------~l--------  139 (192)
                      -+-.+||||+||+.|+|++-++-..+.-..+....-                                  .|        
T Consensus       616 RIVRIAvhP~y~~MGYGsrAvqLL~~y~eG~~~~i~e~~~~~~~~~k~v~e~~~vsllee~i~pR~~lppLL~~L~er~p  695 (1011)
T KOG2036         616 RIVRIAVHPEYQKMGYGSRAVQLLTDYFEGKFTSISEDVLAVDHSIKRVEEAEKVSLLEEQIKPRKDLPPLLLKLSERPP  695 (1011)
T ss_pred             EEEEEEECCCHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCC
T ss_conf             17999856103113740889999999971558774544345675442034155445666533654579861557023897


Q ss_pred             ---------EEC----HHHHHHCCCEECCCCCEECCCCCCHHHEEEEECCCC
Q ss_conf             ---------408----657874294874636536689999566698435778
Q gi|254781162|r  140 ---------VGD----IAYYSKLGFQAVPWKSLILPAPVDPNRVLFLPLVQN  178 (192)
Q Consensus       140 ---------~g~----~~yY~rfGF~~~~~~~l~~p~pv~~~~~l~l~L~~~  178 (192)
                               +|-    ..|+.|-||.++--.+....-.-...-+|...|+++
T Consensus       696 erldylGvSfGLT~~L~kFWk~~gF~PvylrQt~n~lTGEHtcimLk~L~~~  747 (1011)
T KOG2036         696 ERLDYLGVSFGLTPSLLKFWKKNGFVPVYLRQTSNDLTGEHTCIMLKTLEGD  747 (1011)
T ss_pred             CCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEECCCCC
T ss_conf             6553231033678899999986696047763065402464458998258876


No 90 
>KOG2696 consensus
Probab=82.22  E-value=2.2  Score=22.14  Aligned_cols=41  Identities=20%  Similarity=0.353  Sum_probs=29.5

Q ss_pred             EEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECH
Q ss_conf             97678851113899589999999999961388479984086
Q gi|254781162|r  103 LGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGDI  143 (192)
Q Consensus       103 LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~~  143 (192)
                      +..+-+.|.||++|+|+.|++.....-...--..-+.+-+|
T Consensus       220 iSQmlilpPfq~~Glgs~l~E~i~r~~~~~p~v~DiTVEdP  260 (403)
T KOG2696         220 ISQMLILPPFQGKGLGSQLYEAIARDYLEEPTVLDITVEDP  260 (403)
T ss_pred             HHEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             41257736556775478999999886405983258873382


No 91 
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=81.57  E-value=4.1  Score=20.53  Aligned_cols=90  Identities=12%  Similarity=0.043  Sum_probs=64.0

Q ss_pred             EEECCCCCCCCEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE---
Q ss_conf             11038888760789999889899999987761188223899767885111389958999999999996138847998---
Q gi|254781162|r   63 LLREQGMHDLSLSFLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVL---  139 (192)
Q Consensus        63 ~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l---  139 (192)
                      .+.+.......+..|+..++.++|.+.+...   +...+-. =-+..++++.-.---.|.-++|..|.++|+...-.   
T Consensus       186 ~l~~~f~~~~~il~v~~~~g~~~ag~l~~~~---~~~v~~~-y~as~~~~r~~~~n~llyW~~i~~A~e~G~~~fDFGrS  261 (330)
T TIGR03019       186 LLKDVFGEDCEVLTVRLGDGVVASAVLSFYF---RDEVLPY-YAGGLREARDVAANDLMYWELMRRACERGLRVFDFGRS  261 (330)
T ss_pred             HHHHHCCCCCEEEEEEECCCCEEEEEEEEEC---CCEEEEE-EECCCHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCC
T ss_conf             9998616673799999279968999999952---9889996-53451988745814889999999999879968837999


Q ss_pred             ---EECHHHHHHCCCEECCC
Q ss_conf             ---40865787429487463
Q gi|254781162|r  140 ---VGDIAYYSKLGFQAVPW  156 (192)
Q Consensus       140 ---~g~~~yY~rfGF~~~~~  156 (192)
                         .|.-.|=+++||++.+-
T Consensus       262 ~~~~G~~~FKk~WG~~p~pl  281 (330)
T TIGR03019       262 KRGTGPFKFKKNWGFEPQPL  281 (330)
T ss_pred             CCCCCCHHHHHCCCCEEEEE
T ss_conf             99996867785379833201


No 92 
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=78.25  E-value=5.3  Score=19.89  Aligned_cols=68  Identities=13%  Similarity=0.100  Sum_probs=49.4

Q ss_pred             CCCCCCCCEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEE--ECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             388887607899998898999999877611882238997678--85111389958999999999996138847998
Q gi|254781162|r   66 EQGMHDLSLSFLCAEGKRIVGSVRMTPISIEKITGHLLGPIV--VHPLYQNKGIGRKLISMSVDAAEKKGSQVIVL  139 (192)
Q Consensus        66 ~~~~~~~~lslVA~~~~~IVG~i~~~pv~~~~~~~~~Lgpla--V~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l  139 (192)
                      ....+..+..+-...+|++||....-. ..++     |..|+  =+|++..+++|+-.+=..|+.|++.|...+.|
T Consensus       137 l~~s~~~t~~~e~~~~~~Li~v~v~D~-l~dg-----lSAVYtFyDP~~~~~SLGt~~IL~~I~~a~~~~l~y~YL  206 (241)
T PRK01305        137 LEDSWVNTRFIEFRLDGRLVAVAVTDV-LDDG-----LSAVYTFYDPDEEHRSLGTFAILWQIEQAKRLGLPYVYL  206 (241)
T ss_pred             HHCCCCCCEEEEEEECCCEEEEEEEEC-CCCC-----CCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             827898768999980894799999835-8864-----323601207565668975999999999999859986952


No 93 
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=77.88  E-value=5.5  Score=19.82  Aligned_cols=80  Identities=14%  Similarity=0.075  Sum_probs=54.8

Q ss_pred             CCCCEEEEEECC---CCCCCCEEEEEEECC--EEEEEEEEEEEEE--CC--CCEEEEEEEEECCCCCCCCHHHHHHHHHH
Q ss_conf             721001311038---888760789999889--8999999877611--88--22389976788511138995899999999
Q gi|254781162|r   56 RFVRAAVLLREQ---GMHDLSLSFLCAEGK--RIVGSVRMTPISI--EK--ITGHLLGPIVVHPLYQNKGIGRKLISMSV  126 (192)
Q Consensus        56 r~~~~~~~lR~~---~~~~~~lslVA~~~~--~IVG~i~~~pv~~--~~--~~~~~LgplaV~P~~rg~GiG~~Li~~~l  126 (192)
                      |++.+.+.++=.   .......+.+....+  ++||.|.--|..+  .+  ...+.+.-++|+.+.|++.+.-.|+++.-
T Consensus       112 rf~Y~~EFl~Wal~~pg~kK~whigvRvk~t~klVaFIsa~p~~v~vRgK~~~~~evNFLCihk~lRsKRltPvLIkEiT  191 (451)
T COG5092         112 RFRYSVEFLQWALDGPGGKKRWHIGVRVKGTQKLVAFISAKPHLVSVRGKRSSVLEVNFLCIHKELRSKRLTPVLIKEIT  191 (451)
T ss_pred             HHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEEEEECCEEEEEECCCCCCCCEEEEEEEEHHHHHCCCCHHHHHHHH
T ss_conf             79999999988633899742568999970453268897425058997263311003789997455530756208999998


