Query gi|254781165|ref|YP_003065578.1| pyridoxamine 5'-phosphate oxidase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 201
No_of_seqs 134 out of 1850
Neff 6.0
Searched_HMMs 13730
Date Wed Jun 1 11:41:24 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254781165.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1nrga_ b.45.1.1 (A:) Pyridoxi 100.0 0 0 458.3 22.3 197 5-201 3-213 (213)
2 d1dnla_ b.45.1.1 (A:) Pyridoxi 100.0 0 0 446.2 20.9 191 9-201 9-199 (199)
3 d1ci0a_ b.45.1.1 (A:) Pyridoxi 100.0 0 0 437.8 20.5 193 9-201 9-205 (205)
4 d2a2ja1 b.45.1.1 (A:24-224) Py 100.0 0 0 440.5 18.0 190 5-201 11-201 (201)
5 d1t9ma_ b.45.1.1 (A:) Pyridoxi 100.0 0 0 426.6 21.0 193 5-201 12-204 (204)
6 d2fhqa1 b.45.1.1 (A:3-137) Put 99.8 1.9E-20 1.4E-24 135.9 11.5 130 20-183 4-135 (135)
7 d2hq7a1 b.45.1.1 (A:2-142) Hyp 99.8 1.8E-20 1.3E-24 136.1 10.7 128 18-177 4-133 (141)
8 d2i02a1 b.45.1.1 (A:5-147) Gen 99.8 1.1E-19 7.8E-24 131.6 12.8 127 28-185 14-143 (143)
9 d1rfea_ b.45.1.1 (A:) Hypothet 99.4 2E-12 1.5E-16 89.4 12.2 126 31-178 21-149 (160)
10 d1w9aa_ b.45.1.1 (A:) Hypothet 99.4 5.7E-13 4.2E-17 92.6 6.8 84 23-106 4-88 (142)
11 d2asfa1 b.45.1.1 (A:11-135) Hy 99.3 1.3E-11 9.2E-16 84.8 12.6 113 27-172 7-120 (125)
12 d2fg9a1 b.45.1.1 (A:1-157) 5-n 99.1 4.1E-10 3E-14 76.0 11.8 75 30-105 18-107 (157)
13 d1flma_ b.45.1.1 (A:) FMN-bind 99.1 1.9E-10 1.4E-14 78.0 9.9 78 29-107 11-97 (122)
14 d1vl7a_ b.45.1.1 (A:) Hypothet 99.0 2.4E-09 1.7E-13 71.6 10.6 75 30-105 7-89 (135)
15 d2htia1 b.45.1.1 (A:10-165) Hy 98.7 7.1E-08 5.1E-12 63.1 10.9 75 30-106 14-101 (156)
16 d2hq9a1 b.45.1.1 (A:1-148) Hyp 98.6 3.9E-07 2.9E-11 58.7 12.1 73 30-105 17-92 (148)
17 d2arza1 b.45.1.1 (A:2-239) Hyp 98.3 1.4E-05 1E-09 49.7 13.8 87 31-118 15-113 (238)
18 d2fura1 b.45.1.1 (A:16-208) Hy 97.9 3.4E-05 2.5E-09 47.5 8.7 75 30-106 15-102 (193)
19 d2vpaa1 b.45.1.1 (A:2-195) Nim 97.4 0.00029 2.1E-08 42.1 7.8 76 31-106 33-126 (194)
20 d1xhna1 b.45.1.1 (A:13-182) Ce 97.3 0.00093 6.8E-08 39.2 8.8 114 31-174 18-154 (170)
21 d2imja1 d.17.4.23 (A:5-159) Hy 78.0 1.9 0.00014 19.9 5.9 79 105-197 20-103 (155)
22 d1uv7a_ d.67.4.1 (A:) General 59.5 5 0.00036 17.6 3.9 44 10-53 34-78 (80)
23 d2ptfa1 b.45.1.4 (A:15-220) Un 45.1 8.5 0.00062 16.2 5.3 54 33-86 21-74 (206)
24 d2imla1 b.45.1.4 (A:1-189) Hyp 32.4 14 0.001 15.0 5.3 53 34-86 15-68 (189)
25 d1wiia_ g.41.3.4 (A:) Hypothet 23.2 20 0.0015 14.1 2.4 20 8-27 63-82 (85)
No 1
>d1nrga_ b.45.1.1 (A:) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=0 Score=458.29 Aligned_cols=197 Identities=38% Similarity=0.684 Sum_probs=188.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHHC-CCCCCCEEEEEEECCCCCEEEEEEEHHEEECCEEEEEECCCCCCHHHHHCCCCEEEE
Q ss_conf 8898769799999999999985-888955799985859987732210130000330589951785201223118947999
Q gi|254781165|r 5 VPINNDVVFTLLSQWMQEAQSS-ESHDPHAVVLATADRMGFPNARVVLIKHFDQEGFVFYTNSQSPKGKEILENPKASLC 83 (201)
Q Consensus 5 ~~~~~~~P~~lf~~W~~~A~~~-~~~~p~a~~LaTvd~~g~p~~R~V~lr~~~~~g~~f~Tn~~S~K~~~l~~np~~al~ 83 (201)
-.+...||+++|+.||++|.+. ++.+|+||||||||.+|.|++|||+||+|+++||+||||++|+|+++|+.||+||++
T Consensus 3 ~~~~~~dP~~~F~~W~~eA~~~~~~~ep~am~LATvd~~G~P~~R~Vllk~i~~~g~~FfTn~~S~K~~el~~Np~aal~ 82 (213)
T d1nrga_ 3 THLTSLDPVKQFAAWFEEAVQCPDIGEANAMCLATCTRDGKPSARMLLLKGFGKDGFRFFTNFESRKGKELDSNPFASLV 82 (213)
T ss_dssp SSCSCSSHHHHHHHHHHHHHHCTTCSCTTEEEEEEECTTSCEEEEEEECCCEETTEEEEEEETTSHHHHHHHHSCEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEEEHHHCCCEEEEECCCCHHHHHHHCCCCEEEE
T ss_conf 55677898999999999999759999851789999878897777777400210352489965675322313128815999
Q ss_pred EECCCCEEEEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
Q ss_conf 73666408999998752176378889752388333502662177656787777888888888750578877979732799
Q gi|254781165|r 84 FHWKSLARQLRVRGLVEKYCDLASDHYYASRPRESKIGAWASKQSQKMPSLDDLQKSVQRYSSFYQEKEIPRPVWWHGFR 163 (201)
Q Consensus 84 f~w~~~~rQiRi~G~~~~l~~~~~d~yf~~Rp~~sqi~a~~s~QS~~i~s~~~l~~~~~~~~~~~~~~~ip~P~~w~g~~ 163 (201)
|||++++|||||+|+|++++++++++||++||++|||+||+|+||++|++++.|+++++++++++.+++||||++||||+
T Consensus 83 f~W~~l~RQvRi~G~~~~l~~~~~~~yf~~Rp~~sqi~a~~s~QS~~i~~~~~l~~~~~~~~~~~~~~~vp~P~~w~Gy~ 162 (213)
T d1nrga_ 83 FYWEPLNRQVRVEGPVKKLPEEEAECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQDQEVPKPKSWGGYV 162 (213)
T ss_dssp EEEGGGTEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHCCTTSCCSCHHHHHHHHHHHHHHTTTSCCCCCTTEEEEE
T ss_pred EECHHHHEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
T ss_conf 85004413435667643055276667886489655432430466677887899999999889870589988888515999
Q ss_pred EEEEEEEECCCCCCCCCEEEEEEEE-------------CCCCCEEEEECCC
Q ss_conf 9700799613789864026999881-------------5899707996289
Q gi|254781165|r 164 ICPLSIEFWSERPYRLHDRLLFSRE-------------TIAGKWTQFLLYP 201 (201)
Q Consensus 164 i~P~~iEFw~~~~~rlHdR~~y~~~-------------~~~~~W~~~~L~P 201 (201)
|.|++|||||++++|||||++|+|. ..+++|.++||+|
T Consensus 163 l~P~~iEFwq~~~~RlHdR~~y~R~~~~~~~~~~~~~~~~~~~W~~~rL~P 213 (213)
T d1nrga_ 163 LYPQVMEFWQGQTNRLHDRIVFRRGLPTGDSPLGPMTHRGEEDWLYERLAP 213 (213)
T ss_dssp ECCSEEEEEECCTTSCCEEEEEEECSSTTSCCCCTTCEECSTTEEEEECCC
T ss_pred EECCEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECC
T ss_conf 860599974799987576899994487665544322445689826998169
No 2
>d1dnla_ b.45.1.1 (A:) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=0 Score=446.19 Aligned_cols=191 Identities=41% Similarity=0.750 Sum_probs=186.9
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEHHEEECCEEEEEECCCCCCHHHHHCCCCEEEEEECCC
Q ss_conf 76979999999999998588895579998585998773221013000033058995178520122311894799973666
Q gi|254781165|r 9 NDVVFTLLSQWMQEAQSSESHDPHAVVLATADRMGFPNARVVLIKHFDQEGFVFYTNSQSPKGKEILENPKASLCFHWKS 88 (201)
Q Consensus 9 ~~~P~~lf~~W~~~A~~~~~~~p~a~~LaTvd~~g~p~~R~V~lr~~~~~g~~f~Tn~~S~K~~~l~~np~~al~f~w~~ 88 (201)
+++|+++|+.||++|+++++.+|+||+|||||.+|.|++||||||+++++||+||||++|+|++||+.||+||+||||++
