HHsearch alignment for GI: 254781166 and conserved domain: COG0451
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].
Probab=99.28 E-value=5.4e-10 Score=85.01 Aligned_cols=212 Identities=18% Similarity=0.125 Sum_probs=136.0
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCC-C
Q ss_conf 899948898841799999999988988999848988999999997138928999888999999999999999984798-8
Q gi|254781166|r 12 RGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFRNLEKEWGTI-D 90 (284)
Q Consensus 12 ~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i-D 90 (284)
T Consensus 2 ~iLVtG~tG--fiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~d~~~~~~~~~----~~---~~~~d 66 (314)
T COG0451 2 RILVTGGAG--FIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------SGVEFVVLDLTDRDLVDE----LA---KGVPD 66 (314)
T ss_pred EEEEECCCC--HHHHHHHHHHHHCCCEEEEEECCCCCCCCCC------CCCCEEECCCCCHHHHHH----HH---CCCCC
T ss_conf 699992887--7799999999858997999917875431124------676434225335678998----85---45887
Q ss_pred EEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCC-----------CCH
Q ss_conf 999627212742125862135899985564026402322346788741012210001333234677-----------201
Q gi|254781166|r 91 FLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLMNKGGSMLTLTYLGADKVM-----------PHY 159 (284)
Q Consensus 91 ~lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m~~~G~IInisS~~~~~~~-----------p~~ 159 (284)
T Consensus 67 ~vih~aa~~~~~~~-----~~~--~~~~~~~~nv~gt~~ll~aa~~--~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~ 137 (314)
T COG0451 67 AVIHLAAQSSVPDS-----NAS--DPAEFLDVNVDGTLNLLEAARA--AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPR 137 (314)
T ss_pred EEEECCCCCCCCCC-----CCC--CHHHHHHHHHHHHHHHHHHHHH--CCCCEEEEECCCCEECCCCCCCCCCCCCCCCC
T ss_conf 89988864677533-----321--4788999999999999999986--79987999787501278878888786557888
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCC-CC--HHHHHHHHHHCCC---CC-------CCC
Q ss_conf 2--44544899999999999982774237998522387269456318-99--3899999982688---99-------876
Q gi|254781166|r 160 N--CMGPAKAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLASSGI-SD--FRYILKWNEYNSP---LG-------RNI 224 (284)
Q Consensus 160 ~--~Y~asKaai~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~~~~-~~--~~~~~~~~~~~~p---lg-------R~g 224 (284)
T Consensus 138 p~~~Yg~sK~~~E~~~~~~~~----~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 213 (314)
T COG0451 138 PLNPYGVSKLAAEQLLRAYAR----LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFV 213 (314)
T ss_pred CCCHHHHHHHHHHHHHHHHHH----HCCCCEEEEEECEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCEEEEE
T ss_conf 876779999999999999766----3399579998463788898777420789999999870788503507886224257
Q ss_pred CHHHHHHHHHHHHCHHHCCCCCCEEEECCCC
Q ss_conf 6999999999860988788688689975986
Q gi|254781166|r 225 THDEVAKSALYLLSDFSSGVTGECHYVDAGY 255 (284)
Q Consensus 225 ~peeiA~av~fL~Sd~s~~iTG~~i~vDGG~ 255 (284)
T Consensus 214 ~v~D~~~~~~~~~~~~~~~----~~ni~~~~ 240 (314)
T COG0451 214 YVDDVADALLLALENPDGG----VFNIGSGT 240 (314)
T ss_pred EHHHHHHHHHHHHHCCCCC----EEEECCCC
T ss_conf 7999999999997388871----89946987