Q ss_pred             HHHHHCCCC
Q ss_conf             999613884
Q gi|254781162|r  127 DAAEKKGSQ  135 (192)
Q Consensus       127 ~~a~~~g~~  135 (192)
                      .++...|..
T Consensus       192 RR~n~~~iw  200 (451)
T COG5092         192 RRANVDGIW  200 (451)
T ss_pred             HHHHHHHHH
T ss_conf             763144267


No 94 
>pfam04377 ATE_C Arginine-tRNA-protein transferase, C terminus. This family represents the C terminal region of the enzyme arginine-tRNA-protein transferase (EC 2.3.2.8), which catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N-end rule pathway of protein degradation by conjugating a destabilising amino acid to the amino terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N terminal cysteine is sometimes modified.
Probab=75.82  E-value=6.3  Score=19.48  Aligned_cols=65  Identities=11%  Similarity=0.144  Sum_probs=46.4

Q ss_pred             CCCCCEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEE--ECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             887607899998898999999877611882238997678--85111389958999999999996138847998
Q gi|254781162|r   69 MHDLSLSFLCAEGKRIVGSVRMTPISIEKITGHLLGPIV--VHPLYQNKGIGRKLISMSVDAAEKKGSQVIVL  139 (192)
Q Consensus        69 ~~~~~lslVA~~~~~IVG~i~~~pv~~~~~~~~~Lgpla--V~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l  139 (192)
                      .+..+.-+-...+|++||...+-.. .++-     ..|+  =+|++..+++|+-.+=.-|+.|+++|...+.|
T Consensus        35 s~~~t~~~eyr~~~~Liav~v~D~l-~dgl-----SaVY~ffdP~~~~~SlG~~~iL~~I~~ak~~~~~y~YL  101 (128)
T pfam04377        35 SPLGTRFLEYRLDGKLIAVAVTDIL-PDGL-----SAVYTFYDPDYSKRSLGTYSILWQIELAKELGLPYVYL  101 (128)
T ss_pred             CCCCCEEEEEEECCEEEEEEEEECC-CCCC-----HHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEC
T ss_conf             8988789999828968999998427-7420-----10456537220003631899999999999829973864


No 95 
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=56.21  E-value=15  Score=17.34  Aligned_cols=29  Identities=24%  Similarity=0.384  Sum_probs=15.2

Q ss_pred             CCCCHHHHHHHHHHHHHHH-CCCC--EEEEEE
Q ss_conf             3899589999999999961-3884--799840
Q gi|254781162|r  113 QNKGIGRKLISMSVDAAEK-KGSQ--VIVLVG  141 (192)
Q Consensus       113 rg~GiG~~Li~~~l~~a~~-~g~~--~v~l~g  141 (192)
                      =|-+.|..|+..+++++.. .+..  .+++.|
T Consensus       227 GGG~dG~eLi~~~l~A~~~l~~l~~~~~ivtG  258 (400)
T COG4671         227 GGGADGAELIETALAAAQLLAGLNHKWLIVTG  258 (400)
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEC
T ss_conf             88720599999999875507788743389848


No 96 
>KOG4601 consensus
Probab=55.43  E-value=13  Score=17.59  Aligned_cols=49  Identities=16%  Similarity=0.165  Sum_probs=32.9

Q ss_pred             CEEEEEEEEEE--E--EECC-----CCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             98999999877--6--1188-----223899767885111389958999999999996
Q gi|254781162|r   82 KRIVGSVRMTP--I--SIEK-----ITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAE  130 (192)
Q Consensus        82 ~~IVG~i~~~p--v--~~~~-----~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~  130 (192)
                      +.|.|.+...-  .  ..++     ...+-+-..+|+++.|+.|.|.+|.++.++.-.
T Consensus        81 s~l~GllKVG~KkLfl~D~~~~~ye~e~lcILDFyVheS~QR~G~G~~lfdyMl~kE~  138 (264)
T KOG4601          81 SILKGLLKVGYKKLFLTDNEQNQYEEEALCILDFYVHESEQRSGNGFKLFDYMLKKEN  138 (264)
T ss_pred             HHEEEEEHCCCEEEEEECCHHHHHCCCCCEEEEEEEEHHHHHCCCHHHHHHHHHHHCC
T ss_conf             3031100004215888530766630477447888861466514745899999998528


No 97 
>pfam02388 FemAB FemAB family. The femAB operon codes for two nearly identical approximately 50-kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan. These proteins are also considered as a factor influencing the level of methicillin resistance.
Probab=54.18  E-value=17  Score=16.94  Aligned_cols=71  Identities=20%  Similarity=0.245  Sum_probs=46.1

Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC--------------------HHHHHHCCCEECCCCCEECCC
Q ss_conf             767885111389958999999999996138847998408--------------------657874294874636536689
Q gi|254781162|r  104 GPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGD--------------------IAYYSKLGFQAVPWKSLILPA  163 (192)
Q Consensus       104 gplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~--------------------~~yY~rfGF~~~~~~~l~~p~  163 (192)
                      ||+.   +|...-+-..+++.+.+.|++.++-.+-+--.                    .+.+.++||+... ....+..
T Consensus        70 GP~~---d~~d~~l~~~~l~~Lk~~akk~~a~~lridP~~~~~~~d~~~~~~~~~~~~~~~~l~~~G~~~~g-~~~~~~~  145 (407)
T pfam02388        70 GPVM---DYSNKELVEFFLKELKKYAKKKRALFLKIDPYIPYQLRDLDGEPISAENDALIDKLESLGYKHQG-FTTGFDD  145 (407)
T ss_pred             CCCC---CCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCEECC-CCCCCCC
T ss_conf             9856---88898999999999999999869289997676454430355664675518899999975976037-7678787


Q ss_pred             CCCHHHEEEEECCCC
Q ss_conf             999566698435778
Q gi|254781162|r  164 PVDPNRVLFLPLVQN  178 (192)
Q Consensus       164 pv~~~~~l~l~L~~~  178 (192)
                      .+.|...+++.|++.
T Consensus       146 ~~qpr~~~vldL~~~  160 (407)
T pfam02388       146 TIQPRWQAVLDLEDK  160 (407)
T ss_pred             CCCCCEEEEEECCCC
T ss_conf             667455999878999


No 98 
>PRK12568 glycogen branching enzyme; Provisional
Probab=52.43  E-value=16  Score=17.04  Aligned_cols=48  Identities=13%  Similarity=0.108  Sum_probs=37.1