T Consensus 9 ~~~P~~~f~~w~~~A~~~~~~~p~A~~LATvd~~g~P~~RtV~lr~~~~~g~~F~Tn~~S~K~~el~~Np~asl~f~w~~ 88 (199)
T d1dnla_ 9 PADPLTLFERWLSQACEAKLADPTAMVVATVDEHGQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLLFPWHT 88 (199)
T ss_dssp CSSHHHHHHHHHHHHHHTTCSCTTEEEEEEECTTSCEEEEEEECCEEETTEEEEEEETTSHHHHHHHHCCEEEEEECCGG
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEECCEEEHHHCCCCCEEEEECCCCHHHHHHHCCCCEEEEEEECC
T ss_conf 97989999999999997699998778999887999870012432023168449992562054566642895179996140
Q ss_pred CEEEEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEE
Q ss_conf 40899999875217637888975238833350266217765678777788888888875057887797973279997007
Q gi|254781165|r 89 LARQLRVRGLVEKYCDLASDHYYASRPRESKIGAWASKQSQKMPSLDDLQKSVQRYSSFYQEKEIPRPVWWHGFRICPLS 168 (201)
Q Consensus 89 ~~rQiRi~G~~~~l~~~~~d~yf~~Rp~~sqi~a~~s~QS~~i~s~~~l~~~~~~~~~~~~~~~ip~P~~w~g~~i~P~~ 168 (201)
++|||||+|+|++++++++++||++||+.+|++||+|+||++|++++.|+++++++.+++.++++|+|++||||+|.|++
T Consensus 89 ~~rQiRi~G~~~~~~~~~sd~~f~~rp~~sqi~a~~s~Qs~~i~~~~~l~~~~~~~~~~~~~~~~p~p~~w~g~~l~P~~ 168 (199)
T d1dnla_ 89 LERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQGEVPLPSFWGGFRVSLEQ 168 (199)
T ss_dssp GTEEEEEEEEEEECCHHHHHHHHTTSCHHHHHHHHHCCTTSCCSCTHHHHHHHHHHHHHSTTSSCCCCTTEEEEEECCSE
T ss_pred HHEEEEEEEEEEECCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCE
T ss_conf 10343777776652517777675326701101021044335566489999999998753356789999724899986369
Q ss_pred EEECCCCCCCCCEEEEEEEECCCCCEEEEECCC
Q ss_conf 996137898640269998815899707996289
Q gi|254781165|r 169 IEFWSERPYRLHDRLLFSRETIAGKWTQFLLYP 201 (201)
Q Consensus 169 iEFw~~~~~rlHdR~~y~~~~~~~~W~~~~L~P 201 (201)
||||+++++|+|+|++|+++ +++|.+++|+|
T Consensus 169 iEfw~~~~~rlH~R~~y~~~--~~~W~~~~L~P 199 (199)
T d1dnla_ 169 IEFWQGGEHRLHDRFLYQRE--NDAWKIDRLAP 199 (199)
T ss_dssp EEEEECCGGGCCEEEEEEEC--SSSEEEEECCC
T ss_pred EEEECCCCCCCEEEEEEEEC--CCCEEEEEECC
T ss_conf 99707999887337999975--99677999469
No 3
>d1ci0a_ b.45.1.1 (A:) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=0 Score=437.84 Aligned_cols=193 Identities=39% Similarity=0.776 Sum_probs=184.7
Q ss_pred CCCHHHHHHHHHHHHHHCC-CCCCCEEEEEEEC-CCCCEEEEEEEHHEEECCEEEEEECC-CCCCHHHHHCCCCEEEEEE
Q ss_conf 7697999999999999858-8895579998585-99877322101300003305899517-8520122311894799973
Q gi|254781165|r 9 NDVVFTLLSQWMQEAQSSE-SHDPHAVVLATAD-RMGFPNARVVLIKHFDQEGFVFYTNS-QSPKGKEILENPKASLCFH 85 (201)
Q Consensus 9 ~~~P~~lf~~W~~~A~~~~-~~~p~a~~LaTvd-~~g~p~~R~V~lr~~~~~g~~f~Tn~-~S~K~~~l~~np~~al~f~ 85 (201)
++||+++|+.||++|.+.+ ..+|+|||||||| .+|.|++||||||+++++||+||||+ +|+|++||+.||+||+|||
T Consensus 9 ~~~P~~~f~~W~~~A~~~~~~~~p~a~~LATvd~~~G~P~~RtVllr~~~~~g~~fftn~~~S~K~~el~~Np~asl~f~ 88 (205)
T d1ci0a_ 9 TDDPIDLFTKWFNEAKEDPRETLPEAITFSSAELPSGRVSSRILLFKELDHRGFTIYSNWGTSRKAHDIATNPNAAIVFF 88 (205)
T ss_dssp CSSHHHHHHHHHHHHHHCSSCSCTTEEEEEEEETTTTEEEEEEEECCEECSSSEEEEEECSSSHHHHHHHHCCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCEEEEEE
T ss_conf 98989999999999985488888614799975267896514667787630451899974566725554303883589982
Q ss_pred CCCCEEEEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCC-CCCCCCCCCCEEEEE
Q ss_conf 6664089999987521763788897523883335026621776567877778888888887505-788779797327999
Q gi|254781165|r 86 WKSLARQLRVRGLVEKYCDLASDHYYASRPRESKIGAWASKQSQKMPSLDDLQKSVQRYSSFYQ-EKEIPRPVWWHGFRI 164 (201)
Q Consensus 86 w~~~~rQiRi~G~~~~l~~~~~d~yf~~Rp~~sqi~a~~s~QS~~i~s~~~l~~~~~~~~~~~~-~~~ip~P~~w~g~~i 164 (201)
|++++|||||+|.|++++++++|+||++||++|||+||+|+||++|.+++.|+++.+++.+++. ++++|||++||||+|
T Consensus 89 w~~~~rQvRI~G~~~~~~~~~sd~yf~~rp~~sqi~a~~s~qs~~~~~~~~l~~~~~~~~~~~~~~~~~p~P~~wgg~~l 168 (205)
T d1ci0a_ 89 WKDLQRQVRVEGITEHVNRETSERYFKTRPRGSKIGAWASRQSDVIKNREELDELTQKNTERFKDAEDIPCPDYWGGLRI 168 (205)
T ss_dssp ETTTTEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHCCTTCEESCHHHHHHHHHHHHHHTTSCSSCCCCTTEEEEEE
T ss_pred CHHHEEEEEEEEEEECCCHHHHHHHHHCCCHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
T ss_conf 21440344577754407878888988618753162121155323234114577889999987410357889981389998
Q ss_pred EEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEECCC
Q ss_conf 7007996137898640269998815899707996289
Q gi|254781165|r 165 CPLSIEFWSERPYRLHDRLLFSRETIAGKWTQFLLYP 201 (201)
Q Consensus 165 ~P~~iEFw~~~~~rlHdR~~y~~~~~~~~W~~~~L~P 201 (201)
.|++|||||++++|+|+|++|++...+++|.+++|+|
T Consensus 169 ~P~~iEFwq~~~~rlH~R~~y~r~~~~~~W~~~~L~P 205 (205)
T d1ci0a_ 169 VPLEIEFWQGRPSRLHDRFVYRRKTENDPWKVVRLAP 205 (205)
T ss_dssp EEEEEEEEECCTTSCCEEEEEECSSTTSCCEEEEECC
T ss_pred ECCEEEEECCCCCCCEEEEEEEECCCCCCEEEEEECC
T ss_conf 6049997069998775489999748999667999559
No 4
>d2a2ja1 b.45.1.1 (A:24-224) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00 E-value=0 Score=440.55 Aligned_cols=190 Identities=36% Similarity=0.615 Sum_probs=182.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEHHEEECCEEEEEECCCCCCHHHHHCCCCEEEEE
Q ss_conf 88987697999999999999858889557999858599877322101300003305899517852012231189479997
Q gi|254781165|r 5 VPINNDVVFTLLSQWMQEAQSSESHDPHAVVLATADRMGFPNARVVLIKHFDQEGFVFYTNSQSPKGKEILENPKASLCF 84 (201)
Q Consensus 5 ~~~~~~~P~~lf~~W~~~A~~~~~~~p~a~~LaTvd~~g~p~~R~V~lr~~~~~g~~f~Tn~~S~K~~~l~~np~~al~f 84 (201)
...-.++|+++|+.||++|+++++.+||||+||||+ +|.|++|||+||+|+++||+||||++|+|+++|+.||+||++|
T Consensus 11 ~~~l~~~pi~lf~~W~~eA~~~~~~ep~a~~LaTv~-~g~P~~R~VlLk~i~~~g~~F~Tn~~S~K~~~l~~Np~vsl~f 89 (201)
T d2a2ja1 11 FDWLDDGWLTLLRRWLNDAQRAGVSEPNAMVLATVA-DGKPVTRSVLCKILDESGVAFFTSYTSAKGEQLAVTPYASATF 89 (201)
T ss_dssp GGGGTTHHHHHHHHHHHHHHHTTCSSTTEEEEEEEE-TTEEEEEEEEEEEEETTEEEEEEETTSHHHHHHHHSCEEEEEE
T ss_pred HHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEC-CCCEEEEEEEHHHEECCCEEEEECCCCHHHHHHCCCCCEEEEE
T ss_conf 677599989999999999997699996677999833-8954311788534122506999347864243321377237998
Q ss_pred ECCCCEEEEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCCCCCEEEE
