Query gi|254781163|ref|YP_003065576.1| hypothetical protein CLIBASIA_05350 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 214
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 33803
Date Wed Jun 1 22:37:14 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781163.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >1mc3_A Glucose-1-phosphate th 63.8 3.3 9.6E-05 21.8 1.5 29 111-139 15-44 (46)
2 >3haj_A Human pacsin2 F-BAR; p 49.7 18 0.00054 16.7 6.6 58 105-162 34-94 (350)
3 >1ois_A DNA topoisomerase I; D 44.7 22 0.00064 16.2 4.3 63 124-191 24-89 (94)
4 >2oo9_A E3 ubiquitin-protein l 39.6 21 0.00063 16.3 2.4 32 73-117 12-43 (46)
5 >2ooa_A E3 ubiquitin-protein l 35.7 27 0.00079 15.6 2.4 16 102-117 35-50 (52)
6 >2d9s_A CBL E3 ubiquitin prote 32.7 32 0.00095 15.1 2.4 18 101-118 32-49 (53)
7 >2o8s_A AGR_C_984P; all alpha- 31.1 35 0.001 14.8 2.7 31 5-35 21-56 (124)
8 >3hah_A Human pacsin1 F-BAR; p 30.5 36 0.0011 14.8 6.8 56 105-160 35-93 (191)
9 >3kzx_A HAD-superfamily hydrol 28.4 39 0.0011 14.5 2.8 32 157-188 9-40 (63)
10 >2b9s_A Topoisomerase I-like p 25.1 34 0.001 14.9 1.5 33 125-157 25-57 (96)
11 >1nv8_A HEMK protein; class I 23.5 29 0.00085 15.4 0.8 18 31-48 10-27 (81)
12 >2yzi_A Hypothetical protein P 23.1 47 0.0014 14.0 1.9 23 155-177 13-35 (60)
13 >2ef7_A Hypothetical protein S 22.7 44 0.0013 14.1 1.7 23 155-177 9-31 (56)
14 >3ddj_A CBS domain-containing 21.9 47 0.0014 14.0 1.7 24 154-177 13-36 (64)
15 >3ddj_A CBS domain-containing 21.8 45 0.0013 14.1 1.6 24 154-177 8-31 (51)
16 >3ddj_A CBS domain-containing 21.0 50 0.0015 13.8 1.7 24 153-176 19-42 (51)
17 >1a31_A Protein (topoisomerase 20.6 54 0.0016 13.5 2.8 61 125-191 25-85 (88)
18 >3f6n_A Virion-associated prot 20.3 55 0.0016 13.5 6.2 53 107-159 6-58 (129)
19 >1zfj_A Inosine monophosphate 20.2 52 0.0015 13.7 1.6 21 155-175 13-33 (63)
No 1
>>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} (A:251-296)
Probab=63.84 E-value=3.3 Score=21.82 Aligned_cols=29 Identities=24% Similarity=0.423 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q ss_conf 999999998312-32379999998552335
Q gi|254781163|r 111 DIAQLFTLIDNI-ENGYGQYLEKISQKNVE 139 (214)
Q Consensus 111 diaqlftlidni-engygqylekisqknve 139 (214)
|..||..+.+.. .|+|||||-++.+....