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEE--ECHHHHHHCCCEECCCCCEECCCCCC
Q ss_conf             9999999999961388479984--08657874294874636536689999
Q gi|254781162|r  119 RKLISMSVDAAEKKGSQVIVLV--GDIAYYSKLGFQAVPWKSLILPAPVD  166 (192)
Q Consensus       119 ~~Li~~~l~~a~~~g~~~v~l~--g~~~yY~rfGF~~~~~~~l~~p~pv~  166 (192)
                      +.|.+..+..+++.|+..|-|.  .+.+||..+||++...+..+.-...|
T Consensus       269 ~ela~~Lipyvk~mGyThIELMPi~EhP~d~SWGYQvtg~fAptSRyGtP  318 (730)
T PRK12568        269 PTLAEQLIPYVQQLGFTHIELLPITEHPFGGSWGYQPLGLYAPTARHGSP  318 (730)
T ss_pred             HHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCH
T ss_conf             99999999999984987799734445688776565565564154678898


No 99 
>TIGR02482 PFKA_ATP 6-phosphofructokinase; InterPro: IPR012828    6-phosphofructokinase (2.7.1.11 from EC) catalyses the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This entry contains bacterial ATP-dependent 6-phosphofructokinases, which lack a beta-hairpin loop present in IPR012829 from INTERPRO family members. IPR012829 from INTERPRO contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. IPR011183 from INTERPRO represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (2.7.1.90 from EC).; GO: 0003872 6-phosphofructokinase activity, 0005524 ATP binding, 0006002 fructose 6-phosphate metabolic process, 0006096 glycolysis.
Probab=52.19  E-value=18  Score=16.77  Aligned_cols=39  Identities=26%  Similarity=0.533  Sum_probs=30.2

Q ss_pred             HHHHHHHHHCCCCEEEEEE-------CHHHHHHCCCEECCCCCEECCCCCC
Q ss_conf             9999999613884799840-------8657874294874636536689999
Q gi|254781162|r  123 SMSVDAAEKKGSQVIVLVG-------DIAYYSKLGFQAVPWKSLILPAPVD  166 (192)
Q Consensus       123 ~~~l~~a~~~g~~~v~l~g-------~~~yY~rfGF~~~~~~~l~~p~pv~  166 (192)
                      +.|.+.+|+.|.+.++++|       +..+|+.+|++.+.     +|+.+|
T Consensus        81 ~kA~~nLK~~GI~~LVViGGDGSy~GA~~L~~~gg~~~iG-----lPGTID  126 (302)
T TIGR02482        81 EKAVENLKKLGIEALVVIGGDGSYTGAQKLYEEGGIPVIG-----LPGTID  126 (302)
T ss_pred             HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEE-----ECCCCC
T ss_conf             9999998874886689986844068899999717984787-----458502


No 100
>TIGR00542 hxl6Piso_put hexulose-6-phosphate isomerase, putative; InterPro: IPR004560 This family shows similarity to other isomerases. Putative identification as hexulose-6-phosphate isomerase has been reported. This family is conserved at better than 40 0dentity among the four known examples from three species: Escherichia coli (SgbU and SgaU), Haemophilus influenzae, and Mycoplasma pneumoniae. The rarity of the family, high level of conservation, and proposed catabolic role suggests lateral transfer may be a part of the evolutionary history of this protein.; GO: 0016861 intramolecular oxidoreductase activity interconverting aldoses and ketoses, 0005975 carbohydrate metabolic process.
Probab=51.73  E-value=15  Score=17.32  Aligned_cols=37  Identities=22%  Similarity=0.385  Sum_probs=31.9

Q ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHCCCEE
Q ss_conf             5899999999999613884799840865787429487
Q gi|254781162|r  117 IGRKLISMSVDAAEKKGSQVIVLVGDIAYYSKLGFQA  153 (192)
Q Consensus       117 iG~~Li~~~l~~a~~~g~~~v~l~g~~~yY~rfGF~~  153 (192)
                      -|...|++|+..|+..|...|-|-|..=||+..-=+.
T Consensus        91 ~~~eIm~KAi~La~~lGIR~IQLAgYDVYYe~~d~eT  127 (290)
T TIGR00542        91 QGLEIMEKAIQLARDLGIRIIQLAGYDVYYEEHDEET  127 (290)
T ss_pred             HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHH
T ss_conf             9999999999999757960662233300335576045


No 101
>PRK05402 glycogen branching enzyme; Provisional
Probab=48.83  E-value=21  Score=16.44  Aligned_cols=46  Identities=13%  Similarity=0.176  Sum_probs=36.6

Q ss_pred             HHHHHHHHHHHHHHCCCCEEEEE--ECHHHHHHCCCEECCCCCEECCC
Q ss_conf             89999999999961388479984--08657874294874636536689
Q gi|254781162|r  118 GRKLISMSVDAAEKKGSQVIVLV--GDIAYYSKLGFQAVPWKSLILPA  163 (192)
Q Consensus       118 G~~Li~~~l~~a~~~g~~~v~l~--g~~~yY~rfGF~~~~~~~l~~p~  163 (192)
                      =+.|.+..+..+++.|+..|-|.  ...+||..+||++...+..+.-.
T Consensus       269 Y~ela~~Lipyvk~mGythIElMPv~EhP~d~SWGYQ~tgyfAptSRy  316 (730)
T PRK05402        269 YRELADQLIPYVKEMGFTHVELLPVAEHPFDGSWGYQPTGYYAPTSRF  316 (730)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             999999999999973987799644304788887666655401563246


No 102
>cd03173 DUF619-like DUF619-like: This CD includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain seen in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This CD also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK). The nuclear-encoded  mitochondrial polyprotein precursor (ARG5,6) consists of an N-terminal NAGK (ArgB) domain, a central DUF619 domain, and a C-ter
Probab=47.52  E-value=22  Score=16.31  Aligned_cols=49  Identities=14%  Similarity=0.086  Sum_probs=33.1

Q ss_pred             EEECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHH
Q ss_conf             998898999999877611882238997678851113899589999999999
Q gi|254781162|r   78 CAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDA  128 (192)
Q Consensus        78 A~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~  128 (192)
                      +..++...|.+-.++-..  ....-|.-++|.++.||.|+|..+..+..+.
T Consensus        14 ~y~~~~y~g~AIvt~~~~--~~~~yLdKFavs~~~~g~gv~d~v~~~l~~d   62 (99)
T cd03173          14 AYVDEPYEGLAIVTPEGN--GGTAYLDKFAVSSSGWGNGVGDNIFEALRKD   62 (99)
T ss_pred             EEEECCCCEEEEEECCCC--CCCEEEEEEEECHHHHCCCHHHHHHHHHHHH
T ss_conf             999489758999944899--9965777799963454049899999999854


No 103
>COG3623 SgaU Putative L-xylulose-5-phosphate 3-epimerase [Carbohydrate transport and metabolism]
Probab=46.19  E-value=16  Score=17.04  Aligned_cols=33  Identities=21%  Similarity=0.394  Sum_probs=27.0

Q ss_pred             HHHHHHHHHHHHHHCCCCEEEEEECHHHHHHCC
Q ss_conf             899999999999613884799840865787429
Q gi|254781162|r  118 GRKLISMSVDAAEKKGSQVIVLVGDIAYYSKLG  150 (192)
Q Consensus       118 G~~Li~~~l~~a~~~g~~~v~l~g~~~yY~rfG  150 (192)
                      +-.+|+.++..|+..|...+-|-|..-||+.-.
T Consensus        94 aleiM~KaI~LA~dLGIRtIQLAGYDVYYE~~d  126 (287)
T COG3623          94 ALEIMEKAIQLAQDLGIRTIQLAGYDVYYEEAD  126 (287)
T ss_pred             HHHHHHHHHHHHHHHCCEEEEECCCEEEECCCC
T ss_conf             999999999999970842676324234414688


