HHsearch alignment for GI: 254781166 and conserved domain: PRK03369
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=96.88 E-value=0.0085 Score=38.10 Aligned_cols=46 Identities=13% Similarity=0.127 Sum_probs=38.2
Q ss_pred CCCHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Q ss_conf 5123229978999488988417999999999889889998489889999
Q gi|254781166|r 3 VVDNLMKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKR 51 (284)
Q Consensus 3 ~~~~~L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~ 51 (284)
T Consensus 5 ~~~~~~~Gk~V~V~GlG~---sG~a~a~~L~~~G~~v~~~D~~~~~~~~ 50 (487)
T PRK03369 5 MLDPLTPGAPVLVAGAGV---TGRAVLAALTRFGARPTVCDDDPDALRP 50 (487)
T ss_pred CCCCCCCCCEEEEEEECH---HHHHHHHHHHHCCCEEEEEECCCHHHHH
T ss_conf 478657989899991568---3899999999786979999898257799