HHsearch results for GI: 254781165 and protein with PDBid: 1rfe_A

>1rfe_A Hypothetical protein RV2991; structural genomics, TB, FMN binding, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis H37RV} SCOP: b.45.1.1
Probab=99.39  E-value=5.7e-12  Score=88.15  Aligned_cols=126  Identities=17%  Similarity=0.154  Sum_probs=85.3

Q ss_pred             CCEEEEEEECCCCCEEEEEEEHHEEECCEEEEEECCCCCCHHHHHCCCCEEEEEECC---CCEEEEEEEEEEECCCHHHH
Q ss_conf             557999858599877322101300003305899517852012231189479997366---64089999987521763788
Q gi|254781165|r   31 PHAVVLATADRMGFPNARVVLIKHFDQEGFVFYTNSQSPKGKEILENPKASLCFHWK---SLARQLRVRGLVEKYCDLAS  107 (201)
Q Consensus        31 p~a~~LaTvd~~g~p~~R~V~lr~~~~~g~~f~Tn~~S~K~~~l~~np~~al~f~w~---~~~rQiRi~G~~~~l~~~~~  107 (201)
                      .+.|.|||++.||.|.++.|.+ .++++.|.|+|...|+|.++|..||+|++++...   ...++|.|+|+|+.+.+.+.
T Consensus        22 ~~~~~LaT~~~dG~P~~~pv~~-~~~~~~l~~~t~~~~~K~~~l~~np~vsl~v~~~~~~~~~~~V~v~G~aeiv~d~~~  100 (162)
T 1rfe_A           22 SRTGTLATIGPDGQPHLTAMWY-AVIDGEIWLETKAKSQKAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEA  100 (162)
T ss_dssp             CCCEEEEEECTTSCEEEEEECC-EEETTEEEEEEETTSHHHHHHHHCCEEEEEEEECSSGGGCEEEEEEEEEEEECCHHH
T ss_pred             CCEEEEEEECCCCCEEEEEEEE-EECCCEEEEECCCCCEEEHHHCCCCEEEEEEECCCCCCCEEEEEEEEEEEEECCHHH
T ss_conf             9989999999999999999999-982889999816877261232569879999972887767158999999999789899


Q ss_pred             HHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCC
Q ss_conf             89752388333502662177656787777888888888750578877979732799970079961378986
Q gi|254781165|r  108 DHYYASRPRESKIGAWASKQSQKMPSLDDLQKSVQRYSSFYQEKEIPRPVWWHGFRICPLSIEFWSERPYR  178 (201)
Q Consensus       108 d~yf~~Rp~~sqi~a~~s~QS~~i~s~~~l~~~~~~~~~~~~~~~ip~P~~w~g~~i~P~~iEFw~~~~~r  178 (201)
                      ...+...        ...+-...  ..+......+.           ..+.-..|+|.|.+|.+|..+.-+
T Consensus       101 ~~~~~~~--------~~~ry~~~--~~~~~~~~~~~-----------~~~~~~~~ri~p~~i~~wD~~k~~  150 (162)
T 1rfe_A          101 LHRVGVS--------VWERYTGP--YTDECKPMVDQ-----------MMNKRVGVRIVARRTRSWDHRKLG  150 (162)
T ss_dssp             HHHHHHH--------HHHHHTCC--CCGGGHHHHHH-----------HTTTEEEEEEEEEEEEEEEGGGGC
T ss_pred             HHHHHHH--------HHHHHCCC--CCCHHHHHHHC-----------CCCCEEEEEEEEEEEEEEECCCCC
T ss_conf             9999999--------99986587--82012346655-----------579989999999999998045566