No 104
>TIGR02089 TTC tartrate dehydrogenase; InterPro: IPR011829    Tartrate dehydrogenase catalyzes the oxidation of both meso- and (+)-tartrate as well as a D-malate . These enzymes are closely related to the 3-isopropylmalate and isohomocitrate dehydrogenases found in IPR004429 from INTERPRO and IPR011828 from INTERPRO, respectively.; GO: 0009027 tartrate dehydrogenase activity, 0051287 NAD binding.
Probab=45.50  E-value=23  Score=16.13  Aligned_cols=14  Identities=21%  Similarity=0.741  Sum_probs=5.9

Q ss_pred             CCCHHHHHHHHHHH
Q ss_conf             89958999999999
Q gi|254781162|r  114 NKGIGRKLISMSVD  127 (192)
Q Consensus       114 g~GiG~~Li~~~l~  127 (192)
                      |-|||+..|.++++
T Consensus        11 GDGIG~eV~~aa~~   24 (355)
T TIGR02089        11 GDGIGKEVVAAALQ   24 (355)
T ss_pred             CCCCCHHHHHHHHH
T ss_conf             88986537999999


No 105
>TIGR00455 apsK adenylylsulfate kinase; InterPro: IPR002891 Enzyme that catalyses the phosphorylation of adenylylsulphate to 3'-phosphoadenylylsulphate. This domain contains an ATP binding P-loop motif .; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity transferring phosphorus-containing groups, 0000103 sulfate assimilation.
Probab=42.81  E-value=24  Score=16.11  Aligned_cols=39  Identities=38%  Similarity=0.581  Sum_probs=31.5

Q ss_pred             CHHHHHHHHHHHH-HHHCCCCEEEEEEC---HHHHHHCCCEEC
Q ss_conf             9589999999999-96138847998408---657874294874
Q gi|254781162|r  116 GIGRKLISMSVDA-AEKKGSQVIVLVGD---IAYYSKLGFQAV  154 (192)
Q Consensus       116 GiG~~Li~~~l~~-a~~~g~~~v~l~g~---~~yY~rfGF~~~  154 (192)
                      |=|+--+..|+++ +.++|+...+|-||   ..+|.-+||...
T Consensus        29 GsGKsTiA~Al~~~L~~~G~~~~~LDGDnvR~gL~~dLGFS~~   71 (187)
T TIGR00455        29 GSGKSTIANALEKKLEKKGYRVYVLDGDNVRHGLNKDLGFSEE   71 (187)
T ss_pred             CCHHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCHH
T ss_conf             5635799999999999669749997586342477888888856


No 106
>TIGR02362 dhaK1b probable dihydroxyacetone kinase DhaK1b subunit; InterPro: IPR012735    Two types of dihydroxyacetone kinase (glycerone kinase) are described. In yeast and a few bacteria, e.g. Citrobacter freundii, the enzyme is a single chain that uses ATP as phosphoryl donor and is designated 2.7.1.29 from EC. By contract, Escherichia coli and many other bacterial species have a multisubunit form with a phosphoprotein donor related to PTS transport proteins. This family represents a protein, unique to the firmicutes (low GC Gram-positives), that appears to be a divergent second copy of the K subunit of that complex; its gene is always found in operons with the other three proteins of the complex..
Probab=40.74  E-value=21  Score=16.45  Aligned_cols=47  Identities=26%  Similarity=0.397  Sum_probs=33.0

Q ss_pred             EEECCCC----CCCCH-HHHHHHHHHHHHHHCCCCEEEEE--EC--HHHHHHCCCE
Q ss_conf             7885111----38995-89999999999961388479984--08--6578742948
Q gi|254781162|r  106 IVVHPLY----QNKGI-GRKLISMSVDAAEKKGSQVIVLV--GD--IAYYSKLGFQ  152 (192)
Q Consensus       106 laV~P~~----rg~Gi-G~~Li~~~l~~a~~~g~~~v~l~--g~--~~yY~rfGF~  152 (192)
                      ++|.++-    |+||+ |+-|+.+.|-+|.+.|+..--|.  |.  ..--.-.||-
T Consensus       134 iSVe~~~~f~~R~RGvAGtvLvHKIlGaAA~~GaSL~~L~~la~~l~~~~aTlGvA  189 (328)
T TIGR02362       134 ISVESESSFKKRRRGVAGTVLVHKILGAAAKEGASLDELEHLAAALVTNIATLGVA  189 (328)
T ss_pred             CCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             33176455633035632577998999998523766789999999986336767667


No 107
>COG2921 Uncharacterized conserved protein [Function unknown]
Probab=37.76  E-value=31  Score=15.41  Aligned_cols=43  Identities=9%  Similarity=0.155  Sum_probs=34.7

Q ss_pred             HHHHCCCCCEEEEEEECCCH-HHHCCEEEEEECCHHHHHHHHHH
Q ss_conf             43110343224676421503-32012034420798999999998
Q gi|254781162|r    8 LRKFLSIAFFEFICWRRSRW-QKIGAFFLERLEHDSSICAMHAD   50 (192)
Q Consensus         8 ~~~~~~~~~~~~~~~r~~~~-~~~~~~~~~R~e~~~di~ai~~~   50 (192)
                      ++++.+.+..+=+.||.|.+ .-.+.-+.||+++-..+++++..
T Consensus        36 vqr~ap~~~~~~~~~k~SSkGnY~svsI~i~A~~~EQ~e~ly~e   79 (90)
T COG2921          36 VQRHAPGDYTPRVSWKPSSKGNYLSVSITIRATNIEQVEALYRE   79 (90)
T ss_pred             HHHHCCCCCCCEEEECCCCCCCEEEEEEEEEECCHHHHHHHHHH
T ss_conf             99878765576056314889846889999997778999999999


No 108
>PRK12313 glycogen branching enzyme; Provisional
Probab=36.81  E-value=32  Score=15.32  Aligned_cols=44  Identities=11%  Similarity=0.139  Sum_probs=34.1

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEE--CHHHHHHCCCEECCCCCEECC
Q ss_conf             99999999999613884799840--865787429487463653668
Q gi|254781162|r  119 RKLISMSVDAAEKKGSQVIVLVG--DIAYYSKLGFQAVPWKSLILP  162 (192)
Q Consensus       119 ~~Li~~~l~~a~~~g~~~v~l~g--~~~yY~rfGF~~~~~~~l~~p  162 (192)
                      +.+.+..+..+++.|+..|-|..  +.++|..+||.+...+....-
T Consensus       169 ~e~a~~l~~yl~~lG~t~velmpv~e~p~~~swGY~~~~~fa~~sr  214 (632)
T PRK12313        169 RELADELIPYVKEMGYTHVEFMPLMEHPLDGSWGYQLTGYFAPTSR  214 (632)
T ss_pred             HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEECCCCCC
T ss_conf             9999999999998198779982044568988756666500146567


