HHsearch alignment for GI: 254781165 and conserved domain: TIGR03668
>TIGR03668 Rv0121_F420 PPOX class probable F420-dependent enzyme, Rv0121 family. A Genome Properties metabolic reconstruction for F420 biosynthesis shows that slightly over 10 percent of all prokaryotes with fully sequenced genomes, including about two thirds of the Actinomycetales, make F420. A variant of the Partial Phylogenetic Profiling algorithm, SIMBAL, shows that this protein likely binds F420 in a cleft similar to that in which the homologous enzyme pyridoxamine phosphate oxidase (PPOX) binds FMN.
Probab=93.73 E-value=0.54 Score=25.80 Aligned_cols=75 Identities=23% Similarity=0.227 Sum_probs=49.7
Q ss_pred CCCEEEEEEECCCCCEEEEEEEHHEE------ECCEEEEEECCC------CCCHHHHHCCCCEEEEEE-----CCCCEEE
Q ss_conf 95579998585998773221013000------033058995178------520122311894799973-----6664089
Q gi|254781165|r 30 DPHAVVLATADRMGFPNARVVLIKHF------DQEGFVFYTNSQ------SPKGKEILENPKASLCFH-----WKSLARQ 92 (201)
Q Consensus 30 ~p~a~~LaTvd~~g~p~~R~V~lr~~------~~~g~~f~Tn~~------S~K~~~l~~np~~al~f~-----w~~~~rQ 92 (201)
T Consensus 11 ~arva~LAT~~~~G~PhlvPv~FA~~~~~~~~~~d~i~taVD~KPK~t~~LRRL~NI~~nP~vsLLvDhYddDWs~L-WW 89 (141)
T TIGR03668 11 QARVARLATVSPDGEPHLVPVVFAVGAGAVAAGDAVIYTAVDAKPKTTPRLRRLRNIEENPRVSLLVDRYDDDWTRL-WW 89 (141)
T ss_pred CCCEEEEEECCCCCCEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCEE-EE
T ss_conf 28448998607999564774899932566667798699832678787511022431344993699962257875302-69
Q ss_pred EEEEEEEECCCHH
Q ss_conf 9999875217637
Q gi|254781165|r 93 LRVRGLVEKYCDL 105 (201)
Q Consensus 93 iRi~G~~~~l~~~ 105 (201)
T Consensus 90 VRadG~A~v~~~g 102 (141)
T TIGR03668 90 VRADGRAEILRPG 102 (141)
T ss_pred EEECCEEEEECCC
T ss_conf 9825469981799