Q ss_conf 3666408999998752176378889752388333502662177656787777888888888750578-877979732799
Q gi|254781165|r 85 HWKSLARQLRVRGLVEKYCDLASDHYYASRPRESKIGAWASKQSQKMPSLDDLQKSVQRYSSFYQEK-EIPRPVWWHGFR 163 (201)
Q Consensus 85 ~w~~~~rQiRi~G~~~~l~~~~~d~yf~~Rp~~sqi~a~~s~QS~~i~s~~~l~~~~~~~~~~~~~~-~ip~P~~w~g~~ 163 (201)
||++++|||||+|+|++++++++++||++||+++||+||+|+||++|++++.|+++++++.+++.++ +||||++||||+
T Consensus 90 ~w~~~~rQvRI~G~a~~l~~~~s~~yf~~Rp~~sqi~a~~s~QS~~i~~~~~l~~~~~~~~~~~~~~~~ip~P~~w~g~~ 169 (201)
T d2a2ja1 90 PWYQLGRQAHVQGPVSKVSTEEIFTYWSMRPRGAQLGAWASQQSRPVGSRAQLDNQLAEVTRRFADQDQIPVPPGWGGYR 169 (201)
T ss_dssp EEGGGTEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHSCTTCCCCCSHHHHHHHHHHHHHHTTCSSCCCCTTEEEEE
T ss_pred ECHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
T ss_conf 34167667878877763133777888760673444324432555666316666556666777516888777999608999
Q ss_pred EEEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEECCC
Q ss_conf 97007996137898640269998815899707996289
Q gi|254781165|r 164 ICPLSIEFWSERPYRLHDRLLFSRETIAGKWTQFLLYP 201 (201)
Q Consensus 164 i~P~~iEFw~~~~~rlHdR~~y~~~~~~~~W~~~~L~P 201 (201)
|.|++|||||++++|||||++|. .|.++||+|
T Consensus 170 l~P~~iEFWq~~~~RlHdR~~y~------~w~~~rL~P 201 (201)
T d2a2ja1 170 IAPEIVEFWQGRENRMHNRIRVA------NGRLERLQP 201 (201)
T ss_dssp ECCSEEEEEECCTTSCCEEEEEE------TTEEEECCT
T ss_pred EEEEEEEECCCCCCCCEEEEEEC------CCCEEECCC
T ss_conf 97029997489998867379975------983897188
No 5
>d1t9ma_ b.45.1.1 (A:) Pyridoxine 5'-phoshate oxidase (PNP oxidase) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=100.00 E-value=0 Score=426.64 Aligned_cols=193 Identities=31% Similarity=0.583 Sum_probs=184.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEHHEEECCEEEEEECCCCCCHHHHHCCCCEEEEE
Q ss_conf 88987697999999999999858889557999858599877322101300003305899517852012231189479997
Q gi|254781165|r 5 VPINNDVVFTLLSQWMQEAQSSESHDPHAVVLATADRMGFPNARVVLIKHFDQEGFVFYTNSQSPKGKEILENPKASLCF 84 (201)
Q Consensus 5 ~~~~~~~P~~lf~~W~~~A~~~~~~~p~a~~LaTvd~~g~p~~R~V~lr~~~~~g~~f~Tn~~S~K~~~l~~np~~al~f 84 (201)
+...+++|+++|+.||++|.++++.+|+||||||||++|.|++||||||+++++||+||||++|+|+++|+.||+||+||
T Consensus 12 ~~~~p~~P~~~f~~W~~~a~~~~~~~p~a~~LATv~~dG~P~~RtVvLr~~~~~~~~f~T~~~S~K~~~l~~np~~sl~f 91 (204)
T d1t9ma_ 12 FEAPPANPMEVLRNWLERARRYGVREPRALALATVDGQGRPSTRIVVIAELGERGVVFATHADSQKGRELAQNPWASGVL 91 (204)
T ss_dssp TTSCCSSHHHHHHHHHHHHHHHTCSSTTEEEEEEECTTSCEEEEEEECCEECSSEEEEEEETTSHHHHHHHHCCEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHCEEEEEECCHHHHHHHHCCCCCEEEE
T ss_conf 22598799999999999999769999878999998799998233135777651060899702202234443155317998
Q ss_pred ECCCCEEEEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE
Q ss_conf 36664089999987521763788897523883335026621776567877778888888887505788779797327999
Q gi|254781165|r 85 HWKSLARQLRVRGLVEKYCDLASDHYYASRPRESKIGAWASKQSQKMPSLDDLQKSVQRYSSFYQEKEIPRPVWWHGFRI 164 (201)
Q Consensus 85 ~w~~~~rQiRi~G~~~~l~~~~~d~yf~~Rp~~sqi~a~~s~QS~~i~s~~~l~~~~~~~~~~~~~~~ip~P~~w~g~~i 164 (201)
||++++|||||+|+|++++++++++||++||+++|+++|+|+||++|++++.|+..++++.+ .++++|+|++||||.|
T Consensus 92 ~w~~~~rQvRi~G~~~~l~~~~~~~~~~~rp~~s~~~a~~s~qs~~i~~~~~l~~~~~~~~~--~~~~~p~p~~~~g~~l 169 (204)
T d1t9ma_ 92 YWRESSQQIILNGRAERLPDERADAQWLSRPYQTHPMSIASRQSETLADIHALRAEARRLAE--TDGPLPRPPGYCLFEL 169 (204)
T ss_dssp EETTTTEEEEEEEEEEECCHHHHHHHHHHSCGGGHHHHHHCCTTSBCSCHHHHHHHHHHHTT--SCSCCCCCTTEEEEEE
T ss_pred ECCCCEEEEEEEEEEEECCHHHHHHHHHCCCHHCCCCEEECCCCCCCCHHHHHHHHHHHHHH--CCCCCCCCCCEEEEEE
T ss_conf 60642089999998762557889888853840004544533765544204567888875210--1588999995689994
Q ss_pred EEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEECCC
Q ss_conf 7007996137898640269998815899707996289
Q gi|254781165|r 165 CPLSIEFWSERPYRLHDRLLFSRETIAGKWTQFLLYP 201 (201)
Q Consensus 165 ~P~~iEFw~~~~~rlHdR~~y~~~~~~~~W~~~~L~P 201 (201)
.|++||||+++++|+|+|++|.++ +++|.+++|+|
T Consensus 170 ~p~~iEfw~~~~~rlH~R~~y~~~--~~~W~~~~L~P 204 (204)
T d1t9ma_ 170 CLESVEFWGNGTERLHERLRYDRD--EGGWKHRYLQP 204 (204)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEC--SSSEEEEEECC
T ss_pred CCCEEEECCCCCCCCEEEEEEEEC--CCCEEEEEECC
T ss_conf 378899717999987789999964--99679999588
No 6
>d2fhqa1 b.45.1.1 (A:3-137) Putative general stress protein BT1439 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=99.83 E-value=1.9e-20 Score=135.94 Aligned_cols=130 Identities=21% Similarity=0.333 Sum_probs=102.2
Q ss_pred HHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEHHEEECCE-EEEEECCCCCCHHHHHCCCCEEEEEECCCCEEEEEEEEE
Q ss_conf 9999985888955799985859987732210130000330-589951785201223118947999736664089999987
Q gi|254781165|r 20 MQEAQSSESHDPHAVVLATADRMGFPNARVVLIKHFDQEG-FVFYTNSQSPKGKEILENPKASLCFHWKSLARQLRVRGL 98 (201)
Q Consensus 20 ~~~A~~~~~~~p~a~~LaTvd~~g~p~~R~V~lr~~~~~g-~~f~Tn~~S~K~~~l~~np~~al~f~w~~~~rQiRi~G~ 98 (201)
+++....-..+...|+|||++.+|.|++|.|.+...++++ +.|+|+..|+|.++|..||+|++||+.+ +++|+|.|+
T Consensus 4 l~e~~~~~l~~~~~~~laT~~~dG~P~~~p~~~~~~~~~~~i~f~t~~~s~k~~~i~~np~vsl~~~~~--~~~v~i~G~ 81 (135)
T d2fhqa1 4 MKEKAVELLQKCEVVTLASVNKEGYPRPVPMSKIAAEGISTIWMSTGADSLKTIDFLSNPKAGLCFQEK--GDSVALMGE 81 (135)
T ss_dssp HHHHHHHHHHTCSEEEEEEECTTSCEEEEEEECCEEETTTEEEEEEETTSHHHHHHHHCCEEEEEEEET--TEEEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEEEEECCCCEEEEEECCCCHHHHHHHCCCEEEEEEEEC--CCEEEEEEE
T ss_conf 789999998169979999997999998899899999789989999727976899875099399999948--998999999
Q ss_pred EECCCHHH-HHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCCC
Q ss_conf 52176378-88975238833350266217765678777788888888875057887797973279997007996137898
Q gi|254781165|r 99 VEKYCDLA-SDHYYASRPRESKIGAWASKQSQKMPSLDDLQKSVQRYSSFYQEKEIPRPVWWHGFRICPLSIEFWSERPY 177 (201)
Q Consensus 99 ~~~l~~~~-~d~yf~~Rp~~sqi~a~~s~QS~~i~s~~~l~~~~~~~~~~~~~~~ip~P~~w~g~~i~P~~iEFw~~~~~ 177 (201)
|+.+.+.+ .+++|+.. +...+++++ ..+.++.++|.|+++|||.+++.
