HHsearch results for GI: 254781162 and protein with PDBid: 1y7r_A
>1y7r_A Hypothetical protein SA2161; structural genomics, protein structure initiative, PSI, midwest center for structural genomics, MCSG; 1.70A {Staphylococcus aureus} SCOP: d.108.1.1
Probab=99.61 E-value=3.1e-15 Score=107.78 Aligned_cols=86 Identities=17% Similarity=0.195 Sum_probs=69.3
Q ss_pred CCEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEE--EEC---HHHH
Q ss_conf 60789999889899999987761188223899767885111389958999999999996138847998--408---6578
Q gi|254781162|r 72 LSLSFLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVL--VGD---IAYY 146 (192)
Q Consensus 72 ~~lslVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l--~g~---~~yY 146 (192)
..+++++++++++||++++.. +......+..++|+|+|||+|||++||+++++.+++.|...+.+ ..+ ..||
T Consensus 38 ~~~~~~~~~~~~~vG~~~~~~---~~~~~~~i~~~~v~p~~rg~GiG~~Ll~~~~~~a~~~~~~~~~l~~~~~~~a~~fY 114 (133)
T 1y7r_A 38 ALFTVTLYDKDRLIGMGRVIG---DGGTVFQIVDIAVLKSYQGQAYGSLIMEHIMKYIKNVSVESVYVSLIADYPADKLY 114 (133)
T ss_dssp CSEEEEEEETTEEEEEEEEEE---CSSSEEEEEEEEECGGGCSSSHHHHHHHHHHHHHHHHCCTTCEEEEEEETTHHHHH
T ss_pred CEEEEEEEECCEEEEEEEEEE---CCCEEEEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH
T ss_conf 809999999999999999997---59828999989993788368999999999999999859976999985786899999
Q ss_pred HHCCCEECCCCCEE
Q ss_conf 74294874636536
Q gi|254781162|r 147 SKLGFQAVPWKSLI 160 (192)
Q Consensus 147 ~rfGF~~~~~~~l~ 160 (192)
+|+||++...+...
T Consensus 115 ~k~GF~~~~~~~~g 128 (133)
T 1y7r_A 115 VKFGFMPTEPDSGG 128 (133)
T ss_dssp HTTTCEECTTTEEE
T ss_pred HHCCCEECCCCCCC
T ss_conf 98889991698776