T Consensus 15 ~~~~l~~~a~~~~ks~YG~YL~~l~~~~~~ 44 (46)
T 1mc3_A 15 DDEGVKRAASSLAKTGYGQYLLELLRARPR 44 (46)
T ss_dssp CHHHHHHHHHHTTTSHHHHHHHHTSSCCC-
T ss_pred CHHHHHHHHHHCCCCCHHHHHHHHHHHCCC
T ss_conf 999999999873489589999999972768
No 2
>>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens} (A:1-124,A:261-486)
Probab=49.69 E-value=18 Score=16.74 Aligned_cols=58 Identities=12% Similarity=0.180 Sum_probs=43.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHH
Q ss_conf 6368999999999983123237999999855233566---530078999999999999999
Q gi|254781163|r 105 NIEMAKDIAQLFTLIDNIENGYGQYLEKISQKNVEKD---FFNSKFFTHFKEYIDEVDKIL 162 (214)
Q Consensus 105 niemakdiaqlftlidniengygqylekisqknvekd---ffnskffthfkeyidevdkil 162 (214)
.+...+++..+|.-.-+||.-|++-|.|++++--.+. -..+.+-.-|....++++.+-
T Consensus 34 ~~~~~~~~~~~~~~ra~~E~~ya~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 94 (350)
T 3haj_A 34 GHRLCSDLMNCLHERARIEKAYAQQLTEWARRWRQLVEKGPQYGTVEKAWMAFMSEAERVS 94 (350)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999987653168765579999999999999999
No 3
>>1ois_A DNA topoisomerase I; DNA-binding protein; HET: DNA; 1.90A {Saccharomyces cerevisiae} (A:20-113)
Probab=44.68 E-value=22 Score=16.23 Aligned_cols=63 Identities=21% Similarity=0.432 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---CHHHHHHHHHHHHHHH
Q ss_conf 2379999998552335665300789999999999999999845587636556---8899999999999999
Q gi|254781163|r 124 NGYGQYLEKISQKNVEKDFFNSKFFTHFKEYIDEVDKILMRYGIEGIPLTDF---DHEKIKSYLTHIKIVR 191 (214)
Q Consensus 124 ngygqylekisqknvekdffnskffthfkeyidevdkilmrygiegipltdf---dhekiksylthikivr 191 (214)
.--+.|-..+....++++-||..||..|+..+.+-.+ ..+++..+|| |-.+|..|+.--+--|
T Consensus 24 EvAtf~a~ml~tdy~~k~~F~kNFf~Df~~~l~k~~~-----~~~~~~Ik~f~kCDF~~i~~~~~~~~E~k 89 (94)
T 1ois_A 24 EVAGFFAALLESDHAKNPVFQKNFFNDFLQVLKESGG-----PLNGIEIKEFSRCDFTKMFDYFQLQKEQK 89 (94)
T ss_dssp HHHHHHHHTTTSSGGGCHHHHHHHHHHHHHHHHHTTC-----CTTCCCCCCGGGEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC-----CCCCCCCCCHHHCCCHHHHHHHHHHHHHH
T ss_conf 9999999884786337838899889999998504127-----66675627075588789999999999998
No 4
>>2oo9_A E3 ubiquitin-protein ligase CBL; alpha-helical domain, homodimer; 2.10A {Homo sapiens} (A:)
Probab=39.60 E-value=21 Score=16.28 Aligned_cols=32 Identities=31% Similarity=0.499 Sum_probs=19.9
Q ss_pred HCCCCCHHEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf 242010012114566789999999999947986368999999999
Q gi|254781163|r 73 FGEKFSYDVSIKIVLAINVLLFSFVIALLGNPNIEMAKDIAQLFT 117 (214)
Q Consensus 73 fgekfsydvsikivlainvllfsfviallgnpniemakdiaqlft 117 (214)
.++-+|+|--++-. ...+.|+|||+||-.-|.
T Consensus 12 m~~GYs~~~v~rAL-------------~Ia~NniemA~~ILrEF~ 43 (46)
T 2oo9_A 12 XSQGYSYQDIQKAL-------------VIAQNNIEXAKNILREFA 43 (46)
T ss_dssp HHTTBCHHHHHHHH-------------HHTTTCHHHHHHHHHHHC
T ss_pred HHCCCCHHHHHHHH-------------HHHHCCHHHHHHHHHHHC
T ss_conf 98677699999999-------------998710999999999870
No 5
>>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A (A:)
Probab=35.72 E-value=27 Score=15.61 Aligned_cols=16 Identities=31% Similarity=0.565 Sum_probs=13.0
Q ss_pred CCCCHHHHHHHHHHHH
Q ss_conf 7986368999999999
Q gi|254781163|r 102 GNPNIEMAKDIAQLFT 117 (214)
Q Consensus 102 gnpniemakdiaqlft 117 (214)
..-|||||++|-.-|.
T Consensus 35 a~NniemA~~ILrEFv 50 (52)
T 2ooa_A 35 AQNNVEVARSILREFA 50 (52)
T ss_dssp TTTCHHHHHHHHHHHC
T ss_pred HHCCHHHHHHHHHHHC
T ss_conf 8621999999999853
No 6
>>2d9s_A CBL E3 ubiquitin protein ligase; UBA domain, dimer, protein binding, structural genomics, NPPSFA; NMR {Mus musculus} (A:)
Probab=32.71 E-value=32 Score=15.08 Aligned_cols=18 Identities=44% Similarity=0.606 Sum_probs=14.1
Q ss_pred HCCCCHHHHHHHHHHHHH
Q ss_conf 479863689999999999
Q gi|254781163|r 101 LGNPNIEMAKDIAQLFTL 118 (214)
Q Consensus 101 lgnpniemakdiaqlftl 118 (214)
...-|+|||++|-.-|..
