HHsearch results for GI: 254781162 and protein with PDBid: 1ro5_A
>1ro5_A Autoinducer synthesis protein LASI; alpha-beta-alpha sandwich, phosphopantetheine fold, signaling protein; 2.30A {Pseudomonas aeruginosa} SCOP: d.108.1.3
Probab=98.63 E-value=5.1e-07 Score=59.69 Aligned_cols=116 Identities=11% Similarity=0.039 Sum_probs=80.8
Q ss_pred CHHHHHHHH---HHHCCCCC---CCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEE------------------
Q ss_conf 989999999---98538987---210013110388887607899998898999999877611------------------
Q gi|254781162|r 40 HDSSICAMH---ADSFGPGR---FVRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPISI------------------ 95 (192)
Q Consensus 40 ~~~di~ai~---~~~fgpgr---~~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~------------------ 95 (192)
....++.++ ..+|--.. ..-..-..++.-+.....-+++.++|++||++++.|...
T Consensus 15 ~~~~~~~~~rlR~~VFv~e~gw~~~~~~~~E~D~~D~~~~~~lv~~~~g~vvg~~Rl~~~~~~~~l~~~f~~~~~~~~~~ 94 (201)
T 1ro5_A 15 DKKLLGEMHKLRAQVFKERKGWDVSVIDEMEIDGYDALSPYYMLIQEDGQVFGCWRILDTTGPYMLKNTFPELLHGKEAP 94 (201)
T ss_dssp CHHHHHHHHHHHHHHHTTCSSSCCCEETTEECCGGGGSCCEEEEEEETTEEEEEEEEEETTSCCHHHHTCGGGGTTCCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHCCCCCCC
T ss_conf 99999999999999987752898899721110357877857999716981689986326898864203223542687657
Q ss_pred CCCCEEEEEEEEECCCCCCCC----HHHHHHHHHHHHHHHCCCCEEEEEECH---HHHHHCCCEECC
Q ss_conf 882238997678851113899----589999999999961388479984086---578742948746
Q gi|254781162|r 96 EKITGHLLGPIVVHPLYQNKG----IGRKLISMSVDAAEKKGSQVIVLVGDI---AYYSKLGFQAVP 155 (192)
Q Consensus 96 ~~~~~~~LgplaV~P~~rg~G----iG~~Li~~~l~~a~~~g~~~v~l~g~~---~yY~rfGF~~~~ 155 (192)
.+.....++.++|+|++++++ ++..|+..+.+.+.+.|...++.+.++ .+|.|+||...+
T Consensus 95 ~~~~i~E~sR~~V~~~~r~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~~~~~~~~r~~~r~G~~~~~ 161 (201)
T 1ro5_A 95 CSPHIWELSRFAINSGQKGSLGFSDCTLEAMRALARYSLQNDIQTLVTVTTVGVEKMMIRAGLDVSR 161 (201)
T ss_dssp CCTTEEEEEEEEECCSTTCCSCSHHHHHHHHHHHHHHHHTTTCCEEEEEEEHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCEEE
T ss_conf 8886699998998432145655318999999999999998899899999458999999986997598