HHsearch results for GI: 254781165 and protein with PDBid: 1rfe_A
>1rfe_A Hypothetical protein RV2991; structural genomics, TB, FMN binding, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis H37RV} SCOP: b.45.1.1
Probab=99.39 E-value=5.7e-12 Score=88.15 Aligned_cols=126 Identities=17% Similarity=0.154 Sum_probs=85.3
Q ss_pred CCEEEEEEECCCCCEEEEEEEHHEEECCEEEEEECCCCCCHHHHHCCCCEEEEEECC---CCEEEEEEEEEEECCCHHHH
Q ss_conf 557999858599877322101300003305899517852012231189479997366---64089999987521763788
Q gi|254781165|r 31 PHAVVLATADRMGFPNARVVLIKHFDQEGFVFYTNSQSPKGKEILENPKASLCFHWK---SLARQLRVRGLVEKYCDLAS 107 (201)
Q Consensus 31 p~a~~LaTvd~~g~p~~R~V~lr~~~~~g~~f~Tn~~S~K~~~l~~np~~al~f~w~---~~~rQiRi~G~~~~l~~~~~ 107 (201)
.+.|.|||++.||.|.++.|.+ .++++.|.|+|...|+|.++|..||+|++++... ...++|.|+|+|+.+.+.+.
T Consensus 22 ~~~~~LaT~~~dG~P~~~pv~~-~~~~~~l~~~t~~~~~K~~~l~~np~vsl~v~~~~~~~~~~~V~v~G~aeiv~d~~~ 100 (162)
T 1rfe_A 22 SRTGTLATIGPDGQPHLTAMWY-AVIDGEIWLETKAKSQKAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEA 100 (162)
T ss_dssp CCCEEEEEECTTSCEEEEEECC-EEETTEEEEEEETTSHHHHHHHHCCEEEEEEEECSSGGGCEEEEEEEEEEEECCHHH
T ss_pred CCEEEEEEECCCCCEEEEEEEE-EECCCEEEEECCCCCEEEHHHCCCCEEEEEEECCCCCCCEEEEEEEEEEEEECCHHH
T ss_conf 9989999999999999999999-982889999816877261232569879999972887767158999999999789899
Q ss_pred HHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCC
Q ss_conf 89752388333502662177656787777888888888750578877979732799970079961378986
Q gi|254781165|r 108 DHYYASRPRESKIGAWASKQSQKMPSLDDLQKSVQRYSSFYQEKEIPRPVWWHGFRICPLSIEFWSERPYR 178 (201)
Q Consensus 108 d~yf~~Rp~~sqi~a~~s~QS~~i~s~~~l~~~~~~~~~~~~~~~ip~P~~w~g~~i~P~~iEFw~~~~~r 178 (201)
...+... ...+-... ..+......+. ..+.-..|+|.|.+|.+|..+.-+
T Consensus 101 ~~~~~~~--------~~~ry~~~--~~~~~~~~~~~-----------~~~~~~~~ri~p~~i~~wD~~k~~ 150 (162)
T 1rfe_A 101 LHRVGVS--------VWERYTGP--YTDECKPMVDQ-----------MMNKRVGVRIVARRTRSWDHRKLG 150 (162)
T ss_dssp HHHHHHH--------HHHHHTCC--CCGGGHHHHHH-----------HTTTEEEEEEEEEEEEEEEGGGGC
T ss_pred HHHHHHH--------HHHHHCCC--CCCHHHHHHHC-----------CCCCEEEEEEEEEEEEEEECCCCC
T ss_conf 9999999--------99986587--82012346655-----------579989999999999998045566