T Consensus 82 a~i~~d~~~~~~~w~~~-----------------------------~~~~~~~g~--~dp~~~viri~p~~~~~W~~g~~ 130 (135)
T d2fhqa1 82 VEVVTDEKLKQELWQDW-----------------------------FIEHFPGGP--TDPGYVLLKFTANHATYWIEGTF 130 (135)
T ss_dssp EEEECCHHHHHHSCCGG-----------------------------GGGTCTTCT--TCTTEEEEEEEEEEEEEEETTEE
T ss_pred EEEEECHHHHHHHHHHH-----------------------------HHHHCCCCC--CCCCEEEEEEEEEEEEEECCCCC
T ss_conf 99995779999999999-----------------------------997657899--99979999999729999769973
Q ss_pred CCCEEE
Q ss_conf 640269
Q gi|254781165|r 178 RLHDRL 183 (201)
Q Consensus 178 rlHdR~ 183 (201)
+|+|+
T Consensus 131 -~~~~~ 135 (135)
T d2fhqa1 131 -IHKKL 135 (135)
T ss_dssp -EEEEC
T ss_pred -CCCCC
T ss_conf -55479
No 7
>d2hq7a1 b.45.1.1 (A:2-142) Hypotheical protein CAC3491 {Clostridium acetobutylicum [TaxId: 1488]}
Probab=99.83 E-value=1.8e-20 Score=136.10 Aligned_cols=128 Identities=16% Similarity=0.198 Sum_probs=101.5
Q ss_pred HHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEHHEEECCE-EEEEECCCCCCHHHHHCCCCEEEEEECCCCEEEEEEE
Q ss_conf 999999985888955799985859987732210130000330-5899517852012231189479997366640899999
Q gi|254781165|r 18 QWMQEAQSSESHDPHAVVLATADRMGFPNARVVLIKHFDQEG-FVFYTNSQSPKGKEILENPKASLCFHWKSLARQLRVR 96 (201)
Q Consensus 18 ~W~~~A~~~~~~~p~a~~LaTvd~~g~p~~R~V~lr~~~~~g-~~f~Tn~~S~K~~~l~~np~~al~f~w~~~~rQiRi~ 96 (201)
.|+.++.+. +.+++.|+|||++.+|.|++|.|.+...++++ |.|+|+.+|+|+++|..||+|+++|+++...+||+|.
T Consensus 4 ~~~~e~~e~-l~~~~~~~LaT~~~dG~P~~~p~~~~~~~~~~~l~f~T~~~s~K~~~l~~np~vsl~~~~~~~~~~v~i~ 82 (141)
T d2hq7a1 4 KFLIESNEL-VESSKIVMVGTNGENGYPNIKAMMRLKHDGLKKFWLSTNTSTRMVERLKKNNKICLYFVDDNKFAGLMLV 82 (141)
T ss_dssp HHHHHHHHH-HHHCSEEEEEEECGGGCEEEEEEEEEEEETTTEEEEEEECCHHHHHHHHHCCEEEEEEECSSSSEEEEEE
T ss_pred HHHHHHHHH-HHCCCEEEEEEECCCCCEEEEEEEEEEECCCCEEEEEECCCCHHHHHHHHCCCCEEEEECCCCCEEEEEE
T ss_conf 789999999-8159989999988999996888887886159889999658875999887488618999618885588999
Q ss_pred EEEECCCHHH-HHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCC
Q ss_conf 8752176378-889752388333502662177656787777888888888750578877979732799970079961378
Q gi|254781165|r 97 GLVEKYCDLA-SDHYYASRPRESKIGAWASKQSQKMPSLDDLQKSVQRYSSFYQEKEIPRPVWWHGFRICPLSIEFWSER 175 (201)
Q Consensus 97 G~~~~l~~~~-~d~yf~~Rp~~sqi~a~~s~QS~~i~s~~~l~~~~~~~~~~~~~~~ip~P~~w~g~~i~P~~iEFw~~~ 175 (201)
|+|+.+.+.+ ..++|... + ...|++++ .-+.|+.++|.|+++|||.+.
T Consensus 83 G~a~i~~d~~~~~~~w~~~----------------------~-------~~~~p~g~--~dp~~~llri~P~~~~~w~~~ 131 (141)
T d2hq7a1 83 GTIEILHDRASKEMLWTDG----------------------C-------EIYYPLGI--DDPDYTALCFTAEWGNYYRHL 131 (141)
T ss_dssp EEEEEECCHHHHHHHCCTT----------------------H-------HHHCTTGG--GCTTEEEEEEEEEEEEEEETT
T ss_pred EEEEEECCHHHHHHHHHHH----------------------H-------HHHCCCCC--CCCCEEEEEEEEEEEEEECCC
T ss_conf 9999972889999998999----------------------9-------98565899--999789999997099997045
Q ss_pred CC
Q ss_conf 98
Q gi|254781165|r 176 PY 177 (201)
Q Consensus 176 ~~ 177 (201)
.+
T Consensus 132 ~~ 133 (141)
T d2hq7a1 132 KN 133 (141)
T ss_dssp EE
T ss_pred CC
T ss_conf 76
No 8
>d2i02a1 b.45.1.1 (A:5-147) General stress protein 26 {Nostoc punctiforme pcc 73102 [TaxId: 63737]}
Probab=99.82 E-value=1.1e-19 Score=131.56 Aligned_cols=127 Identities=13% Similarity=0.171 Sum_probs=100.9
Q ss_pred CCCCCEEEEEEECCCCCEEEEEEEHHE-EECCE-EEEEECCCCCCHHHHHCCCCEEEEEECCCCEEEEEEEEEEECCCH-
Q ss_conf 889557999858599877322101300-00330-589951785201223118947999736664089999987521763-
Q gi|254781165|r 28 SHDPHAVVLATADRMGFPNARVVLIKH-FDQEG-FVFYTNSQSPKGKEILENPKASLCFHWKSLARQLRVRGLVEKYCD- 104 (201)
Q Consensus 28 ~~~p~a~~LaTvd~~g~p~~R~V~lr~-~~~~g-~~f~Tn~~S~K~~~l~~np~~al~f~w~~~~rQiRi~G~~~~l~~- 104 (201)
..+.+.++|||++.+|.|++|.|.+.. .++++ +.|+|+..|+|+++|+.||+|+++|+++...++|+|+|+|+.+.+
T Consensus 14 l~~~~~~~laT~~~dG~P~~~pm~~~~~~~~~~~i~f~t~~~s~K~~~l~~np~vsl~~~~~~~~~~v~i~G~A~iv~d~ 93 (143)
T d2i02a1 14 IKNIDYGMFTTVDDDGSLHSYPMSKSGDINSEATLWFFTYAGSHKVTEIEHHEQVNVSFSSPEQQRYVSISGTSQLVKDR 93 (143)
T ss_dssp HTTCCEEEEEEECTTSCEEEEEEECBCC---CCEEEEEEETTSHHHHHHHHCCEEEEEEEETTTTEEEEEEEEEEEECCH
T ss_pred HHCCCEEEEEEECCCCCEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHCCCCEEEEEEEECCCCEEEEEEEEEEEECCH
T ss_conf 80899899999889999789878899861777289999378646666521486699999807888699999999998088
Q ss_pred HHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEEE
Q ss_conf 78889752388333502662177656787777888888888750578877979732799970079961378986402699
Q gi|254781165|r 105 LASDHYYASRPRESKIGAWASKQSQKMPSLDDLQKSVQRYSSFYQEKEIPRPVWWHGFRICPLSIEFWSERPYRLHDRLL 184 (201)
Q Consensus 105 ~~~d~yf~~Rp~~sqi~a~~s~QS~~i~s~~~l~~~~~~~~~~~~~~~ip~P~~w~g~~i~P~~iEFw~~~~~rlHdR~~ 184 (201)
+..+++|+.. + ...+.+++ -.+.++.++|.|+++|||.+..++.++++.
T Consensus 94 ~~~~~~w~~~----------------------~-------~~~~~~g~--~~p~~~liri~p~~~~~wd~~~~~~p~~~~ 142 (143)
T d2i02a1 94 NKMRELWKPE----------------------L-------QTWFPKGL--DEPDIALLKVNINQVNYWDSTSSFKPQTIS 142 (143)
T ss_dssp HHHHHHCCGG----------------------G-------GGTCTTGG--GCTTEEEEEEEEEEEEEEEGGGTTSCEEEE
T ss_pred HHHHHHHHHH----------------------H-------HHHCCCCC--CCCCEEEEEEEEEEEEEECCCCCCCCEEEE
T ss_conf 9999999999----------------------9-------98634799--999799999994099998589998863567
Q ss_pred E
Q ss_conf 9
Q gi|254781165|r 185 F 185 (201)
Q Consensus 185 y 185 (201)
|
T Consensus 143 f 143 (143)
T d2i02a1 143 F 143 (143)
T ss_dssp C
T ss_pred C
T ss_conf 9
No 9
>d1rfea_ b.45.1.1 (A:) Hypothetical protein Rv2991 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.41 E-value=2e-12 Score=89.41 Aligned_cols=126 Identities=17% Similarity=0.160 Sum_probs=85.5
Q ss_pred CCEEEEEEECCCCCEEEEEEEHHEEECCEEEEEECCCCCCHHHHHCCCCEEEEEECCC---CEEEEEEEEEEECCCHHHH
Q ss_conf 5579998585998773221013000033058995178520122311894799973666---4089999987521763788
Q gi|254781165|r 31 PHAVVLATADRMGFPNARVVLIKHFDQEGFVFYTNSQSPKGKEILENPKASLCFHWKS---LARQLRVRGLVEKYCDLAS 107 (201)
Q Consensus 31 p~a~~LaTvd~~g~p~~R~V~lr~~~~~g~~f~Tn~~S~K~~~l~~np~~al~f~w~~---~~rQiRi~G~~~~l~~~~~ 107 (201)
.+.|.|||++.||.|+++.|.+. ++++.|.|+|...|+|.++|..||+|+++|..+. ..+.|.|.|+|+.+++.+.
