HHsearch alignment for GI: 254781166 and conserved domain: PRK11730
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed.
Probab=96.52 E-value=0.075 Score=31.94 Aligned_cols=209 Identities=15% Similarity=0.102 Sum_probs=97.8
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH-CCCCEEEEECCCCCHHHHHHHHHHHH-----H
Q ss_conf 78999488988417999999999889889998489889999999971-38928999888999999999999999-----9
Q gi|254781166|r 11 KRGIVLGVANNRSLAWSIAKMCHAAGAKVALTWQGDATKKRIEGLVE-GMDFFMAGHCNVSNSETIDDVFRNLE-----K 84 (284)
Q Consensus 11 K~~iVtGa~g~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~-----~ 84 (284)
T Consensus 314 ~~v~ViGaG~---MG~GIA~~~a~aG~~V~l~D~~~e~l~~g~~~~~~~~~~~--v~~g~~~~~~~~~~l~ri~~~~~~~ 388 (715)
T PRK11730 314 KQAAVLGAGI---MGGGIAYQSASKGVPVIMKDINQKALDLGMNEAAKLLNKQ--VERGRIDGLKMAGVLSTITPTLDYA 388 (715)
T ss_pred CEEEEECCCC---CHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHH--HHCCCCCHHHHHHHHHCCCCCCCCH
T ss_conf 2799978771---0799999999579957999789999999999999999999--8648998799999995687415402
Q ss_pred HHCCCCEEEECCCCCCCCCCCCCCCCCCHHHH---HHHHCCCC-----CHHHHHHHHHHHHHCCCCCEECC--CCCCCCC
Q ss_conf 84798899962721274212586213589998---55640264-----02322346788741012210001--3332346
Q gi|254781166|r 85 EWGTIDFLVHAIAFSDKAELTGPYINTTRENF---LNTMDVSV-----YSFTALAARASSLMNKGGSMLTL--TYLGADK 154 (284)
Q Consensus 85 ~~G~iD~lInnag~~~~~~~~~~~~~~~~e~~---~~~~~vnl-----~~~~~~~k~~~~~m~~~G~IIni--sS~~~~~ 154 (284)
T Consensus 389 ~l~~~DlVIEAV~--E~-------l~~K~~vf~~l~~~~~~~aIlAsNTSsl~i~~lA-~~~~~Per~iG~HFfnP~~~m 458 (715)
T PRK11730 389 GFKDVDVVVEAVV--EN-------PKVKAAVLAEVEQKVREDTILASNTSTISISLLA-KALKRPENFCGMHFFNPVHRM 458 (715)
T ss_pred HHCCCCEEEEECC--CC-------HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHH-HHCCCCCCEEEEEECCCCCCC
T ss_conf 4335888998543--65-------8899999999986558753885157657789999-751682115652214884416
Q ss_pred CCCC-HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHH-----------CCCCHHHHHHHHH--HCCCC
Q ss_conf 7720-12445448999999999999827742379985223872694563-----------1899389999998--26889
Q gi|254781166|r 155 VMPH-YNCMGPAKAALQSAVRYLAMDLGRQSGIRVNALSAGPAKTLASS-----------GISDFRYILKWNE--YNSPL 220 (284)
Q Consensus 155 ~~p~-~~~Y~asKaai~~ltk~lA~elg~~~gIRVN~I~PG~i~T~~~~-----------~~~~~~~~~~~~~--~~~pl 220 (284)
T Consensus 459 ~LVEVv~g~~Ts~~t~~~~~-~~~~~lgK~-pVvv~-d~pGFi~NRil~~~~~ea~~l~~eGa~~~~ID~a~~~~~G~pm 535 (715)
T PRK11730 459 PLVEVIRGEKTSDETIATVV-AYASKMGKT-PIVVN-DCPGFFVNRVLFPYFAGFSQLLRDGADFRQIDKVMEKQFGWPM 535 (715)
T ss_pred CEEEEECCCCCCHHHHHHHH-HHHHHCCCC-EEEEE-CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
T ss_conf 44888168999999999999-999981982-38982-4686058789999999999999879999999999987479977
Q ss_pred CCCCCHHHHHHHHHHHH
Q ss_conf 98766999999999860
Q gi|254781166|r 221 GRNITHDEVAKSALYLL 237 (284)
Q Consensus 221 gR~g~peeiA~av~fL~ 237 (284)
T Consensus 536 GP~~l~D~vGlDv~~~v 552 (715)
T PRK11730 536 GPAYLLDVVGIDTAHHA 552 (715)
T ss_pred CHHHHHHHHCCHHHHHH
T ss_conf 78788763160889999