T Consensus 32 Ia~NniemA~~ILrEFvs 49 (53)
T 2d9s_A 32 IAHNNIEMAKNILREFSG 49 (53)
T ss_dssp HTTTCHHHHHHHHHHHTS
T ss_pred HHHCCHHHHHHHHHHHCC
T ss_conf 986219999999999724
No 7
>>2o8s_A AGR_C_984P; all alpha-helical protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Agrobacterium tumefaciens str} (A:69-192)
Probab=31.14 E-value=35 Score=14.83 Aligned_cols=31 Identities=23% Similarity=0.387 Sum_probs=21.7
Q ss_pred HHHHHHHHCC-----HHHHHHHHHHHHHHHCCHHHH
Q ss_conf 4420121013-----448999999984201136677
Q gi|254781163|r 5 EDSIPKITSS-----TGKCLKFIMRAFGLFDSAEQR 35 (214)
Q Consensus 5 edsipkitss-----tgkclkfimrafglfdsaeqr 35 (214)
+..|.+|+|. .-+-+.|+|+||||=+....+
T Consensus 21 ~~~I~~Itsvddll~d~rL~~~al~AfGL~~~~~~~ 56 (124)
T 2o8s_A 21 REKIGSVKSIDDFXADTRLYNYALKAHGLEDXAYAK 56 (124)
T ss_dssp HHHGGGCCSHHHHHTCHHHHHHHHHHTTGGGSTTCH
T ss_pred HHHCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCHH
T ss_conf 997278778999834789999999976998442519
No 8
>>3hah_A Human pacsin1 F-BAR; pacsin,syndapin,FAP52,F-BAR, coiled coil, cytoplasm, endocytosis, phosphoprotein, polymorphism, SH3 domain; 2.77A {Homo sapiens} PDB: 3hai_A (A:1-125,A:260-325)
Probab=30.52 E-value=36 Score=14.76 Aligned_cols=56 Identities=18% Similarity=0.200 Sum_probs=38.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHH
Q ss_conf 6368999999999983123237999999855233566530---0789999999999999
Q gi|254781163|r 105 NIEMAKDIAQLFTLIDNIENGYGQYLEKISQKNVEKDFFN---SKFFTHFKEYIDEVDK 160 (214)
Q Consensus 105 niemakdiaqlftlidniengygqylekisqknvekdffn---skffthfkeyidevdk 160 (214)
.+...+|++++|.-.-+||.-|++-|.|++.+--.+..-. +-+-..+.....+.++
T Consensus 35 g~kl~~el~~~lqERA~IE~eYAk~L~kLs~k~~~~~~~~~e~gsl~~aw~~i~~e~e~ 93 (191)
T 3hah_A 35 GHRLCNDLMNCVQERAKIEKAYGQQLTDWAKRWRQLIEKGPQYGSLERAWGAIMTEADK 93 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999998874314787766699999999999999
No 9
>>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant 1; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 1.90A {Ehrlichia chaffeensis} (A:39-101)
Probab=28.43 E-value=39 Score=14.52 Aligned_cols=32 Identities=22% Similarity=0.379 Sum_probs=27.9
Q ss_pred HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99999998455876365568899999999999
Q gi|254781163|r 157 EVDKILMRYGIEGIPLTDFDHEKIKSYLTHIK 188 (214)
Q Consensus 157 evdkilmrygiegipltdfdhekiksylthik 188 (214)
-+++.|-+.|...|.|.+.+..+|.-||+|.-
T Consensus 9 t~~~VL~~Mg~~~IdL~sI~~sti~kYL~~~L 40 (63)
T 3kzx_A 9 TFYQVLDQMGYKNIDLDSIPNSTIPKYLITLL 40 (63)
T ss_dssp HHHHHHHHTTCCCCCCTTSCTTTHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999998699943799874136999999985
No 10
>>2b9s_A Topoisomerase I-like protein; vanadate complex, isomerase/DNA complex; HET: DNA; 2.27A {Leishmania donovani} (A:35-104,A:156-181)
Probab=25.13 E-value=34 Score=14.89 Aligned_cols=33 Identities=15% Similarity=0.321 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 379999998552335665300789999999999
Q gi|254781163|r 125 GYGQYLEKISQKNVEKDFFNSKFFTHFKEYIDE 157 (214)
Q Consensus 125 gygqylekisqknvekdffnskffthfkeyide 157 (214)
--+.|-..+....++++-||..||..|++...+
T Consensus 25 VAtFyA~ml~tdy~~k~vF~kNFF~Dfrk~l~k 57 (96)
T 2b9s_A 25 VATMFAVMKEHDYYRMEVFRRNFFESWREILDK 57 (96)
T ss_dssp HHHHHHTTTTSGGGGCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 999999870895436649999889999998334
No 11
>>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} (A:1-81)
Probab=23.45 E-value=29 Score=15.40 Aligned_cols=18 Identities=44% Similarity=0.765 Sum_probs=13.3
Q ss_pred CHHHHHHHHHHHHHHHHH
Q ss_conf 366779999998872999
Q gi|254781163|r 31 SAEQRKLWSLLRYWSVEF 48 (214)
Q Consensus 31 saeqrklwsllrywsvef 48 (214)
|.-.||.|||.|--|-+.
