HHsearch alignment of GI: 254781165 and MMDB domain: 1vl7_A_
>1vl7_A (A:) Hypothetical protein ALR5027; 17134165, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.50A {Nostoc SP}
Probab=99.71 E-value=7.2e-18 Score=123.22 Aligned_cols=139 Identities=14% Similarity=0.129 Sum_probs=109.5
Q ss_pred CCHHHHHHHHHHHHHHCC--CCCCCEEEEEEECCCCCEEEEEEEHHEEECCEEEEEECCCCCCHHHHHCCCCEEEEEECC
Q ss_conf 697999999999999858--889557999858599877322101300003305899517852012231189479997366
Q gi|254781165|r 10 DVVFTLLSQWMQEAQSSE--SHDPHAVVLATADRMGFPNARVVLIKHFDQEGFVFYTNSQSPKGKEILENPKASLCFHWK 87 (201)
Q Consensus 10 ~~P~~lf~~W~~~A~~~~--~~~p~a~~LaTvd~~g~p~~R~V~lr~~~~~g~~f~Tn~~S~K~~~l~~np~~al~f~w~ 87 (201)
.+|......|-..+.+.. ....+.++|||++.+|.|.++.|.+...++..++|+|+..|+|+++|+.||+|+++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~LaT~~~dG~P~~~~v~~~~~~~~~l~f~t~~~s~k~~~l~~np~vsl~~~~~ 86 (157)
T 1vl7_A 7 HHHHHHMSQLEKAQAEYAGFIQEFQSAIISTISEQGIPNGSYAPFVIDDAKNIYIYVSGLAVHTKNIEANPLVNVLFVDD 86 (157)
T ss_dssp ----------------CHHHHTTCSEEEEEEECTTSCEEEEEEEEEECTTCCEEEEECTTSHHHHHHHHCCEEEEEEECC
T ss_pred CHHHHCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEEEEECCCCCEEEEECCHHHHHHHHHHCCCEEEEEEEC
T ss_conf 02011221678999999999986886999984799988899998798299938999852268789998599648999834
Q ss_pred CC-------EEEEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCE
Q ss_conf 64-------08999998752176378889752388333502662177656787777888888888750578877979732
Q gi|254781165|r 88 SL-------ARQLRVRGLVEKYCDLASDHYYASRPRESKIGAWASKQSQKMPSLDDLQKSVQRYSSFYQEKEIPRPVWWH 160 (201)
Q Consensus 88 ~~-------~rQiRi~G~~~~l~~~~~d~yf~~Rp~~sqi~a~~s~QS~~i~s~~~l~~~~~~~~~~~~~~~ip~P~~w~ 160 (201)
.. .++|+|.|+|+.+++++....+..+...++.. ... ...+.++.++
T Consensus 87 ~~~~~~~~~~~~v~i~G~a~~~~~~~~~~~~~~~~~~~~~~---------------------~~~-----~~~~~~~~~~ 140 (157)
T 1vl7_A 87 EAKTNQIFARRRLSFDCTATLIERESQKWNQVVDQFQERFG---------------------QII-----EVLRGLADFR 140 (157)
T ss_dssp GGGCSSGGGCCEEEEEEEEEEECTTSHHHHHHHHHHHHHHT---------------------HHH-----HHHHHHSCCE
T ss_pred CCCCCCHHHCEEEEEEEEEEECCCCHHHHHHHHHHHHHHCC---------------------HHH-----HHHCCCCCCE
T ss_conf 78744400001288988888516632778999877666332---------------------567-----7751568818
Q ss_pred EEEEEEEEEEECCC
Q ss_conf 79997007996137
Q gi|254781165|r 161 GFRICPLSIEFWSE 174 (201)
Q Consensus 161 g~~i~P~~iEFw~~ 174 (201)
+|+|.|++++||.+
T Consensus 141 ~~ri~p~~~~~~~~ 154 (157)
T 1vl7_A 141 IFQLTPKEGRFVIG 154 (157)
T ss_dssp EEEEEEEEEEEECS
T ss_pred EEEEEEEEEEEECC
T ss_conf 99999819999784