HHsearch results for GI: 254781162 and protein with PDBid: 2d4p_A
>2d4p_A Hypothetical protein TTHA1254; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Thermus thermophilus HB8} SCOP: d.108.1.1 PDB: 2d4o_A
Probab=94.83 E-value=0.16 Score=27.54 Aligned_cols=109 Identities=19% Similarity=0.134 Sum_probs=76.3
Q ss_pred EEEEECCHHHHHHHHHHHCCCCCC--CCEEEEEECCCCCCCCEEEEEEECCEEEEEEEEEEEEECCCCEEEEEEEEECCC
Q ss_conf 344207989999999985389872--100131103888876078999988989999998776118822389976788511
Q gi|254781162|r 34 FLERLEHDSSICAMHADSFGPGRF--VRAAVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPISIEKITGHLLGPIVVHPL 111 (192)
Q Consensus 34 ~~~R~e~~~di~ai~~~~fgpgr~--~~~~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv~~~~~~~~~LgplaV~P~ 111 (192)
|..|+=.+.|.+++.... |+. +.++.+.-++ ...||||++++.+.|++.-.++..+..+...+..+ +
T Consensus 1 mr~rp~~e~dld~L~~~a---G~~~~Sl~al~Fy~R----sgHsFvA~e~~~~~GfvLAQaVWqG~rptVlv~rl----~ 69 (141)
T 2d4p_A 1 MRFRPFTEEDLDRLNRLA---GKRPVSLGALRFFAR----TGHSFLAEEGEEPMGFALAQAVWQGEATTVLVTRI----E 69 (141)
T ss_dssp CEEECCCGGGHHHHHHTS---TTSCCCHHHHHHHHH----HSCCEEEEETTEEEEEEEEEEEECSSSEEEEEEEE----E
T ss_pred CCCCCCCCHHHHHHHHHH---CCCCCCHHHHHHHHH----CCCEEEEECCCCCEEEEEHHHHHCCCCCEEEEEEC----C
T ss_conf 953467806689999974---647877677322200----47604774388614665413566588746999824----8
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCEEEEEECH------HHHHHCCCEE
Q ss_conf 13899589999999999961388479984086------5787429487
Q gi|254781162|r 112 YQNKGIGRKLISMSVDAAEKKGSQVIVLVGDI------AYYSKLGFQA 153 (192)
Q Consensus 112 ~rg~GiG~~Li~~~l~~a~~~g~~~v~l~g~~------~yY~rfGF~~ 153 (192)
-+....-..|+++..+-|-..+.--+.+.-+| ..-+--||..
T Consensus 70 ~~~~~~~~gLL~AvvKSAYDa~VYev~~~l~pa~~a~~~al~a~~~~~ 117 (141)
T 2d4p_A 70 GRSVEALRGLLRAVVKSAYDAGVYEVALHLDPERKELEEALKAEGFAL 117 (141)
T ss_dssp ESSHHHHHHHHHHHHHHHHHTTCSEEEECCCTTCHHHHHHHHHTTCCC
T ss_pred CCCHHHHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHHCCCC
T ss_conf 974799999999999865234247998527888999999998523245