No 109
>cd04266 DUF619-NAGS-FABP DUF619-NAGS-FABP: DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain, yet to be characterized, is predicted to function in NAG synthase association in fungi.
Probab=36.13  E-value=33  Score=15.25  Aligned_cols=55  Identities=18%  Similarity=0.092  Sum_probs=33.9

Q ss_pred             EEEEEEECCEEEEEEEEEEEEEC--CCCEEEEEEEEECCCCCC-CCHHHHHHHHHHHH
Q ss_conf             78999988989999998776118--822389976788511138-99589999999999
Q gi|254781162|r   74 LSFLCAEGKRIVGSVRMTPISIE--KITGHLLGPIVVHPLYQN-KGIGRKLISMSVDA  128 (192)
Q Consensus        74 lslVA~~~~~IVG~i~~~pv~~~--~~~~~~LgplaV~P~~rg-~GiG~~Li~~~l~~  128 (192)
                      |..|...++---+.|..+....+  .....-|-..||.|+.|| .|+|..|.....+.
T Consensus        11 la~iii~gdY~g~AIlT~E~~~~~~~~~vpYLDKFAV~~~aqG~~Gl~d~iw~~m~~~   68 (108)
T cd04266          11 LATVIIAGDYEGAAILTWEGPDGSTPEKIAYLDKFAVLPKAQGSDGIADILFNAMLDE   68 (108)
T ss_pred             EEEEEEECCCEEEEEEEECCCCCCCCCCCCEEEEEEECHHHCCCCCHHHHHHHHHHHH
T ss_conf             2489995574058999844789888886505520454322248632899999999986


No 110
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490; InterPro: IPR006385   This group of sequences belong to the IB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences are all bacterial. The IB subfamily includes the enzyme phosphoserine phosphatase. Due to this relationship, several of these sequences have been annotated as "phosphoserine phosphatase related proteins," or "phosphoserine phosphatase-family enzymes." There is presently no evidence that any of the proteins in this family possess PSPase activity. .
Probab=35.30  E-value=34  Score=15.17  Aligned_cols=35  Identities=14%  Similarity=0.258  Sum_probs=27.1

Q ss_pred             HHHHHHHHHHCCCCEEEEEECH-----HHHHHCCCEECCC
Q ss_conf             9999999961388479984086-----5787429487463
Q gi|254781162|r  122 ISMSVDAAEKKGSQVIVLVGDI-----AYYSKLGFQAVPW  156 (192)
Q Consensus       122 i~~~l~~a~~~g~~~v~l~g~~-----~yY~rfGF~~~~~  156 (192)
                      +...+++-+++|+..+++.+.+     ++++++||..+-.
T Consensus        94 a~~~~~~H~~~G~~~vlvSaS~~~~v~~~A~~~G~~~~~g  133 (204)
T TIGR01490        94 ARDLIKAHKAEGHTIVLVSASLEILVKPLARKLGIDNAIG  133 (204)
T ss_pred             HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCEEEE
T ss_conf             9999999998089389981678899999998718660301


No 111
>PRK09936 hypothetical protein; Provisional
Probab=34.74  E-value=35  Score=15.12  Aligned_cols=33  Identities=24%  Similarity=0.391  Sum_probs=20.9

Q ss_pred             HHHHHHHHHHHHHHCCCCEEE-EEECHHHHHHCC
Q ss_conf             899999999999613884799-840865787429
Q gi|254781162|r  118 GRKLISMSVDAAEKKGSQVIV-LVGDIAYYSKLG  150 (192)
Q Consensus       118 G~~Li~~~l~~a~~~g~~~v~-l~g~~~yY~rfG  150 (192)
                      -+..+.+.++.|+.+|...++ |..||+||.+.-
T Consensus        70 ~~gwLa~~l~~A~~aGl~lvlGLyaDP~yf~~~~  103 (294)
T PRK09936         70 QRGWLFKRLAAAQQAGLKLVVGLYADPEYFMHQK  103 (294)
T ss_pred             HHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH
T ss_conf             2039999999998669628886315858865656


No 112
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=33.83  E-value=15  Score=17.34  Aligned_cols=42  Identities=12%  Similarity=0.154  Sum_probs=16.8

Q ss_pred             EEEEECCC-CCCCCHHHHHHHHHHHHHHHCC--CCEEEEEECHHH
Q ss_conf             76788511-1389958999999999996138--847998408657
Q gi|254781162|r  104 GPIVVHPL-YQNKGIGRKLISMSVDAAEKKG--SQVIVLVGDIAY  145 (192)
Q Consensus       104 gplaV~P~-~rg~GiG~~Li~~~l~~a~~~g--~~~v~l~g~~~y  145 (192)
                      -|+.|.|+ +...||-..-....++.+.+.+  ...++++.+|+|
T Consensus       124 ~~~~v~~~~~~~~~I~~~~~~~~Iee~~~e~gk~~aL~llt~pdy  168 (386)
T PRK09331        124 NVREVPKTGYPDYRITPEAYAEKIEEVEDETGKPPALALLTHVDG  168 (386)
T ss_pred             EEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf             589936877723450800579999999986189855999968886


No 113
>PRK13210 putative L-xylulose 5-phosphate 3-epimerase; Reviewed
Probab=32.83  E-value=20  Score=16.58  Aligned_cols=32  Identities=16%  Similarity=0.346  Sum_probs=22.2

Q ss_pred             ECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf             8511138995899999999999613884799840
Q gi|254781162|r  108 VHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVG  141 (192)
Q Consensus       108 V~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g  141 (192)
                      .+|+.|.+++  .+|+.+++.|...|...+.+.|
T Consensus        84 ~d~~~r~~~l--e~l~kaI~lA~~LGi~~I~l~g  115 (284)
T PRK13210         84 RDEATRERAL--EIMKKAIRLAQDLGIRTIQLAG  115 (284)
T ss_pred             CCHHHHHHHH--HHHHHHHHHHHHCCCCEEEECC
T ss_conf             8989999999--9999999999980997899688


No 114
>pfam06559 DCD 2'-deoxycytidine 5'-triphosphate deaminase (DCD). This family consists of several bacterial 2'-deoxycytidine 5'-triphosphate deaminase proteins (EC:3.5.4.13).
Probab=32.14  E-value=38  Score=14.87  Aligned_cols=51  Identities=25%  Similarity=0.369  Sum_probs=26.7

Q ss_pred             CCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCH
Q ss_conf             100131103888876078999988989999998776118822389976788511138995
Q gi|254781162|r   58 VRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGI  117 (192)
Q Consensus        58 ~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~Gi  117 (192)
                      +++..-.|-+..|     |+ .++|++||-+.|-++.......|  | -.+...||+||+
T Consensus       308 sraVLEVRs~evP-----F~-ledgQ~v~rL~yE~m~~~P~~lY--G-~~i~SNYq~QgL  358 (366)
T pfam06559       308 SRAVLEVRSHEVP-----FI-LEHGQIVGRLVYERMAARPATLY--G-AGLGSNYQGQGL  358 (366)
T ss_pred             CCEEEEEECCCCC-----EE-EECCCEEEEEEEEECCCCCHHHC--C-CCCCCCCCCCCC
T ss_conf             4079998348787-----67-66797889999877004861210--7-876654212376


