HHsearch results for GI: 254781162 and protein with PDBid: 1yk3_A

>1yk3_A Hypothetical protein RV1347C/MT1389; acyltransferase, GCN5-related fold, structural genomics, PSI, protein structure initiative; HET: BOG; 2.20A {Mycobacterium tuberculosis} SCOP: d.108.1.1
Probab=98.85  E-value=1.7e-08  Score=68.30  Aligned_cols=140  Identities=12%  Similarity=-0.055  Sum_probs=90.8

Q ss_pred             CCEEEEEECCHHHHHHHHHHH-------C-C-CCCCCCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEEC-----
Q ss_conf             120344207989999999985-------3-8-9872100131103888876078999988989999998776118-----
Q gi|254781162|r   31 GAFFLERLEHDSSICAMHADS-------F-G-PGRFVRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPISIE-----   96 (192)
Q Consensus        31 ~~~~~~R~e~~~di~ai~~~~-------f-g-pgr~~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~~-----   96 (192)
                      +.-+.+|+=+..|.+.++...       | . +....++...++..........++++.+|+.||++.+.....+     
T Consensus        40 ~~~~~LR~~~~~D~~~l~~w~ndp~V~~~~~~~~~~e~~~~~~~~~~~~~~~~~~i~~~dg~~iG~~~~~~~~~~~~~~~  119 (210)
T 1yk3_A           40 EPPYGLRVAQLTDAEMLAEWMNRPHLAAAWEYDWPASRWRQHLNAQLEGTYSLPLIGSWHGTDGGYLELYWAAKDLISHY  119 (210)
T ss_dssp             CTTEEEEECCGGGHHHHHHHHTSHHHHHHHCCCCCHHHHHHHHHHHHTSSSEEEEEEEETTEEEEEEEEEEGGGBGGGGS
T ss_pred             CCCEEEECCCHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEECCCCCCCCCC
T ss_conf             99869962988999999999759999987179999999999999742347458999999999987446761544422223


Q ss_pred             ---CCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHH--HCCCCEEEEEEC------HHHHHHCCCEECCCCCEECCCCC
Q ss_conf             ---8223899767885111389958999999999996--138847998408------65787429487463653668999
Q gi|254781162|r   97 ---KITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAE--KKGSQVIVLVGD------IAYYSKLGFQAVPWKSLILPAPV  165 (192)
Q Consensus        97 ---~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~--~~g~~~v~l~g~------~~yY~rfGF~~~~~~~l~~p~pv  165 (192)
                         ......+.-+.+.|++||+|+|+++++.+++.+-  ..|...|.+.-+      ..+|+|.||+.+..  +.+|.  
T Consensus       120 ~~~~~~~~~~~~~i~~~~~~G~G~g~~al~~ll~~~f~~~~~~~ri~~~v~~~N~~s~rl~ek~GF~~~ge--~~~p~--  195 (210)
T 1yk3_A          120 YDADPYDLGLHAAIADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDPDHRNTATRRLCEWAGCKFLGE--HDTTN--  195 (210)
T ss_dssp             SCCCTTCEEEEEEESCHHHHTTTHHHHHHHHHHHHHHHHCTTCCEEEECCBTTCHHHHHHHHHHTCEEEEE--EECSS--
T ss_pred             CCCCCCCEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEE--EECCC--
T ss_conf             36888845999999665651675799999999999997388920999998747899999999769989889--81799--


Q ss_pred             CHHHEEEEE
Q ss_conf             956669843
Q gi|254781162|r  166 DPNRVLFLP  174 (192)
Q Consensus       166 ~~~~~l~l~  174 (192)
                      ....+++|+
T Consensus       196 k~~~l~~l~  204 (210)
T 1yk3_A          196 RRMALYALE  204 (210)
T ss_dssp             CEEEEEEEE
T ss_pred             CCEEEEEEC
T ss_conf             848999970