T Consensus 21 ~~~~~LaT~~~dG~P~~~pv~~~-~~~~~l~~~t~~~s~k~~~l~~np~v~l~i~~~~~~~~~~~V~v~G~A~iv~d~~~ 99 (160)
T d1rfea_ 21 SRTGTLATIGPDGQPHLTAMWYA-VIDGEIWLETKAKSQKAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEPEA 99 (160)
T ss_dssp CCCEEEEEECTTSCEEEEEECCE-EETTEEEEEEETTSHHHHHHHHCCEEEEEEEECSSGGGCEEEEEEEEEEEECCHHH
T ss_pred CCEEEEEEECCCCCEEEEEEEEE-ECCCEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCEEEEEEEEEEEEECCHHH
T ss_conf 99899999999999899977889-80987999855986087561579749999972776663448999999999479899
Q ss_pred HHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCC
Q ss_conf 89752388333502662177656787777888888888750578877979732799970079961378986
Q gi|254781165|r 108 DHYYASRPRESKIGAWASKQSQKMPSLDDLQKSVQRYSSFYQEKEIPRPVWWHGFRICPLSIEFWSERPYR 178 (201)
Q Consensus 108 d~yf~~Rp~~sqi~a~~s~QS~~i~s~~~l~~~~~~~~~~~~~~~ip~P~~w~g~~i~P~~iEFw~~~~~r 178 (201)
...+..+ ...+..... .+........ .++....|+|.|.+|.+|..+..+
T Consensus 100 ~~~~~~~--------~~~ky~~~~--~~~~~~~~~~-----------~~~~~~~~ri~p~~i~~wd~~k~~ 149 (160)
T d1rfea_ 100 LHRVGVS--------VWERYTGPY--TDECKPMVDQ-----------MMNKRVGVRIVARRTRSWDHRKLG 149 (160)
T ss_dssp HHHHHHH--------HHHHHTCCC--CGGGHHHHHH-----------HTTTEEEEEEEEEEEEEEEGGGGC
T ss_pred HHHHHHH--------HHHHHCCCC--CCHHHHHHHC-----------CCCCEEEEEEEEEEEEEEECCCCC
T ss_conf 9999999--------999854867--1110011222-----------489889999999999998067767
No 10
>d1w9aa_ b.45.1.1 (A:) Hypothetical protein Rv1155 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.36 E-value=5.7e-13 Score=92.58 Aligned_cols=84 Identities=15% Similarity=0.035 Sum_probs=69.4
Q ss_pred HHHCCCCCCCEEEEEEECCCCCEEEEEEEHHEEECCE-EEEEECCCCCCHHHHHCCCCEEEEEECCCCEEEEEEEEEEEC
Q ss_conf 9985888955799985859987732210130000330-589951785201223118947999736664089999987521
Q gi|254781165|r 23 AQSSESHDPHAVVLATADRMGFPNARVVLIKHFDQEG-FVFYTNSQSPKGKEILENPKASLCFHWKSLARQLRVRGLVEK 101 (201)
Q Consensus 23 A~~~~~~~p~a~~LaTvd~~g~p~~R~V~lr~~~~~g-~~f~Tn~~S~K~~~l~~np~~al~f~w~~~~rQiRi~G~~~~ 101 (201)
....=...++.++|||++.+|.|+++.|.+...++.+ +.|+|+..|.|.++|..||+||++++.+...++++|+|+|+.
T Consensus 4 ~~~~~l~~~~~~~LaTv~~dG~P~~~pv~~~~~~~~~~~~~~t~~~s~K~~nl~~nPrvsl~v~~~~~~~~v~i~G~a~~ 83 (142)
T d1w9aa_ 4 KLLAVISGNSIGVLATIKHDGRPQLSNVQYHFDPRKLLIQVSIAEPRAKTRNLRRDPRASILVDADDGWSYAVAEGTAQL 83 (142)
T ss_dssp HHHHHHHTCSEEEEEEECTTSCEEEEEEECEEETTTTEEEEEEECCCGGGGGGGTCCEEEEEEECSSSSCEEEEEEECEE
T ss_pred HHHHHHCCCCEEEEEEECCCCCEEEEEEEEEEECCCCEEEECCCCHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEEEEE
T ss_conf 99998726986999998999986787444565304752771345078898872359859999984788568999999999
Q ss_pred CCHHH
Q ss_conf 76378
Q gi|254781165|r 102 YCDLA 106 (201)
Q Consensus 102 l~~~~ 106 (201)
+.+.+
T Consensus 84 ~~~~~ 88 (142)
T d1w9aa_ 84 TPPAA 88 (142)
T ss_dssp CCCCC
T ss_pred EECCC
T ss_conf 85463
No 11
>d2asfa1 b.45.1.1 (A:11-135) Hypothetical protein Rv2074 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.34 E-value=1.3e-11 Score=84.79 Aligned_cols=113 Identities=18% Similarity=0.068 Sum_probs=84.0
Q ss_pred CCCCCCEEEEEEECCCCCEEEEEEEHHEEECCE-EEEEECCCCCCHHHHHCCCCEEEEEECCCCEEEEEEEEEEECCCHH
Q ss_conf 888955799985859987732210130000330-5899517852012231189479997366640899999875217637
Q gi|254781165|r 27 ESHDPHAVVLATADRMGFPNARVVLIKHFDQEG-FVFYTNSQSPKGKEILENPKASLCFHWKSLARQLRVRGLVEKYCDL 105 (201)
Q Consensus 27 ~~~~p~a~~LaTvd~~g~p~~R~V~lr~~~~~g-~~f~Tn~~S~K~~~l~~np~~al~f~w~~~~rQiRi~G~~~~l~~~ 105 (201)
=..+++.++|||++.||.|+++.|.+-...++| +.|+|+..|+|..+|..||+|++++..+ .+.|.|+|+|+.+++.
T Consensus 7 ~L~~~~~~~LaT~~~dG~P~~~pv~~~~~~~~~~i~~~t~~~s~K~~~l~~~prvsl~v~d~--~~~v~i~G~a~i~~D~ 84 (125)
T d2asfa1 7 FLSERHLAMLTTLRADNSPHVVAVGFTFDPKTHIARVITTGGSQKAVNADRSGLAVLSQVDG--ARWLSLEGRAAVNSDI 84 (125)
T ss_dssp HTTSSCCEEEEEECTTSCEEEEEECCEEETTTTEEEEEEETTCHHHHHHHHHCEEEEEEEET--TEEEEEEEEEEEECCH
T ss_pred HHHCCCEEEEEEECCCCCEEEEEEEEEEECCCCEEEEEECCCCEEEEEEECCCCEEEEEECC--CCEEEEEEEEEEECCH
T ss_conf 98369879999998999898998877660687279997179870333463499279999779--9579999999995788
Q ss_pred HHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEC
Q ss_conf 8889752388333502662177656787777888888888750578877979732799970079961
Q gi|254781165|r 106 ASDHYYASRPRESKIGAWASKQSQKMPSLDDLQKSVQRYSSFYQEKEIPRPVWWHGFRICPLSIEFW 172 (201)
Q Consensus 106 ~~d~yf~~Rp~~sqi~a~~s~QS~~i~s~~~l~~~~~~~~~~~~~~~ip~P~~w~g~~i~P~~iEFw 172 (201)
+.. .+....+.++|.. +.+.| ....++|.|++|-.+
T Consensus 85 ~~~-----------------------------~~~~~~~~~~y~~-~~~~~-~rvvi~i~p~r~~g~ 120 (125)
T d2asfa1 85 DAV-----------------------------RDAELRYAQRYRT-PRPNP-RRVVIEVQIERVLGS 120 (125)
T ss_dssp HHH-----------------------------HHHHHHHHHHSCC-CCCCT-TEEEEEEEEEEEEEC
T ss_pred HHH-----------------------------HHHHHHHHHHHCC-CCCCC-CEEEEEEEEEEEEEE
T ss_conf 899-----------------------------9999999987267-78899-889999998799998
No 12
>d2fg9a1 b.45.1.1 (A:1-157) 5-nitroimidazole resistance protein BT3078 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=99.14 E-value=4.1e-10 Score=76.00 Aligned_cols=75 Identities=16% Similarity=0.218 Sum_probs=62.3
Q ss_pred CCCEEEEEEECCCCCEEEEEEEHHEEECCEEEEEECCCCCCHHHHHCCCCEEEEEECCCC---------------EEEEE
Q ss_conf 955799985859987732210130000330589951785201223118947999736664---------------08999
Q gi|254781165|r 30 DPHAVVLATADRMGFPNARVVLIKHFDQEGFVFYTNSQSPKGKEILENPKASLCFHWKSL---------------ARQLR 94 (201)
Q Consensus 30 ~p~a~~LaTvd~~g~p~~R~V~lr~~~~~g~~f~Tn~~S~K~~~l~~np~~al~f~w~~~---------------~rQiR 94 (201)
..+.|.|||++.||.|.+..|.+ .++++.+.|+|...|+|...|+.||+|++++.-+.- -+.|.
T Consensus 18 ~~~~~~Lat~~~dG~P~~~Pv~f-~~~~~~iy~h~~~~~~K~~~l~~np~V~~~v~~~~~~~~~~~~~~~~~~~~y~sV~ 96 (157)
T d2fg9a1 18 QADACFVGITDLEGNPYVVPMNF-GYENDTLYLHSGPEGGKIEMLQRNNNVCITFSLGHKLVYQHKQVACSYSMRSESAM 96 (157)
T ss_dssp HCSCEEEEEECTTSCEEEEEECC-EEETTEEEEEECSCSHHHHHHHHCCEEEEEEECCCEEEEEC----CEEEEEEEEEE
T ss_pred CCCEEEEEEECCCCCEEEEEEEE-EEECCEEEEECCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 39989999999999889998786-64588899984783478998743990899997487631122223456665379999
Q ss_pred EEEEEECCCHH
Q ss_conf 99875217637
Q gi|254781165|r 95 VRGLVEKYCDL 105 (201)
Q Consensus 95 i~G~~~~l~~~ 105 (201)
+.|+|+.+++.
