HHsearch alignment for GI: 254781166 and conserved domain: COG1090
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only].
Probab=98.07 E-value=2.3e-05 Score=54.85 Aligned_cols=198 Identities=15% Similarity=0.108 Sum_probs=102.5
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf 99948898841799999999988988999848988999999997138928999888999999999999999984798899
Q gi|254781166|r 13 GIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFRNLEKEWGTIDFL 92 (284)
Q Consensus 13 ~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~l 92 (284)
T Consensus 1 IliTGgTGl--IG~~L~~~L~~~gh~v~iltR~~~~~~~~------------~~~~v~~~~~~~~~~~~------~~Dav 60 (297)
T COG1090 1 ILITGGTGL--IGRALTARLRKGGHQVTILTRRPPKASQN------------LHPNVTLWEGLADALTL------GIDAV 60 (297)
T ss_pred CEEECCCCC--HHHHHHHHHHHCCCEEEEEECCCCCHHHH------------CCCCCCCCCHHHHCCCC------CCCEE
T ss_conf 957356650--16899999984898699997478502332------------47653343012440367------87789
Q ss_pred EECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHC---CCCCEECCCCCCCCCCCCCHHHHH----HH
Q ss_conf 96272127421258621358999855640264023223467887410---122100013332346772012445----44
Q gi|254781166|r 93 VHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLMN---KGGSMLTLTYLGADKVMPHYNCMG----PA 165 (284)
Q Consensus 93 Innag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m~---~~G~IInisS~~~~~~~p~~~~Y~----as 165 (284)
T Consensus 61 INLAG~~I~~-------rrWt~~~K~~i---~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g 130 (297)
T COG1090 61 INLAGEPIAE-------RRWTEKQKEEI---RQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPG 130 (297)
T ss_pred EECCCCCCCC-------CCCCHHHHHHH---HHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEECCCCCEEEECCCCCC
T ss_conf 9888981544-------65788999999---9977689999999998526798089852457775588864641578887
Q ss_pred HHHHHHHHHHHHHHH--CCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHH-HCCCCCC----CCCHHHHHHHHHHHHC
Q ss_conf 899999999999982--77423799852238726945631899389999998-2688998----7669999999998609
Q gi|254781166|r 166 KAALQSAVRYLAMDL--GRQSGIRVNALSAGPAKTLASSGISDFRYILKWNE-YNSPLGR----NITHDEVAKSALYLLS 238 (284)
Q Consensus 166 Kaai~~ltk~lA~el--g~~~gIRVN~I~PG~i~T~~~~~~~~~~~~~~~~~-~~~plgR----~g~peeiA~av~fL~S 238 (284)
T Consensus 131 ~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~ 210 (297)
T COG1090 131 DDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLE 210 (297)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHCCHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHH
T ss_conf 77599999999999866640684699998877861788603431013552257715898730343329999999999984
Q ss_pred HH
Q ss_conf 88
Q gi|254781166|r 239 DF 240 (284)
Q Consensus 239 d~ 240 (284)
T Consensus 211 ~~ 212 (297)
T COG1090 211 NE 212 (297)
T ss_pred CC
T ss_conf 75