No 115
>PRK07559 2'-deoxycytidine 5'-triphosphate deaminase; Provisional
Probab=31.77  E-value=39  Score=14.83  Aligned_cols=36  Identities=19%  Similarity=0.124  Sum_probs=20.3

Q ss_pred             EECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCH
Q ss_conf             988989999998776118822389976788511138995
Q gi|254781162|r   79 AEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGI  117 (192)
Q Consensus        79 ~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~Gi  117 (192)
                      .++|++||-+.|-++.......|+   -.+...||+||+
T Consensus       323 le~gQ~v~rl~ye~m~~~p~~lYG---~~i~SnYq~QgL  358 (366)
T PRK07559        323 LEHGQIVGRLVYERMLERPDALYG---AGIGSNYQAQGL  358 (366)
T ss_pred             EECCCEEEEEEEEECCCCCCCCCC---CCCCCCCHHCCC
T ss_conf             768978899998870148711116---775754110266


No 116
>TIGR02277 PaaX_trns_reg phenylacetic acid degradation operon negative regulatory protein PaaX; InterPro: IPR011965    This transcriptional regulator is always found in association with operons believed to be involved in the degradation of phenylacetic acid . The gene product has been shown to bind to the promoter sites and repress their transcription ..
Probab=31.11  E-value=29  Score=15.62  Aligned_cols=73  Identities=22%  Similarity=0.307  Sum_probs=47.6

Q ss_pred             EEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECHHHHH-----HCCCEECCCCCEECCCCCCHHHEEEEE
Q ss_conf             389976788511138995899999999999613884799840865787-----429487463653668999956669843
Q gi|254781162|r  100 GHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGDIAYYS-----KLGFQAVPWKSLILPAPVDPNRVLFLP  174 (192)
Q Consensus       100 ~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~~~yY~-----rfGF~~~~~~~l~~p~pv~~~~~l~l~  174 (192)
                      ...||.|.  .=.++-||+.++++.++.++.++|+-..-=.|.-.||.     +--|..+...=...|.+--...+.-+-
T Consensus        17 ~IWlG~Li--~~l~~~Gi~E~~VRTAvsRL~a~GWL~~Er~GRrSfY~L~D~G~~~~~~A~~~IY~~p~~~W~g~W~Ll~   94 (287)
T TIGR02277        17 AIWLGSLI--ELLEGLGINERLVRTAVSRLVAQGWLQSERKGRRSFYRLSDKGRREFAAAARRIYDPPAPAWDGKWELLL   94 (287)
T ss_pred             EEEHHHHH--HHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
T ss_conf             03376699--9962258883379999999865100010245441457788999999999987405788867041156655


No 117
>PRK13876 conjugal transfer coupling protein TraG; Provisional
Probab=30.92  E-value=39  Score=14.84  Aligned_cols=12  Identities=33%  Similarity=0.664  Sum_probs=5.1

Q ss_pred             EECCCCCCCCHH
Q ss_conf             885111389958
Q gi|254781162|r  107 VVHPLYQNKGIG  118 (192)
Q Consensus       107 aV~P~~rg~GiG  118 (192)
                      .+.|+-.|||+|
T Consensus       149 ~~APTRSGKGVG  160 (662)
T PRK13876        149 CFAPTRSGKGVG  160 (662)
T ss_pred             EECCCCCCCEEE
T ss_conf             975799987015


No 118
>cd04265 DUF619-NAGS-U DUF619-NAGS-U: This CD includes the DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle found in humans and fish, as well as the DUF619 domain present C-terminal of a NAG kinase-like domain seen in a limited number of bacterial and Dictyostelium predicted NAGSs. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain is yet to be characterized.
Probab=29.03  E-value=44  Score=14.55  Aligned_cols=30  Identities=23%  Similarity=0.262  Sum_probs=25.2

Q ss_pred             EEEEEEEEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf             389976788511138995899999999999
Q gi|254781162|r  100 GHLLGPIVVHPLYQNKGIGRKLISMSVDAA  129 (192)
Q Consensus       100 ~~~LgplaV~P~~rg~GiG~~Li~~~l~~a  129 (192)
                      ..-|-..+|.++.||.|+|..+..+..+.-
T Consensus        30 vpyLDKFaV~~~a~G~gv~d~vw~~m~~d~   59 (95)
T cd04265          30 TPYLDKFAVSSSAQGEGLGRALWRCLREDF   59 (95)
T ss_pred             CEEEEEEEECCCCCCCCHHHHHHHHHHHHC
T ss_conf             878865788652102487999999998558


No 119
>COG2243 CobF Precorrin-2 methylase [Coenzyme metabolism]
Probab=27.76  E-value=46  Score=14.42  Aligned_cols=21  Identities=24%  Similarity=0.558  Sum_probs=14.1

Q ss_pred             CC-CCEEEEEECHHHHHHCCCE
Q ss_conf             38-8479984086578742948
Q gi|254781162|r  132 KG-SQVIVLVGDIAYYSKLGFQ  152 (192)
Q Consensus       132 ~g-~~~v~l~g~~~yY~rfGF~  152 (192)
                      .| -.+.+.+|||.||..|++-
T Consensus        89 ~G~~VAf~~lGDP~~YsTf~~l  110 (234)
T COG2243          89 AGRDVAFLTLGDPTFYSTFMYL  110 (234)
T ss_pred             CCCEEEEEECCCCCHHHHHHHH
T ss_conf             6992899981485288879999


No 120
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain.  MDH is part of a widespread family of homologous FMN-dependent a-hydroxy acid oxidizing enzymes that oxidizes (S)-mandelate to phenylglyoxalate. MDH is an enzyme in the mandelate pathway that occurs in several strains of Pseudomonas which converts (R)-mandelate to benzoate. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).
Probab=26.99  E-value=47  Score=14.34  Aligned_cols=28  Identities=29%  Similarity=0.350  Sum_probs=22.5

Q ss_pred             HHHHHHHHHHHHCCCCEEEEEECHHHHH
Q ss_conf             9999999999613884799840865787
Q gi|254781162|r  120 KLISMSVDAAEKKGSQVIVLVGDIAYYS  147 (192)
Q Consensus       120 ~Li~~~l~~a~~~g~~~v~l~g~~~yY~  147 (192)
                      .+.+..+++|++.|+..++|.-|.+.+.
T Consensus       128 ~~~~~li~RA~~aG~~alvlTvD~pv~G  155 (361)
T cd04736         128 ELAELLVKRALAAGYTTLVLTTDVAVNG  155 (361)
T ss_pred             HHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf             9999999999985998689950788878


No 121
>PRK05576 cobalt-precorrin-2 C(20)-methyltransferase; Validated
Probab=26.52  E-value=48  Score=14.31  Aligned_cols=11  Identities=36%  Similarity=0.597  Sum_probs=4.5

Q ss_pred             ECHHHHHHCCC
Q ss_conf             08657874294
Q gi|254781162|r  141 GDIAYYSKLGF  151 (192)
Q Consensus       141 g~~~yY~rfGF  151 (192)
                      |||.+|.++++
T Consensus        99 GDP~iyst~~~  109 (224)
T PRK05576         99 GDPNVYSTFSH  109 (224)
T ss_pred             CCCCHHCHHHH
T ss_conf             89621120999


