HHsearch results for GI: 254781162 and protein with PDBid: 1yk3_A
>1yk3_A Hypothetical protein RV1347C/MT1389; acyltransferase, GCN5-related fold, structural genomics, PSI, protein structure initiative; HET: BOG; 2.20A {Mycobacterium tuberculosis} SCOP: d.108.1.1
Probab=98.85 E-value=1.7e-08 Score=68.30 Aligned_cols=140 Identities=12% Similarity=-0.055 Sum_probs=90.8
Q ss_pred CCEEEEEECCHHHHHHHHHHH-------C-C-CCCCCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEEC-----
Q ss_conf 120344207989999999985-------3-8-9872100131103888876078999988989999998776118-----
Q gi|254781162|r 31 GAFFLERLEHDSSICAMHADS-------F-G-PGRFVRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPISIE----- 96 (192)
Q Consensus 31 ~~~~~~R~e~~~di~ai~~~~-------f-g-pgr~~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~~----- 96 (192)
+.-+.+|+=+..|.+.++... | . +....++...++..........++++.+|+.||++.+.....+
T Consensus 40 ~~~~~LR~~~~~D~~~l~~w~ndp~V~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~dg~~iG~~~~~~~~~~~~~~~ 119 (210)
T 1yk3_A 40 EPPYGLRVAQLTDAEMLAEWMNRPHLAAAWEYDWPASRWRQHLNAQLEGTYSLPLIGSWHGTDGGYLELYWAAKDLISHY 119 (210)
T ss_dssp CTTEEEEECCGGGHHHHHHHHTSHHHHHHHCCCCCHHHHHHHHHHHHTSSSEEEEEEEETTEEEEEEEEEEGGGBGGGGS
T ss_pred CCCEEEECCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEECCCCCCCCCC
T ss_conf 99869962988999999999759999987179999999999999742347458999999999987446761544422223
Q ss_pred ---CCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHH--HCCCCEEEEEEC------HHHHHHCCCEECCCCCEECCCCC
Q ss_conf ---8223899767885111389958999999999996--138847998408------65787429487463653668999
Q gi|254781162|r 97 ---KITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAE--KKGSQVIVLVGD------IAYYSKLGFQAVPWKSLILPAPV 165 (192)
Q Consensus 97 ---~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~--~~g~~~v~l~g~------~~yY~rfGF~~~~~~~l~~p~pv 165 (192)
......+.-+.+.|++||+|+|+++++.+++.+- ..|...|.+.-+ ..+|+|.||+.+.. +.+|.
T Consensus 120 ~~~~~~~~~~~~~i~~~~~~G~G~g~~al~~ll~~~f~~~~~~~ri~~~v~~~N~~s~rl~ek~GF~~~ge--~~~p~-- 195 (210)
T 1yk3_A 120 YDADPYDLGLHAAIADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDPDHRNTATRRLCEWAGCKFLGE--HDTTN-- 195 (210)
T ss_dssp SCCCTTCEEEEEEESCHHHHTTTHHHHHHHHHHHHHHHHCTTCCEEEECCBTTCHHHHHHHHHHTCEEEEE--EECSS--
T ss_pred CCCCCCCEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEE--EECCC--
T ss_conf 36888845999999665651675799999999999997388920999998747899999999769989889--81799--
Q ss_pred CHHHEEEEE
Q ss_conf 956669843
Q gi|254781162|r 166 DPNRVLFLP 174 (192)
Q Consensus 166 ~~~~~l~l~ 174 (192)
....+++|+
T Consensus 196 k~~~l~~l~ 204 (210)
T 1yk3_A 196 RRMALYALE 204 (210)
T ss_dssp CEEEEEEEE
T ss_pred CCEEEEEEC
T ss_conf 848999970