HHsearch results for GI: 254781162 and protein with PDBid: 3fnc_A
>3fnc_A Protein LIN0611, putative acetyltransferase; GNAT, RIMI, structural genomics, PSI-2, protein structure initiative; 1.75A {Listeria innocua CLIP11262}
Probab=99.53 E-value=9.6e-15 Score=104.93 Aligned_cols=128 Identities=13% Similarity=0.184 Sum_probs=85.5
Q ss_pred CCEEEEEECCHHHHHHHHHHH-------CCC---CCC----CCE---EEEEECCCCCCCCEEEEEEECCEEEEEEEEEEE
Q ss_conf 120344207989999999985-------389---872----100---131103888876078999988989999998776
Q gi|254781162|r 31 GAFFLERLEHDSSICAMHADS-------FGP---GRF----VRA---AVLLREQGMHDLSLSFLCAEGKRIVGSVRMTPI 93 (192)
Q Consensus 31 ~~~~~~R~e~~~di~ai~~~~-------fgp---gr~----~~~---~~~lR~~~~~~~~lslVA~~~~~IVG~i~~~pv 93 (192)
.|++.||+-+.+|+++|.++. |.+ ... ... ...++. .......+|++.+++|||++.+.+.
T Consensus 3 ~M~~~IR~a~~~D~~~i~~l~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~ivG~~~~~~~ 80 (163)
T 3fnc_A 3 AMDFHIRKATNSDAEAIQHVATTSWHHTYQDLIPSDVQDDFLKRFYNVETLHN--RISATPFAVLEQADKVIGFANFIEL 80 (163)
T ss_dssp -CCEEEEECCGGGHHHHHHHHHHHHHHHTTTTSCHHHHHHHHHHHSSHHHHHH--HHHHSCEEEEEETTEEEEEEEEEEE
T ss_pred CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHH--HCCCCCEEEEEECCEEEEEEEEEEC
T ss_conf 98659888989999999999999999873142899999999998437899996--4458858999999999999999974
Q ss_pred EECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE-EC---HHHHHHCCCEECCCCCEECCC
Q ss_conf 11882238997678851113899589999999999961388479984-08---657874294874636536689
Q gi|254781162|r 94 SIEKITGHLLGPIVVHPLYQNKGIGRKLISMSVDAAEKKGSQVIVLV-GD---IAYYSKLGFQAVPWKSLILPA 163 (192)
Q Consensus 94 ~~~~~~~~~LgplaV~P~~rg~GiG~~Li~~~l~~a~~~g~~~v~l~-g~---~~yY~rfGF~~~~~~~l~~p~ 163 (192)
. .....+..++|+|+|||+|||++||+++++.++......+.+. .+ ..||+|+||+.+........|
T Consensus 81 ~---~~~~~i~~l~V~p~~rg~GiG~~Ll~~~~~~~~~~~~~~l~v~~~N~~a~~fY~k~GF~~~~~~~~~~~G 151 (163)
T 3fnc_A 81 E---KGKSELAAFYLLPEVTQRGLGTELLEVGMTLFHVPLPMFVNVEKGNETAIHFYKAKGFVQVEEFTEDFYG 151 (163)
T ss_dssp E---TTEEEEEEEEECGGGCSSSHHHHHHHHHHHHTTCCSSEEEEEETTCHHHHHHHHHTTCEEEEEEEEEETT
T ss_pred C---CCEEEEEEEEECHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCEEEEEEEEEECC
T ss_conf 7---9869999999998985999999999999999639894689990799999999997799999889730499