HHsearch alignment for GI: 254781166 and conserved domain: KOG1200

>KOG1200 consensus.
Probab=100.00  E-value=0  Score=381.80  Aligned_cols=242  Identities=23%  Similarity=0.274  Sum_probs=221.4

Q ss_pred             HHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHH
Q ss_conf             32299789994889884179999999998898899984898899999999713892899988899999999999999998
Q gi|254781166|r    6 NLMKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFRNLEKE   85 (284)
Q Consensus         6 ~~L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (284)
T Consensus        10 ~r~~sk~~~vtGg~--sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~   87 (256)
T KOG1200          10 QRLMSKVAAVTGGS--SGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKS   87 (256)
T ss_pred             HHHHCCEEEEECCC--CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf             98746224873487--5077999999974696799750322447999862688776523530467578899999999984


Q ss_pred             HCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH--CC--CCCEECCCCCCCCCCCCCHHH
Q ss_conf             47988999627212742125862135899985564026402322346788741--01--221000133323467720124
Q gi|254781166|r   86 WGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLM--NK--GGSMLTLTYLGADKVMPHYNC  161 (284)
Q Consensus        86 ~G~iD~lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m--~~--~G~IInisS~~~~~~~p~~~~  161 (284)
T Consensus        88 ~g~psvlVncAGItrD~~----Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtn  163 (256)
T KOG1200          88 LGTPSVLVNCAGITRDGL----LLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTN  163 (256)
T ss_pred             CCCCCEEEECCCCCCCCC----EEECCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCHH
T ss_conf             299728997576465302----0132488888899751213678889999999971679843886445210245655223


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHH
Q ss_conf             45448999999999999827742379985223872694563189938999999826889987669999999998609887
Q gi|254781166|r  162 MGPAKAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLASSGISDFRYILKWNEYNSPLGRNITHDEVAKSALYLLSDFS  241 (284)
Q Consensus       162 Y~asKaai~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~plgR~g~peeiA~av~fL~Sd~s  241 (284)
T Consensus       164 YAAsK~GvIgftktaArEla~k-nIrvN~VlPGFI~tpMT~~mp~--~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~s  240 (256)
T KOG1200         164 YAASKGGVIGFTKTAARELARK-NIRVNVVLPGFIATPMTEAMPP--KVLDKILGMIPMGRLGEAEEVANLVLFLASDAS  240 (256)
T ss_pred             HHHHCCCEEEEEHHHHHHHHHC-CCEEEEECCCCCCCHHHHHCCH--HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf             4453275553009889988654-8247676143116812544387--899999755876445888998789998815442


Q ss_pred             CCCCCCEEEECCCCC
Q ss_conf             886886899759866
Q gi|254781166|r  242 SGVTGECHYVDAGYH  256 (284)
Q Consensus       242 ~~iTG~~i~vDGG~s  256 (284)
T Consensus       241 sYiTG~t~evtGGl~  255 (256)
T KOG1200         241 SYITGTTLEVTGGLA  255 (256)
T ss_pred             CCCCCEEEEEECCCC
T ss_conf             332151699834634