T Consensus 97 v~G~a~~v~d~ 107 (157)
T d2fg9a1 97 CRGKVEFIEDM 107 (157)
T ss_dssp EEEECEEECSH
T ss_pred EEEEEEEECCH
T ss_conf 99899997599
No 13
>d1flma_ b.45.1.1 (A:) FMN-binding protein {Desulfovibrio vulgaris, strain Miyazaki F [TaxId: 881]}
Probab=99.13 E-value=1.9e-10 Score=77.97 Aligned_cols=78 Identities=13% Similarity=0.154 Sum_probs=65.7
Q ss_pred CCCCEEEEEEECCCCCEEEEEEEHH---EEECCEEEEEECCCCCCHHHHHCCCCEEEEEECCCC------EEEEEEEEEE
Q ss_conf 8955799985859987732210130---000330589951785201223118947999736664------0899999875
Q gi|254781165|r 29 HDPHAVVLATADRMGFPNARVVLIK---HFDQEGFVFYTNSQSPKGKEILENPKASLCFHWKSL------ARQLRVRGLV 99 (201)
Q Consensus 29 ~~p~a~~LaTvd~~g~p~~R~V~lr---~~~~~g~~f~Tn~~S~K~~~l~~np~~al~f~w~~~------~rQiRi~G~~ 99 (201)
..+..+.|||+++|| |++..+... -+|++.+.|.|+..|.|.++|+.||+|+++|..++. ++.+||.|+|
T Consensus 11 ~~~~~~~laT~~~dg-P~v~p~~~~~~~v~dd~~i~~~~~~~~~k~~Ni~~np~V~l~~~~~~~~~~~~~~~~~~v~G~A 89 (122)
T d1flma_ 11 KNEGVVAIATQGEDG-PHLVNTWNSYLKVLDGNRIVVPVGGMHKTEANVARDERVLMTLGSRKVAGRNGPGTGFLIRGSA 89 (122)
T ss_dssp TSCCEEEEEEECSSS-EEEEEEEGGGCEEETTTEEEEEESSCHHHHHHHHHCCEEEEEEEEEEEECSSSEEEEEEEEEEE
T ss_pred HCCCEEEEEEECCCC-CCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEEEEE
T ss_conf 169829999978999-8585423205998379999998568774788873189689999865545544784199999999
Q ss_pred ECCCHHHH
Q ss_conf 21763788
Q gi|254781165|r 100 EKYCDLAS 107 (201)
Q Consensus 100 ~~l~~~~~ 107 (201)
+.+.+...
T Consensus 90 ~i~~dg~~ 97 (122)
T d1flma_ 90 AFRTDGPE 97 (122)
T ss_dssp EEESSSHH
T ss_pred EEECCHHH
T ss_conf 99519899
No 14
>d1vl7a_ b.45.1.1 (A:) Hypothetical protein Alr5027 {Cyanobacterium (Nostoc sp. PCC 7120) [TaxId: 103690]}
Probab=98.99 E-value=2.4e-09 Score=71.61 Aligned_cols=75 Identities=17% Similarity=0.223 Sum_probs=61.5
Q ss_pred CCCEEEEEEECCCCCEEEEEEEHHEEECCE-EEEEECCCCCCHHHHHCCCCEEEEEECCC-------CEEEEEEEEEEEC
Q ss_conf 955799985859987732210130000330-58995178520122311894799973666-------4089999987521
Q gi|254781165|r 30 DPHAVVLATADRMGFPNARVVLIKHFDQEG-FVFYTNSQSPKGKEILENPKASLCFHWKS-------LARQLRVRGLVEK 101 (201)
Q Consensus 30 ~p~a~~LaTvd~~g~p~~R~V~lr~~~~~g-~~f~Tn~~S~K~~~l~~np~~al~f~w~~-------~~rQiRi~G~~~~ 101 (201)
+-..|+|||++.+|.|.+-+|.+ -++++| +.|+|...|+|.++|..||+||+++.-+. ....+.+.|.++.
T Consensus 7 ~~~~~~LaTv~~dG~P~~s~v~y-~~~~~~~~~~~~s~~s~h~~Ni~~np~vSl~i~~~~~~~~~~~~~~~v~~~g~~~~ 85 (135)
T d1vl7a_ 7 EFQSAIISTISEQGIPNGSYAPF-VIDDAKNIYIYVSGLAVHTKNIEANPLVNVLFVDDEAKTNQIFARRRLSFDCTATL 85 (135)
T ss_dssp TCSEEEEEEECTTSCEEEEEEEE-EECTTCCEEEEECTTSHHHHHHHHCCEEEEEEECCGGGCSSGGGCCEEEEEEEEEE
T ss_pred HCCEEEEEEECCCCCEEEEEEEE-EECCCCCEEEEECCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEEEEE
T ss_conf 47979999848999889999999-99389978998544377788887499569999657666666211405899977897
Q ss_pred CCHH
Q ss_conf 7637
Q gi|254781165|r 102 YCDL 105 (201)
Q Consensus 102 l~~~ 105 (201)
++++
T Consensus 86 i~~~ 89 (135)
T d1vl7a_ 86 IERE 89 (135)
T ss_dssp ECTT
T ss_pred CCCC
T ss_conf 1671
No 15
>d2htia1 b.45.1.1 (A:10-165) Hypothetical protein BH0577 {Bacillus halodurans [TaxId: 86665]}
Probab=98.74 E-value=7.1e-08 Score=63.06 Aligned_cols=75 Identities=15% Similarity=0.123 Sum_probs=61.2
Q ss_pred CCCEEEEEEECCCCCEEEEEEEHHEEECCEEEEEECCCCCCHHHHHCCCCEEEEEECCC-------------CEEEEEEE
Q ss_conf 95579998585998773221013000033058995178520122311894799973666-------------40899999
Q gi|254781165|r 30 DPHAVVLATADRMGFPNARVVLIKHFDQEGFVFYTNSQSPKGKEILENPKASLCFHWKS-------------LARQLRVR 96 (201)
Q Consensus 30 ~p~a~~LaTvd~~g~p~~R~V~lr~~~~~g~~f~Tn~~S~K~~~l~~np~~al~f~w~~-------------~~rQiRi~ 96 (201)
+...+.|||++ +|.|.+..|.+ .++++.+.|+|...++|...|+.||+|++++.-.. .-+.|.+.
T Consensus 14 ~~~~~~Lat~~-~g~P~vvPv~f-~~~~~~l~~~~~~~~~k~~~l~~np~v~~~v~~~~~~~~~~~~~~~t~~y~SV~v~ 91 (156)
T d2htia1 14 KARTGFLGLST-NDQPYVIPLNF-VWHNHAIYFHGASEGRKIKMIEANPEVCFTICEDLGTIVSPVPAHTDTAYMSVIIF 91 (156)
T ss_dssp HCCCEEEEEEE-TTEEEEEEECC-EEETTEEEEEEESSSHHHHHHHHCCEEEEEEEECC-------------CEEEEEEE
T ss_pred CCCEEEEEEEC-CCCEEEEEEEE-EEECCEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEE
T ss_conf 29989999902-99679999999-99479899963760458999735995999997266432245766445548999999
Q ss_pred EEEECCCHHH
Q ss_conf 8752176378
Q gi|254781165|r 97 GLVEKYCDLA 106 (201)
Q Consensus 97 G~~~~l~~~~ 106 (201)
|+++.+++.+
T Consensus 92 G~a~~v~d~e 101 (156)
T d2htia1 92 GTIEPVSAIE 101 (156)
T ss_dssp EEEEECCCHH
T ss_pred EEEEEECCHH
T ss_conf 9999957999
No 16
>d2hq9a1 b.45.1.1 (A:1-148) Hypothetical protein Mll6688 {Mesorhizobium loti [TaxId: 381]}
Probab=98.63 E-value=3.9e-07 Score=58.73 Aligned_cols=73 Identities=19% Similarity=0.161 Sum_probs=59.0
Q ss_pred CCCEEEEEEECCCCCEEEEEEEHHEEECCEEEEEECCCCCCHHHHHCCCCEEEEEECCC---CEEEEEEEEEEECCCHH
Q ss_conf 95579998585998773221013000033058995178520122311894799973666---40899999875217637
Q gi|254781165|r 30 DPHAVVLATADRMGFPNARVVLIKHFDQEGFVFYTNSQSPKGKEILENPKASLCFHWKS---LARQLRVRGLVEKYCDL 105 (201)
Q Consensus 30 ~p~a~~LaTvd~~g~p~~R~V~lr~~~~~g~~f~Tn~~S~K~~~l~~np~~al~f~w~~---~~rQiRi~G~~~~l~~~ 105 (201)
++..+.|||++ +|.|.+..|.+ .++++.+.|+|. .++|...|..||+|++++.... --+-|.+.|+++.+++.