No 122
>pfam04765 DUF616 Protein of unknown function (DUF616). Family of uncharacterized proteins.
Probab=25.42  E-value=38  Score=14.91  Aligned_cols=57  Identities=14%  Similarity=0.123  Sum_probs=37.6

Q ss_pred             HHHHHHHHHHHCCCCEEEEEECHHHHHHCCCEECCCCCEECCCCCCHHHEEEEECCC
Q ss_conf             999999999613884799840865787429487463653668999956669843577
Q gi|254781162|r  121 LISMSVDAAEKKGSQVIVLVGDIAYYSKLGFQAVPWKSLILPAPVDPNRVLFLPLVQ  177 (192)
Q Consensus       121 Li~~~l~~a~~~g~~~v~l~g~~~yY~rfGF~~~~~~~l~~p~pv~~~~~l~l~L~~  177 (192)
                      .++++.+-.+...+.--.+--..++|.+-|-.+-....+.+|.+||+..+.+.+.++
T Consensus       196 v~eEa~a~kr~~Ky~~~~id~Q~e~Y~~~GL~~~s~~k~pl~SdVPEg~vIvReHtp  252 (306)
T pfam04765       196 VYEEAEANKRLKKYNHESIDEQMEFYRSDGLTPWSDPKLPLPSDVPEGSVIVREHTP  252 (306)
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCC
T ss_conf             899999999876507589999999998659997766666776889863178640662


No 123
>cd02922 FCB2_FMN Flavocytochrome b2 (FCB2) FMN-binding domain.  FCB2 (AKA L-lactate:cytochrome c oxidoreductase) is a respiratory enzyme located in the intermembrane space of fungal mitochondria which catalyzes the oxidation of L-lactate to pyruvate. FCB2 also participates in a short electron-transport chain involving cytochrome c and cytochrome oxidase which ultimately directs the reducing equivalents gained from L-lactate oxidation to oxygen, yielding one molecule of ATP for every L-lactate molecule consumed. FCB2  is composed of 2 domains: a C-terminal flavin-binding domain, which includes the active site for lacate oxidation, and an N-terminal b2-cytochrome domain, required for efficient cytochrome c reduction. FCB2 is a homotetramer and contains two noncovalently bound cofactors, FMN and heme per subunit.
Probab=24.83  E-value=52  Score=14.10  Aligned_cols=38  Identities=24%  Similarity=0.216  Sum_probs=28.8

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEECHHHH------HHCCCEECCC
Q ss_conf             9999999999961388479984086578------7429487463
Q gi|254781162|r  119 RKLISMSVDAAEKKGSQVIVLVGDIAYY------SKLGFQAVPW  156 (192)
Q Consensus       119 ~~Li~~~l~~a~~~g~~~v~l~g~~~yY------~rfGF~~~~~  156 (192)
                      +.+++..+++|++.|+..+++.-|.+.+      .|.||...+.
T Consensus       130 r~~~~~li~RA~~aG~~alvlTvD~p~~G~R~rd~r~~~~~~~~  173 (344)
T cd02922         130 RTKTEELLKRAEKLGAKAIFLTVDAPVLGKRERDERLKAEEAVS  173 (344)
T ss_pred             HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHCCCCCCCC
T ss_conf             79999999999986998899956788877522666507777887


No 124
>pfam09924 DUF2156 Uncharacterized conserved protein (DUF2156). This domain, found in various hypothetical prokaryotic proteins, has no known function.
Probab=23.31  E-value=56  Score=13.92  Aligned_cols=55  Identities=15%  Similarity=0.060  Sum_probs=38.1

Q ss_pred             EEEEEECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             8999988989999998776118822389976788511138995899999999999613
Q gi|254781162|r   75 SFLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKK  132 (192)
Q Consensus        75 slVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~  132 (192)
                      .+++..+|+|+|.+.+.|+.  +.+++.+--+=-+|+. -+|+-..|+.++++-+++.
T Consensus       181 ~~~~~~~g~i~aF~~~~p~~--~~~~~~idl~r~~~da-~~G~~~~l~~~~~~gLr~~  235 (250)
T pfam09924       181 GAVVRVDGKIVAFASGEPLN--GRDTLSLDLMRRDPDA-PNGIMEFLNAELAEGLRRF  235 (250)
T ss_pred             EEEEEECCEEEEEEEEEEEC--CCCEEEEEEEECCCCC-CCCHHHHHHHHHHHHHHHC
T ss_conf             89999999999999999957--9997999998659999-8869999999999999974


No 125
>pfam02457 DisA_N DisA bacterial checkpoint controller nucleotide-binding. The DisA protein is a bacterial checkpoint protein that dimerizes into an octameric complex. The protein consists of three distinct domains. This domain is the first and is a globular, nucleotide-binding region; the next 146-289 residues constitute the DisA-linker family, pfam10635, that consists of an elongated bundle of three alpha helices (alpha-6, alpha-10, and alpha-11), one side of which carries an additional three helices (alpha7-9), which thus forms a spine like-linker between domains 1 and 3. The C-terminal residues, of domain 3, are represented by family HHH, pfam00633, the specific DNA-binding domain. The octameric complex thus has structurally linked nucleotide-binding and DNA-binding HhH domains and the nucleotide-binding domains are bound to a cyclic di-adenosine phosphate such that DisA is a specific di-adenylate cyclase. The di-adenylate cyclase activity is strongly suppressed by binding to branch
Probab=22.84  E-value=50  Score=14.22  Aligned_cols=48  Identities=27%  Similarity=0.416  Sum_probs=22.3

Q ss_pred             EEEEECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             9999889899999987761188223899767885111389958999999999996138847998
Q gi|254781162|r   76 FLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVL  139 (192)
Q Consensus        76 lVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l  139 (192)
                      +|- .+++|+..-.+-|+..             .+. ..+++|++= ++++...++-+...+++
T Consensus        59 vII-~~~~i~aa~~~lpls~-------------~~~-l~~~~GtRH-RAA~gise~TdaivivV  106 (122)
T pfam02457        59 VII-RGGRIVAAGCYLPLSP-------------DPS-IPKELGTRH-RAALGISEQTDALVIVV  106 (122)
T ss_pred             EEE-ECCCEEEEEEEEECCC-------------CCC-CCCCCCHHH-HHHHHHHHHCCCEEEEE
T ss_conf             999-8993799999997487-------------777-772115567-88879887519889999


No 126
>COG0434 SgcQ Predicted TIM-barrel enzyme [General function prediction only]
Probab=22.68  E-value=46  Score=14.42  Aligned_cols=19  Identities=21%  Similarity=0.608  Sum_probs=7.3

Q ss_pred             CCCEEEE--EECHHHHHHCCC
Q ss_conf             8847998--408657874294
Q gi|254781162|r  133 GSQVIVL--VGDIAYYSKLGF  151 (192)
Q Consensus       133 g~~~v~l--~g~~~yY~rfGF  151 (192)
                      |++++++  +||.+||+..|+
T Consensus        47 G~DavivEN~gD~Pf~k~v~~   67 (263)
T COG0434          47 GVDAVIVENYGDAPFLKDVGP   67 (263)
T ss_pred             CCCEEEEECCCCCCCCCCCCH
T ss_conf             976899713578877777974


