HHsearch alignment for GI: 254781166 and conserved domain: PRK10083

Probab=96.40  E-value=0.027  Score=34.83  Aligned_cols=165  Identities=11%  Similarity=0.148  Sum_probs=83.9

Q ss_pred             HHCCCCEEEEECCCCCCHHHHHHHHHHHH-CCCE-EEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
Q ss_conf             32299789994889884179999999998-8988-999848988999999997138928999888999999999999999
Q gi|254781166|r    6 NLMKDKRGIVLGVANNRSLAWSIAKMCHA-AGAK-VALTWQGDATKKRIEGLVEGMDFFMAGHCNVSNSETIDDVFRNLE   83 (284)
Q Consensus         6 ~~L~~K~~iVtGa~g~~GIG~aiA~~la~-~Ga~-Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (284)
T Consensus       157 ~~~~g~~VlV~G~G---~iGl~~~~~~~~~~ga~~Vi~~d~~~~rl~~A~~~----GAd~vi--~~~-~~~~~~~~~---  223 (339)
T PRK10083        157 GPTEQDVALIYGAG---PVGLTIVQVLKGVYGVKNVIVADRIDERLALAKES----GADWVI--NNA-QESLAEALA---  223 (339)
T ss_pred             CCCCCCEEEEECCC---HHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHC----CCCEEE--CCC-CCCHHHHHH---
T ss_conf             89999889995876---59999999999856997899937989999999971----998998--488-766999998---


Q ss_pred             HHHCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCHHHHH
Q ss_conf             98479889996272127421258621358999855640264023223467887410122100013332346772012445
Q gi|254781166|r   84 KEWGTIDFLVHAIAFSDKAELTGPYINTTRENFLNTMDVSVYSFTALAARASSLMNKGGSMLTLTYLGADKVMPHYNCMG  163 (284)
Q Consensus        84 ~~~G~iD~lInnag~~~~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~k~~~~~m~~~G~IInisS~~~~~~~p~~~~Y~  163 (284)
T Consensus       224 ~~G~~~dvvid~~g~-----------------------------~~~~~~a~~~~~~gG~iv~~G~~~~----~~~i~--  268 (339)
T PRK10083        224 EKGVKPTLIFDAACH-----------------------------PSILEEAVTLASPAARIVLMGFSSE----PSEIV--  268 (339)
T ss_pred             HCCCCCCEEEECCCC-----------------------------HHHHHHHHHHHHCCEEEEEEECCCC----CCCCC--
T ss_conf             539996199966668-----------------------------8999999998518809999925899----87536--


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCHHHHHHHHHHC-CCCCCCC----CHHHHHHHHHHHHC
Q ss_conf             448999999999999827742379985223872694563189938999999826-8899876----69999999998609
Q gi|254781166|r  164 PAKAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLASSGISDFRYILKWNEYN-SPLGRNI----THDEVAKSALYLLS  238 (284)
Q Consensus       164 asKaai~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~-~plgR~g----~peeiA~av~fL~S  238 (284)
T Consensus       269 --------~~-~~---~-~k-~l~i~gs~---~~~------~~~~~~~~li~~g~i~~~~lIt~~f~L~~~~~A~~~~~~  325 (339)
T PRK10083        269 --------QQ-GI---T-GK-ELTIYSSR---LNA------NKFPVVIDWLAKGLIDPEKLITHTFDFQHVADAIELFEK  325 (339)
T ss_pred             --------HH-HH---H-HC-EEEEEECC---CCH------HHHHHHHHHHHCCCCCHHHEEEEEEEHHHHHHHHHHHHC
T ss_conf             --------88-87---4-26-78999922---688------899999999985999915708999898999999999865


Q ss_pred             HHH
Q ss_conf             887
Q gi|254781166|r  239 DFS  241 (284)
Q Consensus       239 d~s  241 (284)
T Consensus       326 ~~~  328 (339)
T PRK10083        326 DQR  328 (339)
T ss_pred             CCC
T ss_conf             998