HHsearch results for GI: 254781165 and protein with PDBid: 2ig6_A
>2ig6_A NIMC/NIMA family protein; NP_349178.1, structural genomics, PSI-2, protein structure initiative, joint center for structural genomics; HET: FMN; 1.80A {Clostridium acetobutylicum}
Probab=99.66 E-value=1.1e-15 Score=109.62 Aligned_cols=112 Identities=15% Similarity=0.080 Sum_probs=89.4
Q ss_pred CCCEEEEEEECCCCCEEEEEEEHHEEECCEEEEEECCCCCCHHHHHCCCCEEEEEECCCCEEEEEEEEEEECCCHH-HHH
Q ss_conf 9557999858599877322101300003305899517852012231189479997366640899999875217637-888
Q gi|254781165|r 30 DPHAVVLATADRMGFPNARVVLIKHFDQEGFVFYTNSQSPKGKEILENPKASLCFHWKSLARQLRVRGLVEKYCDL-ASD 108 (201)
Q Consensus 30 ~p~a~~LaTvd~~g~p~~R~V~lr~~~~~g~~f~Tn~~S~K~~~l~~np~~al~f~w~~~~rQiRi~G~~~~l~~~-~~d 108 (201)
+-..+.|||++ +|.|++|.|.+...++..+.|+|+..|+|.++|..||+|++||+++. .++|||.|+|+.+.+. ..+
T Consensus 29 ~~~~~~LATv~-~g~P~vrpm~~~~~d~~~iyF~T~~~s~K~~~L~~Np~Vsl~~~~~~-~~~v~i~G~a~~v~d~e~k~ 106 (150)
T 2ig6_A 29 ECGVFYLATNE-GDQPRVRPFGAVFEYEGKLYIVSNNTKKCFKQMIQNPKVEISGMNKK-GQWIRLTGEVANDDRREVKE 106 (150)
T ss_dssp HHCSEEEEEEE-TTEEEEEEECCCEEETTEEEEEEETTSHHHHHHHHCCEEEEEEECTT-SCEEEEEEEEEECCCHHHHH
T ss_pred HCCEEEEEECC-CCCEEEEEEEEEEECCCEEEEEECCCCHHHHHHHCCCCEEEEEECCC-CCEEEEEEEEEEECCHHHHH
T ss_conf 59979999914-99599999999998799999995588889998520785899998399-86999988999958999999
Q ss_pred HHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCC
Q ss_conf 975238833350266217765678777788888888875057887797973279997007996137
Q gi|254781165|r 109 HYYASRPRESKIGAWASKQSQKMPSLDDLQKSVQRYSSFYQEKEIPRPVWWHGFRICPLSIEFWSE 174 (201)
Q Consensus 109 ~yf~~Rp~~sqi~a~~s~QS~~i~s~~~l~~~~~~~~~~~~~~~ip~P~~w~g~~i~P~~iEFw~~ 174 (201)
++|..+|... ..|.. + .+.+..|+|.|...+||-.
T Consensus 107 ~~~~~~p~l~---------------------------~~y~~-d---dp~~~v~~l~~~~a~~~d~ 141 (150)
T 2ig6_A 107 LALEAVPSLK---------------------------NMYSV-D---DGIFAVLYFTKGEGTICSF 141 (150)
T ss_dssp HHHHHSGGGG---------------------------GTCCT-T---SSCEEEEEEEEEEEEEECS
T ss_pred HHHHHCHHHH---------------------------CCCCC-C---CCCEEEEEEECCEEEEECC
T ss_conf 9988597873---------------------------74689-9---9989999999689999828