No 127
>pfam09837 DUF2064 Uncharacterized protein conserved in bacteria (DUF2064). This domain, found in various prokaryotic proteins, has no known function.
Probab=22.04  E-value=59  Score=13.77  Aligned_cols=71  Identities=21%  Similarity=0.311  Sum_probs=41.8

Q ss_pred             EEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEC--H---HHHHHCCCEECCCCCEECCCCCCHHHEEEEECC
Q ss_conf             9767885111389958999999999996138847998408--6---578742948746365366899995666984357
Q gi|254781162|r  103 LGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLVGD--I---AYYSKLGFQAVPWKSLILPAPVDPNRVLFLPLV  176 (192)
Q Consensus       103 LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~--~---~yY~rfGF~~~~~~~l~~p~pv~~~~~l~l~L~  176 (192)
                      .+.+.+. .-++..+|.+|- ++++.+-++|+..++++|.  |   +.|=.--|+......+++- |..+-.+-.+-+.
T Consensus        32 ~~~~~~~-~Q~~gdLG~Rm~-~a~~~~~~~g~~~v~lIGsD~P~l~~~~l~~A~~~L~~~d~Vlg-Pa~DGGy~LiG~~  107 (121)
T pfam09837        32 LGGVTVI-PQGGGDLGERMA-RAFRQAFAAGYRPVLLIGTDCPDLTAELLAQAFEALERHDAVLG-PAEDGGYYLLGLR  107 (121)
T ss_pred             CCCCEEE-ECCCCCHHHHHH-HHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCEEEE-ECCCCCEEEEEEC
T ss_conf             7996688-259999899999-99999984389858998488465899999999998621997999-7488999999747


No 128
>pfam06849 DUF1246 Protein of unknown function (DUF1246). This family represents the N-terminus of a number of hypothetical archaeal proteins of unknown function.
Probab=21.99  E-value=59  Score=13.77  Aligned_cols=29  Identities=21%  Similarity=0.510  Sum_probs=21.2

Q ss_pred             HHHHHHHHCCCCEEEEE--ECHHHHHHCCCE
Q ss_conf             99999961388479984--086578742948
Q gi|254781162|r  124 MSVDAAEKKGSQVIVLV--GDIAYYSKLGFQ  152 (192)
Q Consensus       124 ~~l~~a~~~g~~~v~l~--g~~~yY~rfGF~  152 (192)
                      +.++-|+..|...+.+.  |...+|.+|+|.
T Consensus        11 qIl~GAK~EGF~Tv~vc~~gr~~~Y~~f~~~   41 (124)
T pfam06849        11 QILDGAKDEGFRTVAVCQKGREKFYRRFPFV   41 (124)
T ss_pred             HHHHHHHHCCCCEEEEEECCCCCHHHHCCCC
T ss_conf             9972388739957899817975213326867


No 129
>TIGR02665 molyb_mobA molybdopterin-guanine dinucleotide biosynthesis protein A; InterPro: IPR013482    In many molybdopterin-containing enzymes, including nitrate reductase and dimethylsulphoxide reductase, the cofactor is molybdopterin-guanine dinucleotide. This entry describes proteobacterial MobA (molybdopterin-guanine dinucleotide biosynthesis protein A). MobA synthesises molybdopterin-guanine dinucleotide from molybdopterin and GTP. ; GO: 0003824 catalytic activity, 0006777 Mo-molybdopterin cofactor biosynthetic process.
Probab=21.14  E-value=51  Score=14.15  Aligned_cols=47  Identities=23%  Similarity=0.374  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHHHHHCCCCEEE-EEECHHHHHHCCC--EECCCC---CEECCCC
Q ss_conf             899999999999613884799-8408657874294--874636---5366899
Q gi|254781162|r  118 GRKLISMSVDAAEKKGSQVIV-LVGDIAYYSKLGF--QAVPWK---SLILPAP  164 (192)
Q Consensus       118 G~~Li~~~l~~a~~~g~~~v~-l~g~~~yY~rfGF--~~~~~~---~l~~p~p  164 (192)
                      |+-|++|++++.+=|-...++ .=++++=|+-+||  ..++..   .-..+||
T Consensus        26 g~PL~~hv~~rL~PQv~~~~IsANRn~~~Y~~~g~Gl~V~~D~~DA~~~F~GP   78 (202)
T TIGR02665        26 GKPLIEHVLARLRPQVSDLAISANRNPERYAQAGFGLPVVPDDVDALADFPGP   78 (202)
T ss_pred             CCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHCCCCEECCCCCCCCCCCCCC
T ss_conf             65289999998435076667413889778988608973127853435788887


No 130
>TIGR02708 L_lactate_ox L-lactate oxidase; InterPro: IPR014080   Members of this entry oxidize L-lactate to pyruvate, reducing molecular oxygen to hydrogen peroxide. The enzyme is known in Aerococcus viridans, Streptococcus iniae, and some strains of Streptococcus pyogenes where it appears to contribute to virulence..
Probab=20.82  E-value=63  Score=13.62  Aligned_cols=45  Identities=18%  Similarity=0.283  Sum_probs=27.3

Q ss_pred             HHHHHHHHHCCCCEEEEEECHHHHHHCCCEECCCCCEECC--CCCCHHH
Q ss_conf             9999999613884799840865787429487463653668--9999566
Q gi|254781162|r  123 SMSVDAAEKKGSQVIVLVGDIAYYSKLGFQAVPWKSLILP--APVDPNR  169 (192)
Q Consensus       123 ~~~l~~a~~~g~~~v~l~g~~~yY~rfGF~~~~~~~l~~p--~pv~~~~  169 (192)
                      ++.++++|..|+.+|+|+.|...=+..--  ..++++++|  .|+-.+|
T Consensus       149 R~I~D~~Ka~G~~AIvLTADaTV~GNR~~--D~~N~FVfP~GMPIV~~Y  195 (368)
T TIGR02708       149 RDILDRVKADGAKAIVLTADATVGGNREV--DKRNGFVFPVGMPIVQEY  195 (368)
T ss_pred             HHHHHHHHHCCCEEEEEECCCCCCCCCCC--CCCCCEEECCCCCHHHHC
T ss_conf             46788875278528997214633577441--355873611556033310


No 131
>pfam01276 OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain.
Probab=20.26  E-value=59  Score=13.77  Aligned_cols=23  Identities=13%  Similarity=-0.026  Sum_probs=13.5

Q ss_pred             ECHHHHHHCCCEECCCCCEECCC
Q ss_conf             08657874294874636536689
Q gi|254781162|r  141 GDIAYYSKLGFQAVPWKSLILPA  163 (192)
Q Consensus       141 g~~~yY~rfGF~~~~~~~l~~p~  163 (192)
                      -|.++...|+|.+.+...+.+..
T Consensus       202 vDEAhGah~~F~plp~~a~~~ga  224 (417)
T pfam01276       202 FDSAWVGYEQFIPIYADASPMGG  224 (417)
T ss_pred             EECCCCCCCCCCCCCHHHHHCCC
T ss_conf             97887520246878334665678


Done!