T Consensus 10 sg~erkiw~lir~~s~~l 27 (81)
T 1nv8_A 10 SGAERKIWSLIRDCSGKL 27 (81)
T ss_dssp ----CCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHH
T ss_conf 879999999999999998
No 12
>>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} (A:14-73)
Probab=23.07 E-value=47 Score=13.95 Aligned_cols=23 Identities=9% Similarity=0.366 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf 99999999984558763655688
Q gi|254781163|r 155 IDEVDKILMRYGIEGIPLTDFDH 177 (214)
Q Consensus 155 idevdkilmrygiegipltdfdh 177 (214)
+.|+-+++.+++|.++|..|-+.
T Consensus 13 i~ea~~~m~~~~i~~lpVvD~~~ 35 (60)
T 2yzi_A 13 VQEASRLXXEFDVGSLVVINDDG 35 (60)
T ss_dssp HHHHHHHHHHHTCSEEEEECTTS
T ss_pred HHHHHHHHHHCCCCEEEEECCCC
T ss_conf 99999999986998685304542
No 13
>>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.10A {Sulfolobus tokodaii str} (A:78-133)
Probab=22.67 E-value=44 Score=14.15 Aligned_cols=23 Identities=17% Similarity=0.313 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf 99999999984558763655688
Q gi|254781163|r 155 IDEVDKILMRYGIEGIPLTDFDH 177 (214)
Q Consensus 155 idevdkilmrygiegipltdfdh 177 (214)
+.|+-+++.++++.++|..|=+.
T Consensus 9 i~ea~~lm~~~~i~~lPVVD~~~ 31 (56)
T 2ef7_A 9 ITGALALXRQFNIRHLPVVDDKG 31 (56)
T ss_dssp HHHHHHHHHHHTCSEEEEECTTS
T ss_pred HHHHHHHHHHCCCCEEEEEECCC
T ss_conf 00778999884961899993899
No 14
>>3ddj_A CBS domain-containing protein; NP_344512.1, structural genomics, joint center for structural genomics, JCSG; HET: AMP; 1.80A {Sulfolobus solfataricus} (A:233-296)
Probab=21.89 E-value=47 Score=13.98 Aligned_cols=24 Identities=8% Similarity=0.117 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf 999999999984558763655688
Q gi|254781163|r 154 YIDEVDKILMRYGIEGIPLTDFDH 177 (214)
Q Consensus 154 yidevdkilmrygiegipltdfdh 177 (214)
-+.|+-+++.++|+.++|.+|=+.
