HHsearch alignment for GI: 254781166 and conserved domain: PRK09242

Probab=100.00  E-value=0  Score=468.24  Aligned_cols=245  Identities=22%  Similarity=0.286  Sum_probs=225.4

Q ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-HC--CCCEEEEECCCCCHHHHHHHHHHHHH
Q ss_conf             2997899948898841799999999988988999848988999999997-13--89289998889999999999999999
Q gi|254781166|r    8 MKDKRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLV-EG--MDFFMAGHCNVSNSETIDDVFRNLEK   84 (284)
Q Consensus         8 L~~K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~-~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (284)
T Consensus         8 L~gK~alITGgs--~GIG~a~a~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   85 (258)
T PRK09242          8 LDGQTALITGAS--KGIGLAIARELLGLGADVLIVARDADALAQARDELAEEFPERELHGLAADVSDDEDRRAILDWVED   85 (258)
T ss_pred             CCCCEEEEECCC--CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHH
T ss_conf             799999994848--689999999999879989999698899999999998644797299999307999999999999999


Q ss_pred             HHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCC--CCCEECCCCCCCCCCCCCHHHH
Q ss_conf             84798899962721274212586213589998556402640232234678874101--2210001333234677201244
Q gi|254781166|r   85 EWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLMNK--GGSMLTLTYLGADKVMPHYNCM  162 (284)
Q Consensus        85 ~~G~iD~lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m~~--~G~IInisS~~~~~~~p~~~~Y  162 (284)
T Consensus        86 ~~g~iDiLVnnAG~~~----~~~~~~~s~~~w~~~~~vNl~~~~~l~~~~~p~m~~~~~G~IInisS~~~~~~~~~~~~Y  161 (258)
T PRK09242         86 HWDGLHILVNNAGGNI----TKAAIDYTEDEWRGIFETNLFSAFELSRYAYPLLKRHAASSIVNIGSVSGLTHVRSGAPY  161 (258)
T ss_pred             HCCCCCEEEECCCCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHCCCCCCCHHH
T ss_conf             7499979998998899----998001999999999999819999999999999997599279999304211689875567


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHC
Q ss_conf             54489999999999998277423799852238726945631899389999998268899876699999999986098878
Q gi|254781166|r  163 GPAKAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLASSGISDFRYILKWNEYNSPLGRNITHDEVAKSALYLLSDFSS  242 (284)
Q Consensus       163 ~asKaai~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~plgR~g~peeiA~av~fL~Sd~s~  242 (284)
T Consensus       162 ~asKaal~~ltr~lA~ela~~-gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fLaSd~s~  240 (258)
T PRK09242        162 GMTKAALQQMTRNLAVEWAED-GIRVNAVAPWYIRTRRTSGPLSDPDYYEQVIERTPMRRIGEPEEVAAAVAFLCLPAAS  240 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHHCC-CEEEEEEEECCCCCHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHC
T ss_conf             999999999999999998027-9899998358898721202237999999998579989987999999999999585324


Q ss_pred             CCCCCEEEECCCCCEEC
Q ss_conf             86886899759866130
Q gi|254781166|r  243 GVTGECHYVDAGYHIVG  259 (284)
Q Consensus       243 ~iTG~~i~vDGG~s~~g  259 (284)
T Consensus       241 ~iTGq~i~VDGG~~~~g  257 (258)
T PRK09242        241 YITGECIAVDGGFLRYG  257 (258)
T ss_pred             CCCCCEEEECCCHHCCC
T ss_conf             75485389890732246