T Consensus 17 ~~~~g~Lat~~-~g~P~v~Pv~f-~~~~~~iy~~t~-~~~K~~~l~~np~Vs~~v~~~~~~~~~~sV~v~G~a~~v~d~ 92 (148)
T d2hq9a1 17 ANRVGRLACAK-DGQPYVVPLYY-AYSDAHLYAFSM-PGKKIEWMRANPRVSVQVDEHGQGRGWKSVVVDGRYEELPDL 92 (148)
T ss_dssp HCCEEEEEEEE-TTEEEEEEEEC-EEETTEEEEEEC-SSHHHHHHHHCCEEEEEEEEECSTTCEEEEEEEEEEEECCSC
T ss_pred CCCEEEEEEEE-CCCEEEEEEEE-EEECCEEEEEEC-CHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEEEEEEEEECC
T ss_conf 49979999972-99679999999-998999999957-267999986799599999955664005799999999997274
No 17
>d2arza1 b.45.1.1 (A:2-239) Hypothetical protein PA4388 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=98.34 E-value=1.4e-05 Score=49.74 Aligned_cols=87 Identities=20% Similarity=0.322 Sum_probs=66.0
Q ss_pred CCEEEEEEECCC--CCEEEEEEEHHEEECCE-EEEEECCCCCCHHHHHCCCCEEEEEECCC-----CEEEEEEEEEEECC
Q ss_conf 557999858599--87732210130000330-58995178520122311894799973666-----40899999875217
Q gi|254781165|r 31 PHAVVLATADRM--GFPNARVVLIKHFDQEG-FVFYTNSQSPKGKEILENPKASLCFHWKS-----LARQLRVRGLVEKY 102 (201)
Q Consensus 31 p~a~~LaTvd~~--g~p~~R~V~lr~~~~~g-~~f~Tn~~S~K~~~l~~np~~al~f~w~~-----~~rQiRi~G~~~~l 102 (201)
.+..+|||++.+ |.|.+-+|.+- .+++| ++|++..-|.+.++|..||+|+|++-.+. ....+.+.|.++++
T Consensus 15 ~~~~~LsT~~~~~~G~P~~S~v~~a-~d~~G~p~~~~S~la~Ht~NL~~d~rvSL~v~~~~~~~~~~~~R~tl~g~~~~~ 93 (238)
T d2arza1 15 EYRAVLSTHSKKWPGFPFGSVVPYC-LDAEGRPLILISRIAQHTHNLQADPRCSMLVGERGAEDIQAVGRLTLLAEARQL 93 (238)
T ss_dssp CSEEEEEEECSSSTTCEEEEEEECE-ECTTSCEEEEEETTSHHHHHHHHCCEEEEEEECTTCSSTTSSCEEEEEEEEEEC
T ss_pred CCEEEEEECCCCCCCCCEEEEEEEE-ECCCCCEEEEEECCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEEEEC
T ss_conf 8859999517998998517878999-989998999992612766752108947999975776664220010200146865
Q ss_pred CHHHH----HHHHHCCCCCC
Q ss_conf 63788----89752388333
Q gi|254781165|r 103 CDLAS----DHYYASRPRES 118 (201)
Q Consensus 103 ~~~~~----d~yf~~Rp~~s 118 (201)
++++. +.|+...|...
T Consensus 94 ~~~e~~~~~~~~~~rhP~~~ 113 (238)
T d2arza1 94 AEEEVAAAAERYYRYFPESA 113 (238)
T ss_dssp CHHHHHHHHHHHHHHCGGGT
T ss_pred CCHHHHHHHHHHHHHCCCHH
T ss_conf 81678999999997602032
No 18
>d2fura1 b.45.1.1 (A:16-208) Hypothetical protein Ta1372 {Thermoplasma acidophilum [TaxId: 2303]}
Probab=97.91 E-value=3.4e-05 Score=47.52 Aligned_cols=75 Identities=9% Similarity=-0.018 Sum_probs=58.7
Q ss_pred CCCEEEEEEECCCCCEEEEEEEHHEEECCEEEEEECCCCCCHHHHHCCCCEEEEEECCC-------------CEEEEEEE
Q ss_conf 95579998585998773221013000033058995178520122311894799973666-------------40899999
Q gi|254781165|r 30 DPHAVVLATADRMGFPNARVVLIKHFDQEGFVFYTNSQSPKGKEILENPKASLCFHWKS-------------LARQLRVR 96 (201)
Q Consensus 30 ~p~a~~LaTvd~~g~p~~R~V~lr~~~~~g~~f~Tn~~S~K~~~l~~np~~al~f~w~~-------------~~rQiRi~ 96 (201)
....|.|||++ +|.|.+-.+.+ .++++.+.|++...++|...|..||+|++++--.. .-+.|-+.
T Consensus 15 ~~~~~~la~~~-~g~PyvvP~~f-~~~~~~ly~H~a~~g~k~~~l~~np~V~~~v~~~~~~v~~~~~~~~t~~YrSViv~ 92 (193)
T d2fura1 15 RNFTCTVSFID-GGIPYAIPMML-ASEGKTIYLHGSMKSRIYGILKTGQLIAISLLEINGIVLAKEIKNNSINYVSALIF 92 (193)
T ss_dssp HCSEEEEEEEE-TTEEEEEEEEC-EEETTEEEEEEETTSHHHHHHHTTCCEEEEEEEEEEEEECSBGGGCEEEEEEEEEE
T ss_pred HCCEEEEEEEE-CCEEEEEEEEE-EEECCEEEEEECCCCHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCEEEEEEEEE
T ss_conf 29989999961-99479999999-99179899983385368998644996999998532154279857664579999999
Q ss_pred EEEECCCHHH
Q ss_conf 8752176378
Q gi|254781165|r 97 GLVEKYCDLA 106 (201)
Q Consensus 97 G~~~~l~~~~ 106 (201)
|+++.+++++
T Consensus 93 G~a~~v~d~e 102 (193)
T d2fura1 93 GRPYEIDDTE 102 (193)
T ss_dssp ECCEECCCHH
T ss_pred EEEEEECCHH
T ss_conf 8999946789
No 19
>d2vpaa1 b.45.1.1 (A:2-195) NimA-related protein DR0842 {Deinococcus radiodurans [TaxId: 1299]}
Probab=97.44 E-value=0.00029 Score=42.12 Aligned_cols=76 Identities=16% Similarity=0.040 Sum_probs=57.6
Q ss_pred CCEEEEEEECC----CCCEEEEEEEHHEEECC-EEEEEECCCCCCHHHHHCCCCEEEEEECCC-------------CEEE
Q ss_conf 55799985859----98773221013000033-058995178520122311894799973666-------------4089
Q gi|254781165|r 31 PHAVVLATADR----MGFPNARVVLIKHFDQE-GFVFYTNSQSPKGKEILENPKASLCFHWKS-------------LARQ 92 (201)
Q Consensus 31 p~a~~LaTvd~----~g~p~~R~V~lr~~~~~-g~~f~Tn~~S~K~~~l~~np~~al~f~w~~-------------~~rQ 92 (201)
...+.|||++. .|.|.+--+.+-.-.++ .|.|++...++|...|..||+|++++.... .-+.
T Consensus 33 ~~~~~la~~~~g~~~~~~Py~vPl~f~~~~~~~~ly~H~a~~g~k~~~l~~~~~v~~~v~~~~~~v~~~~~~~~t~~Y~S 112 (194)
T d2vpaa1 33 GTIARVATLWQGEDGAAFPFITPLAYAYRPEQGDLVYHTNVVGRLRANAGQGHPATLEVSEIGQFLPSNSPLELSVQYRS 112 (194)
T ss_dssp CCEEEEEEEEECTTSCEEEEEEEEECEEETTTTEEEEECCCCCSSBSSCSSEEEEEEEEEEEEEEECCSSGGGCEEEEEE
T ss_pred CCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCHHHHHHHCCCCEEEEEEECCEEECCCCCCCCCCEEEE
T ss_conf 99899999637987787778970884885689989999267347889875299559999833478648876766724899
Q ss_pred EEEEEEEECCCHHH
Q ss_conf 99998752176378
Q gi|254781165|r 93 LRVRGLVEKYCDLA 106 (201)
Q Consensus 93 iRi~G~~~~l~~~~ 106 (201)
|-+.|+|+.+++++
T Consensus 113 Vi~~G~a~~v~d~e 126 (194)
T d2vpaa1 113 VMVFGTARVLAGED 126 (194)
T ss_dssp EEEEEEEEECCHHH
T ss_pred EEEEEEEEECCCHH
T ss_conf 99999999848789
No 20
>d1xhna1 b.45.1.1 (A:13-182) Cellular repressor of E1A-stimulated genes CREG1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.28 E-value=0.00093 Score=39.17 Aligned_cols=114 Identities=20% Similarity=0.160 Sum_probs=72.8
Q ss_pred CCEEEEEEEC----CCCCEEEEEEEHHE---EECCEE-EEEECCCCCCHHHHHCCCCEEEEEECCCCE------------
Q ss_conf 5579998585----99877322101300---003305-899517852012231189479997366640------------
Q gi|254781165|r 31 PHAVVLATAD----RMGFPNARVVLIKH---FDQEGF-VFYTNSQSPKGKEILENPKASLCFHWKSLA------------ 90 (201)
Q Consensus 31 p~a~~LaTvd----~~g~p~~R~V~lr~---~~~~g~-~f~Tn~~S~K~~~l~~np~~al~f~w~~~~------------ 90 (201)
-+-.+|||++ .+|.|-+-+|-+-+ .+..|. +|+-..-+...++|..||+|+|++-.....