T Consensus 13 ~i~ea~~~m~~~~i~~lpVvDe~~ 36 (64)
T 3ddj_A 13 SVNRAAAEXIVKRIGSLLILNKDN 36 (64)
T ss_dssp BHHHHHHHHHHHTCSEEEEECTTS
T ss_pred CHHHHHHHHHHHCCCEEEEECCCC
T ss_conf 199999999982998899990799
No 15
>>3ddj_A CBS domain-containing protein; NP_344512.1, structural genomics, joint center for structural genomics, JCSG; HET: AMP; 1.80A {Sulfolobus solfataricus} (A:104-154)
Probab=21.75 E-value=45 Score=14.07 Aligned_cols=24 Identities=13% Similarity=0.170 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCH
Q ss_conf 999999999984558763655688
Q gi|254781163|r 154 YIDEVDKILMRYGIEGIPLTDFDH 177 (214)
Q Consensus 154 yidevdkilmrygiegipltdfdh 177 (214)
-+.|+-+++.+++|.++|..|=++
T Consensus 8 ~i~ea~~~m~~~~i~~lpVvD~~~ 31 (51)
T 3ddj_A 8 DEFTAINIXVTRNFGSLPVVDIND 31 (51)
T ss_dssp CHHHHHHHHHHHTCSEEEEECTTS
T ss_pred CHHHHHHHHHHHCCCEEEEEEECC
T ss_conf 799999999983988079995234
No 16
>>3ddj_A CBS domain-containing protein; NP_344512.1, structural genomics, joint center for structural genomics, JCSG; HET: AMP; 1.80A {Sulfolobus solfataricus} (A:155-205)
Probab=21.01 E-value=50 Score=13.78 Aligned_cols=24 Identities=29% Similarity=0.527 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 999999999998455876365568
Q gi|254781163|r 153 EYIDEVDKILMRYGIEGIPLTDFD 176 (214)
Q Consensus 153 eyidevdkilmrygiegipltdfd 176 (214)
..+.|+-+++.++++.++|..|=+
T Consensus 19 ~~i~ea~~lm~~~~i~~lPVVD~~ 42 (51)
T 3ddj_A 19 VRLDQAVKLXLRRGFRRLPVIDDD 42 (51)
T ss_dssp SBHHHHHHHHHHHTCSEEEEECTT
T ss_pred CCHHHHHHHHHHHCCCEEEEECCC
T ss_conf 919999999987376405787278
No 17
>>1a31_A Protein (topoisomerase I); topoisomerase I/DNA, topoisomerase I; HET: DNA 5IU PTR; 2.10A {Homo sapiens} (A:58-145)
Probab=20.56 E-value=54 Score=13.54 Aligned_cols=61 Identities=16% Similarity=0.374 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 3799999985523356653007899999999999999998455876365568899999999999999
Q gi|254781163|r 125 GYGQYLEKISQKNVEKDFFNSKFFTHFKEYIDEVDKILMRYGIEGIPLTDFDHEKIKSYLTHIKIVR 191 (214)
Q Consensus 125 gygqylekisqknvekdffnskffthfkeyidevdkilmrygiegipltdfdhekiksylthikivr 191 (214)
--+.|-..+....++++-||..||..|+..+..-.+.. |.- +.+.|-.+|..|+..-+--|
T Consensus 25 vAtf~a~ml~tdy~~k~~F~kNFf~Df~~~l~~~~~~~----Ik~--f~kcDF~~i~~~~~~~~E~k 85 (88)
T 1a31_A 25 VATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTNEEKNI----ITN--LSKCDFTQMSQYFKAQTEAR 85 (88)
T ss_dssp HHHHHHTTTTSGGGGCHHHHHHHHHHHHHHSCHHHHHH----CCC--GGGEECHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCC----CCC--HHHCCCHHHHHHHHHHHHHH
T ss_conf 99999998489553763989988999999717001766----482--54388789999999999998
No 18
>>3f6n_A Virion-associated protein; coiled-coil, viral protein, tetramer, DNA-binding, DNA-binding protein; 3.10A {Cauliflower mosaic virus} (A:)
Probab=20.31 E-value=55 Score=13.50 Aligned_cols=53 Identities=9% Similarity=0.211 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Q ss_conf 68999999999983123237999999855233566530078999999999999
Q gi|254781163|r 107 EMAKDIAQLFTLIDNIENGYGQYLEKISQKNVEKDFFNSKFFTHFKEYIDEVD 159 (214)
Q Consensus 107 emakdiaqlftlidniengygqylekisqknvekdffnskffthfkeyidevd 159 (214)
+.++.|.++.+.|-.++.--.++++|+...+.+++-..+-----.|+.-|+.|
T Consensus 6 ~I~~eI~el~~~ik~l~~~i~~Il~Kl~s~~~t~~~lEsiAAKIIkDisd~I~ 58 (129)
T 3f6n_A 6 QIQKEVSEILSDQKSMKADIKAILELLGSQNPIKESLETVAAKIVNDLTKLIN 58 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999974279972034689999999999999987
No 19
>>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} (A:97-159)
Probab=20.21 E-value=52 Score=13.68 Aligned_cols=21 Identities=29% Similarity=0.782 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHCCCCCCCCCC
Q ss_conf 999999999845587636556
Q gi|254781163|r 155 IDEVDKILMRYGIEGIPLTDF 175 (214)
Q Consensus 155 idevdkilmrygiegipltdf 175 (214)
+.|+.+++.+++|.++|..|-
T Consensus 13 v~ea~~lm~~~~i~~lpVvD~ 33 (63)
T 1zfj_A 13 VSEAEELXQRYRISGVPIVET 33 (63)
T ss_dssp HHHHHHHHHHTTCSEEEEESC
T ss_pred HHHHHHHHHHCCCCCCEEEEC
T ss_conf 777889987617897547423
Done!