HHsearch alignment for GI: 254781166 and conserved domain: PRK09135

Probab=100.00  E-value=0  Score=445.94  Aligned_cols=241  Identities=24%  Similarity=0.297  Sum_probs=213.9

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECC-HHHHHHHHH-HHHC-CCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf             29978999488988417999999999889889998489-889999999-9713-89289998889999999999999999
Q gi|254781166|r    8 MKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQG-DATKKRIEG-LVEG-MDFFMAGHCNVSNSETIDDVFRNLEK   84 (284)
Q Consensus         8 L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~-~~~~~~~~~-~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (284)
T Consensus         4 ~sgKvalVTGas--~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (249)
T PRK09135          4 DSSKVALITGGA--RRIGAAIARTLHAAGYRVAVHYHRSAAEADALAAELNRLRPGSAAALQADLLDPDALEQLVAAAVA   81 (249)
T ss_pred             CCCCEEEEECCC--CHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf             999889996887--589999999999879989998189879999999999850598189998169999999999999999


Q ss_pred             HHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCC-CCCEECCCCCCCCCCCCCHHHHH
Q ss_conf             84798899962721274212586213589998556402640232234678874101-22100013332346772012445
Q gi|254781166|r   85 EWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLMNK-GGSMLTLTYLGADKVMPHYNCMG  163 (284)
Q Consensus        85 ~~G~iD~lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m~~-~G~IInisS~~~~~~~p~~~~Y~  163 (284)
T Consensus        82 ~~G~iDiLVNNAg~~~~----~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~  157 (249)
T PRK09135         82 AFGRLDALVNNASSFYP----TPLGEITEAQWDDLFASNAKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKNYPVYC  157 (249)
T ss_pred             HCCCCCEEEECCCCCCC----CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHH
T ss_conf             83999899989988999----98155999999999998339999999999999874788789998712277889856789


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCC
Q ss_conf             44899999999999982774237998522387269456318993899999982688998766999999999860988788
Q gi|254781166|r  164 PAKAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLASSGISDFRYILKWNEYNSPLGRNITHDEVAKSALYLLSDFSSG  243 (284)
Q Consensus       164 asKaai~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~plgR~g~peeiA~av~fL~Sd~s~~  243 (284)
T Consensus       158 asKaal~~ltr~lA~ela~-~-IrVNaVaPG~i~t~~~~~~~~~-~~~~~~~~~~Pl~R~g~pediA~~v~fLasd-asy  233 (249)
T PRK09135        158 AAKAALEMLTRSLALELAP-E-VRVNAVAPGAILWPENDQGLDA-EARQAILARTPLKRIGTPEDIAEAVLFLLED-ASF  233 (249)
T ss_pred             HHHHHHHHHHHHHHHHHCC-C-CEEEEEECCCCCCCCCCCCCCH-HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC-CCC
T ss_conf             9999999999999999779-9-8899993077367763344999-9999998579999981999999999999656-787


Q ss_pred             CCCCEEEECCCCCEE
Q ss_conf             688689975986613
Q gi|254781166|r  244 VTGECHYVDAGYHIV  258 (284)
Q Consensus       244 iTG~~i~vDGG~s~~  258 (284)
T Consensus       234 iTGq~i~VDGG~slt  248 (249)
T PRK09135        234 ITGQILAVDGGRSLT  248 (249)
T ss_pred             CCCCEEEECCCCCCC
T ss_conf             429848859894576