HHsearch alignment for GI: 254781166 and conserved domain: PRK08993

Probab=100.00  E-value=0  Score=446.65  Aligned_cols=248  Identities=17%  Similarity=0.225  Sum_probs=220.9

Q ss_pred             CCCCHH-CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
Q ss_conf             551232-2997899948898841799999999988988999848988999999997138928999888999999999999
Q gi|254781166|r    2 LVVDNL-MKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFR   80 (284)
Q Consensus         2 ~~~~~~-L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   80 (284)
T Consensus         1 m~~~~~~L~gK~alITGas~--GIG~aia~~la~~Ga~Vv~~~~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   77 (253)
T PRK08993          1 MILDAFSLEGKVAVVTGCDT--GLGQGMALGLAEAGCDIVGINIVEP-TETIEQVTALGRRFLSLTADLRKIDGIPALLE   77 (253)
T ss_pred             CCCCCCCCCCCEEEEECCCC--HHHHHHHHHHHHCCCEEEEECCCCH-HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
T ss_conf             98766399999899938876--8999999999987999999558774-99999999659957999803799999999999


Q ss_pred             HHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH-C--CCCCEECCCCCCCCCCCC
Q ss_conf             9999847988999627212742125862135899985564026402322346788741-0--122100013332346772
Q gi|254781166|r   81 NLEKEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLM-N--KGGSMLTLTYLGADKVMP  157 (284)
Q Consensus        81 ~~~~~~G~iD~lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m-~--~~G~IInisS~~~~~~~p  157 (284)
T Consensus        78 ~~~~~~G~iDilVnnAG~~~~----~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~~~~~~~~G~IvnisS~~~~~~~~  153 (253)
T PRK08993         78 RAVAEFGHIDILVNNAGLIRR----EDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGI  153 (253)
T ss_pred             HHHHHHCCCEEEEECCCCCCC----CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
T ss_conf             999984997299989977889----9801299999999999885443566787689999727788523898610036889


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             01244544899999999999982774237998522387269456318993899999982688998766999999999860
Q gi|254781166|r  158 HYNCMGPAKAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLASSGISDFRYILKWNEYNSPLGRNITHDEVAKSALYLL  237 (284)
Q Consensus       158 ~~~~Y~asKaai~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~plgR~g~peeiA~av~fL~  237 (284)
T Consensus       154 ~~~~Y~asKaal~~ltr~lA~e~a~~-gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~R~g~peeiA~~v~fL~  232 (253)
T PRK08993        154 RVPSYTASKSGVMGVTRLMANEWAKH-NINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLA  232 (253)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHC-CEEEEEEEECCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
T ss_conf             86567999999999999999996233-95999996487867755430379899999995599999819999999999995


Q ss_pred             CHHHCCCCCCEEEECCCCCE
Q ss_conf             98878868868997598661
Q gi|254781166|r  238 SDFSSGVTGECHYVDAGYHI  257 (284)
Q Consensus       238 Sd~s~~iTG~~i~vDGG~s~  257 (284)
T Consensus       233 S~~a~~iTG~~i~VDGG~~a  252 (253)
T PRK08993        233 SSASDYINGYTIAVDGGWLA  252 (253)
T ss_pred             CCHHCCCCCCEEEECCCCCC
T ss_conf             84322825853898957125