HHsearch alignment for GI: 254781165 and conserved domain: TIGR03666
>TIGR03666 Rv2061_F420 PPOX class probable F420-dependent enzyme, Rv2061 family. A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomycetales, make F420. A variant of the Partial Phylogenetic Profiling algorithm, SIMBAL, shows that this protein likely binds F420 in a cleft similar to that in which the homologous enzyme pyridoxamine phosphate oxidase (PPOX) binds FMN.
Probab=97.44 E-value=0.00065 Score=42.71 Aligned_cols=85 Identities=19% Similarity=0.099 Sum_probs=66.2
Q ss_pred CCCCEEEEEEECCCCCEEEEEEEHHEEECCEEEEEECCCCCCHHHHHCCCCEEEEEECCCCE-EEEEEEEEEECCCHHHH
Q ss_conf 89557999858599877322101300003305899517852012231189479997366640-89999987521763788
Q gi|254781165|r 29 HDPHAVVLATADRMGFPNARVVLIKHFDQEGFVFYTNSQSPKGKEILENPKASLCFHWKSLA-RQLRVRGLVEKYCDLAS 107 (201)
Q Consensus 29 ~~p~a~~LaTvd~~g~p~~R~V~lr~~~~~g~~f~Tn~~S~K~~~l~~np~~al~f~w~~~~-rQiRi~G~~~~l~~~~~ 107 (201)
T Consensus 10 ~~~kyv~LtT~rkDG~pv~TPVW~a-~~~~~l~v~T~~~s~KvkRir~nprV~l~~Cd~rG~~~g~~v~g~Arild~~e~ 88 (132)
T TIGR03666 10 ARARYALLTTFRKDGTPVPTPVWAA-VDGDKLLVRTKEDSWKVKRIRNNPRVTLAPCDRRGRPTGPVVPGRARILDGAET 88 (132)
T ss_pred HHCCEEEEEEECCCCCCCCCCEEEE-ECCCEEEEEECCCCHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEEEECCHHHH
T ss_conf 1163899999999998768666999-819999999668638887653199559996588898589867779998888999
Q ss_pred HHHHHCC
Q ss_conf 8975238
Q gi|254781165|r 108 DHYYASR 114 (201)
Q Consensus 108 d~yf~~R 114 (201)
T Consensus 89 ~~~~~~l 95 (132)
T TIGR03666 89 ARARDLL 95 (132)
T ss_pred HHHHHHH
T ss_conf 9999999