T Consensus 18 ~~~g~LsTiS~~~~~~G~P~~s~v~~adg~~~~~~G~P~~llS~la~ht~Nl~~~~~vSL~v~~~~~~~~~~~~~dp~~p 97 (170)
T d1xhna1 18 SDWGALATISTLEAVRGRPFADVLSLSDGPPGAGSGVPYFYLSPLQLSVSNLQENPYATLTMTLAQTNFCKKHGFDPQSP 97 (170)
T ss_dssp CSEEEEEEECCCGGGTTCEEEEEEECBSCSTTCCCSCCEEEECTTSHHHHHHHHCCEEEEEEEGGGTTHHHHHTCCTTST
T ss_pred CCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCC
T ss_conf 88799997404888799653057898406777889988999837247678885299769999835888644467886677
Q ss_pred --EEEEEEEEEECCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCCCCCEEEEEEEE
Q ss_conf --8999998752176378889752388333502662177656787777888888888750578-8779797327999700
Q gi|254781165|r 91 --RQLRVRGLVEKYCDLASDHYYASRPRESKIGAWASKQSQKMPSLDDLQKSVQRYSSFYQEK-EIPRPVWWHGFRICPL 167 (201)
Q Consensus 91 --rQiRi~G~~~~l~~~~~d~yf~~Rp~~sqi~a~~s~QS~~i~s~~~l~~~~~~~~~~~~~~-~ip~P~~w~g~~i~P~ 167 (201)
--|-+.|.++++++++.+. ..+.+.+++++- .-+.-..|.=|+|.++
T Consensus 98 ~~aRlTl~G~~~~v~~~e~~~------------------------------a~~~yl~rHP~a~~w~~~~df~f~~l~i~ 147 (170)
T d1xhna1 98 LCVHIMLSGTVTKVNETEMDI------------------------------AKHSLFIRHPEMKTWPSSHNWFFAKLNIT 147 (170)
T ss_dssp TSCEEEEEEEEEECCGGGHHH------------------------------HHHHHHHHCGGGGGSCGGGCCEEEEEEEE
T ss_pred CCCEEEEEEEEEECCCHHHHH------------------------------HHHHHHHHHHHHHHCCCCCCEEEEEEEEE
T ss_conf 772799997989789477999------------------------------99999987778974766687299999950
Q ss_pred EEEECCC
Q ss_conf 7996137
Q gi|254781165|r 168 SIEFWSE 174 (201)
Q Consensus 168 ~iEFw~~ 174 (201)
.|-+.-|
T Consensus 148 ~i~~vgG 154 (170)
T d1xhna1 148 NIWVLDY 154 (170)
T ss_dssp EEEEECS
T ss_pred EEEEECC
T ss_conf 9999876
No 21
>d2imja1 d.17.4.23 (A:5-159) Hypothetical protein PFL3262 {Pseudomonas fluorescens [TaxId: 294]}
Probab=78.03 E-value=1.9 Score=19.95 Aligned_cols=79 Identities=16% Similarity=0.311 Sum_probs=56.9
Q ss_pred HHHHHHHHCCCCCCCEEEEEC-----CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCC
Q ss_conf 788897523883335026621-----776567877778888888887505788779797327999700799613789864
Q gi|254781165|r 105 LASDHYYASRPRESKIGAWAS-----KQSQKMPSLDDLQKSVQRYSSFYQEKEIPRPVWWHGFRICPLSIEFWSERPYRL 179 (201)
Q Consensus 105 ~~~d~yf~~Rp~~sqi~a~~s-----~QS~~i~s~~~l~~~~~~~~~~~~~~~ip~P~~w~g~~i~P~~iEFw~~~~~rl 179 (201)
..+.+-|++|.+..=.+|+.. +-++-+..++++.+=+.. +... ++ .|+|+ =|.|....+|+
T Consensus 20 r~AEdaWNsrdP~~ValaYT~Ds~WRNR~eF~~GR~~I~~FL~~---KW~r-E~-------dYrL~---KELwaf~~NRI 85 (155)
T d2imja1 20 RLAEDGWNSRDPERVSLAYTLDTQWRNRAEFAHNREEAKAFLTR---KWAK-EL-------DYRLI---KELWAFTDNRI 85 (155)
T ss_dssp HHHHHHHTTTCHHHHHTTEEEEEEEEETTEEECSHHHHHHHHHH---HHHH-SE-------EEEEE---EEEEEEETTEE
T ss_pred HHHHHHHCCCCCHHEEECCCCCCCCCCCHHHHCCHHHHHHHHHH---HHHH-HH-------HHHHH---HHHHHCCCCEE
T ss_conf 99998663588003365447888677820431778999999998---8887-66-------68889---88751479868
Q ss_pred CEEEEEEEECCCCCEEEE
Q ss_conf 026999881589970799
Q gi|254781165|r 180 HDRLLFSRETIAGKWTQF 197 (201)
Q Consensus 180 HdR~~y~~~~~~~~W~~~ 197 (201)
..|+.|.-....|+|-..
T Consensus 86 AVrF~YEw~D~~gqWfRs 103 (155)
T d2imja1 86 AVRYAYEWHDDSGNWFRS 103 (155)
T ss_dssp EEEEEEEEECTTSCEEEE
T ss_pred EEEEEEEEECCCCCEEHH
T ss_conf 999889898489988521
No 22
>d1uv7a_ d.67.4.1 (A:) General secretion pathway protein M, EpsM {Vibrio cholerae [TaxId: 666]}
Probab=59.49 E-value=5 Score=17.58 Aligned_cols=44 Identities=18% Similarity=0.313 Sum_probs=33.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEE-EEEEHH
Q ss_conf 69799999999999985888955799985859987732-210130
Q gi|254781165|r 10 DVVFTLLSQWMQEAQSSESHDPHAVVLATADRMGFPNA-RVVLIK 53 (201)
Q Consensus 10 ~~P~~lf~~W~~~A~~~~~~~p~a~~LaTvd~~g~p~~-R~V~lr 53 (201)
+-||+.+-.|+.+-.....-....+.++-.+..|..++ |.++=|
T Consensus 34 ~v~F~~ll~WL~~L~~~~Gi~v~~l~i~~~~~~G~V~v~RL~L~r 78 (80)
T d1uv7a_ 34 PLPFSQLVSWIAYLQERQGVSVDAIDIDRGKVNGVVEVKRLQLKR 78 (80)
T ss_dssp CBCHHHHHHHHHHHHHHSCCEEEEEEEEEC----CEEEEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEEEEEEEC
T ss_conf 879899999999997617857999888607999779999999714
No 23
>d2ptfa1 b.45.1.4 (A:15-220) Uncharacterized protein MTH863 {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=45.13 E-value=8.5 Score=16.21 Aligned_cols=54 Identities=13% Similarity=0.135 Sum_probs=41.2
Q ss_pred EEEEEEECCCCCEEEEEEEHHEEECCEEEEEECCCCCCHHHHHCCCCEEEEEEC
Q ss_conf 799985859987732210130000330589951785201223118947999736
Q gi|254781165|r 33 AVVLATADRMGFPNARVVLIKHFDQEGFVFYTNSQSPKGKEILENPKASLCFHW 86 (201)
Q Consensus 33 a~~LaTvd~~g~p~~R~V~lr~~~~~g~~f~Tn~~S~K~~~l~~np~~al~f~w 86 (201)
=..+.|.+.+|.|+.--+=++--+++.+++-.=..|+-..+|..++.+.++|-+
T Consensus 21 E~IvtT~~~~g~~N~AP~GI~~~~~~~v~~~pF~~S~T~~Nl~~~~~~vin~td 74 (206)
T d2ptfa1 21 ETIVVTWDDSMVGNAAPIGVLCTGDDTVTLYLYQGTRTVENVLNNGRFTVNVTL 74 (206)
T ss_dssp EEEEEEECTTCCEEEEEEEEEECSSSEEEEEEETTCHHHHHHHHHSEEEEEECC
T ss_pred EEEEEECCCCCCEECCCEEEEECCCCEEEEEECCCCCHHHHHHHCCEEEEEECC
T ss_conf 999997799997600655779828985999973997069998636939999678
No 24
>d2imla1 b.45.1.4 (A:1-189) Hypothetical protein AF1834 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=32.43 E-value=14 Score=15.02 Aligned_cols=53 Identities=11% Similarity=-0.103 Sum_probs=40.7
Q ss_pred EEEEEECCCCCEEEEEEEHHEEECC-EEEEEECCCCCCHHHHHCCCCEEEEEEC
Q ss_conf 9998585998773221013000033-0589951785201223118947999736
Q gi|254781165|r 34 VVLATADRMGFPNARVVLIKHFDQE-GFVFYTNSQSPKGKEILENPKASLCFHW 86 (201)
Q Consensus 34 ~~LaTvd~~g~p~~R~V~lr~~~~~-g~~f~Tn~~S~K~~~l~~np~~al~f~w 86 (201)
..+.|.+.+|.|++--+=+.--+.. ..+++-=+.|+-..+|..++.+.++|-+
T Consensus 15 vIvtT~~~~g~~n~AP~Gi~~~~~~~~~~~~pf~~S~T~~Nl~~~~~~vvN~t~ 68 (189)
T d2imla1 15 IIAITENEDGSWNAAPIGIIVEDSSSDTAKAKLYRNRTRANLERSGVLFANVTD 68 (189)
T ss_dssp EEEEEECTTSCEEEEEEEEEESCTTSSEEEEECCSSHHHHHHHHHCEEEEEECC
T ss_pred EEEEECCCCCCEEECCEEEEEECCCCCEEEEECCCCCHHHHHHHCCEEEEEECC
T ss_conf 999965899987464445676068997699943788618999757918999755
No 25
>d1wiia_ g.41.3.4 (A:) Hypothetical UPF0222 protein MGC4549 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.24 E-value=20 Score=14.05 Aligned_cols=20 Identities=15% Similarity=0.323 Sum_probs=15.6
Q ss_pred CCCCHHHHHHHHHHHHHHCC
Q ss_conf 87697999999999999858
Q gi|254781165|r 8 NNDVVFTLLSQWMQEAQSSE 27 (201)
Q Consensus 8 ~~~~P~~lf~~W~~~A~~~~ 27 (201)
..++|++.+.+|+++..+.+
T Consensus 63 ~L~epiDVYs~WiDace~~n 82 (85)
T d1wiia_ 63 YLSEPVDVYSDWIDACESGP 82 (85)
T ss_dssp SSCCTTHHHHHHHHHHHHCC
T ss_pred CCCCCHHHHHHHHHHHHHHC
T ss_conf 56843867888999998760
Done!